| Literature DB >> 35143466 |
Matthew E Modes, Michael P Directo, Michael Melgar, Lily R Johnson, Haoshu Yang, Priya Chaudhary, Susan Bartolini, Norling Kho, Paul W Noble, Sharon Isonaka, Peter Chen.
Abstract
In mid-December 2021, the B.1.1.529 (Omicron) variant of SARS-CoV-2, the virus that causes COVID-19, surpassed the B.1.617.2 (Delta) variant as the predominant strain in California.§ Initial reports suggest that the Omicron variant is more transmissible and resistant to vaccine neutralization but causes less severe illness compared with previous variants (1-3). To describe characteristics of patients hospitalized with SARS-CoV-2 infection during periods of Delta and Omicron predominance, clinical characteristics and outcomes were retrospectively abstracted from the electronic health records (EHRs) of adults aged ≥18 years with positive reverse transcription-polymerase chain reaction (RT-PCR) SARS-CoV-2 test results admitted to one academic hospital in Los Angeles, California, during July 15-September 23, 2021 (Delta predominant period, 339 patients) and December 21, 2021-January 27, 2022 (Omicron predominant period, 737 patients). Compared with patients during the period of Delta predominance, a higher proportion of adults admitted during Omicron predominance had received the final dose in a primary COVID-19 vaccination series (were fully vaccinated) (39.6% versus 25.1%), and fewer received COVID-19-directed therapies. Although fewer required intensive care unit (ICU) admission and invasive mechanical ventilation (IMV), and fewer died while hospitalized during Omicron predominance, there were no significant differences in ICU admission or IMV when stratified by vaccination status. Fewer fully vaccinated Omicron-period patients died while hospitalized (3.4%), compared with Delta-period patients (10.6%). Among Omicron-period patients, vaccination was associated with lower likelihood of ICU admission, and among adults aged ≥65 years, lower likelihood of death while hospitalized. Likelihood of ICU admission and death were lowest among adults who had received a booster dose. Among the first 131 Omicron-period hospitalizations, 19.8% of patients were clinically assessed as admitted for non-COVID-19 conditions. Compared with adults considered likely to have been admitted because of COVID-19, these patients were younger (median age = 38 versus 67 years) and more likely to have received at least one dose of a COVID-19 vaccine (84.6% versus 61.0%). Although 20% of SARS-CoV-2-associated hospitalizations during the period of Omicron predominance might be driven by non-COVID-19 conditions, large numbers of hospitalizations place a strain on health systems. Vaccination, including a booster dose for those who are fully vaccinated, remains critical to minimizing risk for severe health outcomes among adults with SARS-CoV-2 infection.Entities:
Mesh:
Year: 2022 PMID: 35143466 PMCID: PMC8830624 DOI: 10.15585/mmwr.mm7106e2
Source DB: PubMed Journal: MMWR Morb Mortal Wkly Rep ISSN: 0149-2195 Impact factor: 17.586
Demographic characteristics, clinical characteristics, and clinical outcomes among 1,076 hospitalized adults with SARS-CoV-2 infection by vaccination status and period of variant predominance — one hospital, California, July 15–September 23, 2021 (Delta period) and December 21, 2021–January 27, 2022 (Omicron period)
| Characteristic | No. (%) | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Total hospitalizations (N = 1,076) | Unvaccinated (n = 657) | Fully vaccinated (n = 377) | |||||||
