Literature DB >> 35186361

A digital cardiac disease biomarker from a generative progressive cardiac cine-MRI representation.

Santiago Gómez1, David Romo-Bucheli1, Fabio Martínez1.   

Abstract

Cardiac cine-MRI is one of the most important diagnostic tools used to assess the morphology and physiology of the heart during the cardiac cycle. Nonetheless, the analysis on cardiac cine-MRI is poorly exploited and remains highly dependent on the observer's expertise. This work introduces an imaging cardiac disease representation, coded as an embedding vector, that fully exploits hidden mapping between the latent space and a generated cine-MRI data distribution. The resultant representation is progressively learned and conditioned by a set of cardiac conditions. A generative cardiac descriptor is achieved from a progressive generative-adversarial network trained to produce MRI synthetic images, conditioned to several heart conditions. The generator model is then used to recover a digital biomarker, coded as an embedding vector, following a backpropagation scheme. Then, an UMAP strategy is applied to build a topological low dimensional embedding space that discriminates among cardiac pathologies. Evaluation of the approach is carried out by using an embedded representation as a potential disease descriptor in 2296 pathological cine-MRI slices. The proposed strategy yields an average accuracy of 0.8 to discriminate among heart conditions. Furthermore, the low dimensional space shows a remarkable grouping of cardiac classes that may suggest its potential use as a tool to support diagnosis. The learned progressive and generative representation, from cine-MRI slices, allows retrieves and coded complex descriptors that results useful to discriminate among heart conditions. The cardiac disease representation expressed as a hidden embedding vector could potentially be used to support cardiac analysis on cine-MRI sequences. © Korean Society of Medical and Biological Engineering 2021.

Entities:  

Keywords:  Cardiac patterns emulation; Cine-MRI; Latent space; Progressive GANs

Year:  2021        PMID: 35186361      PMCID: PMC8825913          DOI: 10.1007/s13534-021-00212-w

Source DB:  PubMed          Journal:  Biomed Eng Lett        ISSN: 2093-9868


  10 in total

1.  Image quality assessment: from error visibility to structural similarity.

Authors:  Zhou Wang; Alan Conrad Bovik; Hamid Rahim Sheikh; Eero P Simoncelli
Journal:  IEEE Trans Image Process       Date:  2004-04       Impact factor: 10.856

2.  3D Motion Modeling and Reconstruction of Left Ventricle Wall in Cardiac MRI.

Authors:  Dong Yang; Pengxiang Wu; Chaowei Tan; Kilian M Pohl; Leon Axel; Dimitris Metaxas
Journal:  Funct Imaging Model Heart       Date:  2017-05-23

3.  Contrast agent-free synthesis and segmentation of ischemic heart disease images using progressive sequential causal GANs.

Authors:  Chenchu Xu; Lei Xu; Pavlo Ohorodnyk; Mike Roth; Bo Chen; Shuo Li
Journal:  Med Image Anal       Date:  2020-02-26       Impact factor: 8.545

4.  Heart rate-based window segmentation improves accuracy of classifying posttraumatic stress disorder using heart rate variability measures.

Authors:  Erik Reinertsen; Shamim Nemati; Adriana N Vest; Viola Vaccarino; Rachel Lampert; Amit J Shah; Gari D Clifford
Journal:  Physiol Meas       Date:  2017-05-10       Impact factor: 2.833

5.  Deep Learning for Diagnosis of Chronic Myocardial Infarction on Nonenhanced Cardiac Cine MRI.

Authors:  Nan Zhang; Guang Yang; Zhifan Gao; Chenchu Xu; Yanping Zhang; Rui Shi; Jennifer Keegan; Lei Xu; Heye Zhang; Zhanming Fan; David Firmin
Journal:  Radiology       Date:  2019-04-30       Impact factor: 11.105

6.  A feasibility study of deep learning for predicting hemodynamics of human thoracic aorta.

Authors:  Liang Liang; Wenbin Mao; Wei Sun
Journal:  J Biomech       Date:  2019-11-26       Impact factor: 2.712

Review 7.  State-of-the-Art Deep Learning in Cardiovascular Image Analysis.

Authors:  Geert Litjens; Francesco Ciompi; Jelmer M Wolterink; Bob D de Vos; Tim Leiner; Jonas Teuwen; Ivana Išgum
Journal:  JACC Cardiovasc Imaging       Date:  2019-08

8.  Deep Learning Techniques for Automatic MRI Cardiac Multi-Structures Segmentation and Diagnosis: Is the Problem Solved?

Authors:  Olivier Bernard; Alain Lalande; Clement Zotti; Frederick Cervenansky; Xin Yang; Pheng-Ann Heng; Irem Cetin; Karim Lekadir; Oscar Camara; Miguel Angel Gonzalez Ballester; Gerard Sanroma; Sandy Napel; Steffen Petersen; Georgios Tziritas; Elias Grinias; Mahendra Khened; Varghese Alex Kollerathu; Ganapathy Krishnamurthi; Marc-Michel Rohe; Xavier Pennec; Maxime Sermesant; Fabian Isensee; Paul Jager; Klaus H Maier-Hein; Peter M Full; Ivo Wolf; Sandy Engelhardt; Christian F Baumgartner; Lisa M Koch; Jelmer M Wolterink; Ivana Isgum; Yeonggul Jang; Yoonmi Hong; Jay Patravali; Shubham Jain; Olivier Humbert; Pierre-Marc Jodoin
Journal:  IEEE Trans Med Imaging       Date:  2018-05-17       Impact factor: 10.048

9.  Global, regional, and national age-sex-specific mortality for 282 causes of death in 195 countries and territories, 1980-2017: a systematic analysis for the Global Burden of Disease Study 2017.

Authors: 
Journal:  Lancet       Date:  2018-11-08       Impact factor: 79.321

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.