| Delta period | Omicron period | p-value | Delta period | Omicron period | p-value | Delta period | Omicron period | p-value | |
|
| 339 | 737 | — | 241 | 416 | — | 85 | 292 | — |
|
| |||||||||
| Unvaccinated | 241 (71.1) | 416 (56.4) | <0.01 | 241 (100) | 416 (100) | — | — | — | — |
| At least 1 dose | 98 (28.9) | 321 (43.6) | <0.01 | — | — | — | 85 (100) | 292 (100) | — |
| Fully vaccinated | 85 (25.1) | 292 (39.6) | <0.01 | — | — | — | 85 (100) | 292 (100) | — |
| Fully vaccinated and booster dose | —§ | 70 (9.5) | — | — | — | — | —§ | 70 (24.0) | — |
|
| 60 (43–73) | 66 (49–79) | <0.01 | 54 (38–68) | 64 (48–78) | <0.01 | 71 (5–82) | 69 (51–80) | 0.36 |
|
| |||||||||
| Men | 190 (56.0) | 377 (51.2) | 0.15 | 130 (53.9) | 221 (53.1) | 0.87 | 52 (61.2) | 142 (48.6) | 0.05 |
| Women | 149 (44.0) | 360 (48.8) | 111 (46.1) | 195 (46.9) | 33 (38.8) | 150 (51.4) | |||
|
| |||||||||
| White, non-Hispanic | 163 (48.1) | 336 (45.6) | 0.47 | 105 (43.6) | 184 (44.2) | 0.94 | 53 (62.4) | 136 (46.6) | 0.01 |
| Black, non-Hispanic | 69 (20.4) | 145 (19.7) | 0.81 | 54 (22.4) | 87 (20.9) | 0.69 | 12 (14.1) | 52 (17.8) | 0.51 |
| Hispanic | 56 (16.5) | 157 (21.3) | 0.07 | 45 (18.7) | 87 (20.9) | 0.54 | 9 (10.6) | 64 (21.9) | 0.02 |
| Asian, non-Hispanic | 10 (2.9) | 33 (4.5) | 0.31 | 4 (1.7) | 17 (4.1) | 0.11 | 6 (7.1) | 16 (5.5) | 0.60 |
| Other, non-Hispanic¶ | 41 (12.1) | 66 (9.0) | 0.12 | 33 (13.7) | 41 (9.9) | 0.16 | 5 (5.9) | 24 (8.2) | 0.64 |
|
| |||||||||
| Any | 273 (80.5) | 412 (55.9) | <0.01 | 197 (81.7) | 241 (57.9) | <0.01 | 65 (76.5) | 153 (52.4) | <0.01 |
| Dexamethasone | 245 (72.3) | 360 (48.8) | <0.01 | 178 (73.9) | 216 (51.9) | <0.01 | 57 (67.1) | 129 (44.2) | <0.01 |
| Remdesivir | 234 (69.0) | 293 (39.8) | <0.01 | 170 (70.5) | 173 (41.6) | <0.01 | 54 (63.5) | 106 (36.3) | <0.01 |
| Other therapies** | 76 (22.4) | 92 (12.5) | <0.01 | 47 (19.5) | 58 (13.9) | 0.08 | 23 (27.1) | 30 (10.3) | <0.01 |
|
| 79 (23.3) | 124 (16.8) | 0.01 | 55 (22.8) | 79 (19.0) | 0.27 | 20 (23.5) | 34 (15.3)†† | 0.10 |
|
| 46 (13.6) | 68 (9.2) | 0.03 | 37 (15.4) | 45 (10.8) | 0.11 | 8 (9.4) | 19 (8.6)†† | 0.82 |
|
| 28 (8.3) | 22 (4.0)§§ | 0.01 | 19 (7.9) | 14 (4.9)¶¶ | 0.21 | 9 (10.6) | 6 (3.4)*** | 0.02 |
* Vaccination status was ascertained from the California Immunization Registry. Fully vaccinated adults were those who were not immunocompromised and had received the second dose of a 2-dose COVID-19 vaccine series or a single dose of a 1-dose product ≥14 days before receiving a positive SARS-CoV-2 test result associated with their hospitalization. Immunocompromised adults were considered fully vaccinated if they had received a third dose of a 3-dose primary series or a single dose of a 1-dose product ≥14 days before receiving a positive SARS-CoV-2 test result associated with their hospitalization. Fully vaccinated adults were considered to have received a booster dose if they had received an additional dose (third or fourth) of an mRNA COVID-19 vaccine ≥14 days before receiving a positive SARS-CoV-2 test result associated with their hospitalization. Adults whose positive SARS-CoV-2 test date was ≥14 days after the first dose of a 2-dose series (or second dose of a 3-dose series) but <14 days after receipt of the second dose (or third dose) were considered partially vaccinated, as were those who had received only a single dose of a 2-dose product (or 1 or 2 doses of a 3-dose series). Adults with no documented receipt of any COVID-19 vaccine dose before the test date were considered unvaccinated.
† Partially vaccinated adults were not included in analyses stratified by vaccination status because of small sample size. However, they were included in overall proportions and comparisons not stratified by vaccination status; thus, the total number of patients exceeds the sum of fully vaccinated and unvaccinated patients.
§ Vaccination status was ascertained from the California Immunization Registry. Booster status was unavailable for hospitalizations before December 1, 2021.
¶ Includes Native Hawaiian, other Pacific Islander, American Indian, and Alaska Native persons, and persons of unknown race or ethnicity.
** Includes baricitinib, casirivimab-imdevimab, convalescent plasma, sotrovimab, and tocilizumab.
†† Denominator excludes 70 fully vaccinated patients who also received a booster dose.
§§ Denominator excludes 188 patients who remained hospitalized as of January 27, 2022.
¶¶ Denominator excludes 129 patients who remained hospitalized as of January 27, 2022
*** Denominator excludes 70 fully vaccinated patients who also received a booster dose and 43 patients who remained hospitalized as of January 27, 2022.
FIGUREIntensive care unit admission, use of invasive mechanical ventilation, and death while hospitalized among 737 adults hospitalized with SARS-CoV-2 infection during Omicron variant predominance, by age group and vaccination status*, — one hospital, California, December 21, 2021– January 27, 2022
Abbreviation: ICU = intensive care unit.
* The following were statistically significantly associated with increasing vaccination: ICU admission (all ages); death while hospitalized (age ≥65 years).
† Percentages among partially vaccinated adults were included in analysis but are not displayed because of small sample size.
Demographic and clinical characteristics and clinical outcomes among 131 adults hospitalized with SARS-CoV-2 infection during early Omicron variant predominance, by primary reason for admission — one hospital, California, December 21, 2021–January 2, 2022
| Characteristic | No. (column %) | p-value | ||
|---|---|---|---|---|
| Total hospitalizations (N = 131) | Hospitalizations not likely due to COVID-19 (n = 26) | Hospitalizations likely due to COVID-19 (n = 105) | ||
|
| 63 (38–79) | 38 (29–62) | 67 (47–79) | <0.01 |
|
| ||||
| Men | 61 (46.6) | 11 (42.3) | 50 (47.6) |
|
| Women | 70 (53.4) | 15 (57.7) | 55 (52.4) | 0.67 |
|
| ||||
| White, non-Hispanic | 59 (45.0) | 9 (34.6) | 50 (47.6) | 0.28 |
| Hispanic | 32 (24.4) | 10 (38.5) | 22 (21.0) | 0.08 |
| Black, non-Hispanic | 26 (19.8) | 5 (19.2) | 21 (20.0) | >0.99 |
| Asian, non-Hispanic | 5 (3.8) | 2 (7.7) | 3 (2.9) | 0.26 |
| Other, non-Hispanic* | 9 (6.9) | 0 (—) | 9 (8.6) | 0.20 |
|
| ||||
| Unvaccinated | 45 (34.4) | 4 (15.4) | 41 (39.0) | 0.02 |
| At least 1 dose | 86 (65.6) | 22 (84.6) | 64 (61.0) | 0.02 |
| Fully vaccinated | 80 (61.1) | 20 (76.9) | 60 (57.1) | 0.07 |
| Fully vaccinated and booster dose | 18 (13.7) | 4 (15.4) | 14 (13.3) | 0.76 |
|
| ||||
| Lower respiratory symptoms§ | 68 (51.9) | 1 (3.8) | 67 (63.8) | <0.01 |
| Abnormal chest radiograph¶ | 55 (42.0) | 1 (3.8) | 54 (51.4) | <0.01 |
| Hypoxemia | 41 (31.3) | 0 (—) | 41 (39.0) | <0.01 |
| Fever** | 39 (29.8) | 5 (19.2) | 34 (32.4) | 0.24 |
| Gastrointestinal symptoms†† | 32 (24.4) | 7 (26.9) | 25 (23.8) | 0.80 |
|
| ||||
| Obesity (BMI ≥30) | 46 (35.1) | 8 (30.8) | 38 (36.2) | 0.65 |
| Renal disease | 14 (10.7) | 2 (7.7) | 12 (11.4) | 0.74 |
| Hypertension | 13 (9.9) | 0 (—) | 13 (12.4) | 0.07 |
| Cardiovascular disease§§ | 11 (8.4) | 0 (—) | 11 (10.5) | 0.11 |
| Diabetes mellitus | 6 (4.6) | 0 (—) | 6 (5.7) | 0.60 |
| Chronic pulmonary disease¶¶ | 2 (1.5) | 0 (—) | 2 (1.9) | >0.99 |
|
| ||||
| Any | 73 (55.7) | 4 (15.4) | 69 (65.7) | <0.01 |
| Dexamethasone | 63 (48.1) | 3 (11.5)*** | 60 (57.1) | <0.01 |
| Remdesivir | 51 (38.9) | 2 (7.7)††† | 49 (46.7) | <0.01 |
| Other therapies§§§ | 29 (19.8) | 0 (—) | 26 (24.8) | <0.01 |
|
| 17 (13.0) | 2 (7.7) | 15 (14.3) | 0.52 |
|
| 12 (9.2) | 2 (7.7) | 10 (9.5) | >0.99 |
|
| 2 (1.9)¶¶¶ | 0 (—)**** | 2 (2.4)†††† | >0.99 |
Abbreviation: BMI = body mass index.
* Includes Native Hawaiian, other Pacific Islander, American Indian, and Alaska Native persons, and persons of unknown race or ethnicity.
† Fully vaccinated adults were those who were not immunocompromised and had received the second dose of a 2-dose COVID-19 vaccine series or a single dose of a 1-dose product ≥14 days before receiving a positive SARS-CoV-2 test result associated with their hospitalization. Immunocompromised adults were considered fully vaccinated if they had received a third dose of a 3-dose primary series or a single dose of a 1-dose product ≥14 days before receiving a positive SARS-CoV-2 test result associated with their hospitalization. Fully vaccinated adults were considered to have received a booster dose if they had received an additional (third or fourth) dose of an mRNA COVID-19 vaccine ≥14 days before receiving a positive SARS-CoV-2 test result associated with their hospitalization. Adults whose positive SARS-CoV-2 test date was ≥14 days after the first dose of a 2-dose series (or second dose of a 3-dose series) but <14 days after receipt of the second dose (or third dose) were considered partially vaccinated, as were those who had received only a single dose of a 2-dose product (or 1 or 2 doses of a 3-dose series). Adults with no documented receipt of any COVID-19 vaccine dose before the test date were considered unvaccinated.
§ Includes dyspnea, cough, and wheezing.
¶ Includes presence of opacities or nonspecific densities.
**Either documented temperature >100.4°F (38°C) on admission or identification of fever in a clinical note by the emergency physician or admitting provider.
†† Includes nausea, vomiting, and diarrhea.
§§ Includes coronary artery disease, congestive heart failure, arrhythmias, valvular heart disease, stroke, and peripheral vascular disease.
¶¶ Includes chronic obstructive pulmonary disease, pulmonary fibrosis, and asthma.
*** Dexamethasone was administered for neurosurgical indications (two) and for suspected bacterial meningitis (one).
††† Remdesivir was administered in the setting of difficulty extubating after a gastrointestinal procedure (one) and for unclear indication in a patient admitted for psychiatric care (one).
§§§ Includes baricitinib, casirivimab-imdevimab, convalescent plasma, sotrovimab, and tocilizumab.
¶¶¶ Denominator does not include 25 patients who remained hospitalized as of January 11, 2022.
**** Denominator does not include two patients who remained hospitalized as of January 11, 2022.
†††† Denominator does not include 23 patients who remained hospitalized as of January 11, 2022.