| Literature DB >> 35116742 |
Jing Zhang1,2, Qingtao Qiu1, Jinghao Duan1, Guanzhong Gong1, Qingjun Jiang3, Gang Sun3, Yong Yin1.
Abstract
BACKGROUND: Reliable and meaningful radiomic features is extremely crucial to characterize tumor phenotypes. This study was designed to experimentally evaluate the variability of radiomic features extracted from different b-values diffusion-weighted images (DWIs) in hepatocellular carcinoma (HCC).Entities:
Keywords: Hepatocellular carcinoma (HCC); diffusion-weighted imaging (DWI); radiomic features
Year: 2019 PMID: 35116742 PMCID: PMC8798719 DOI: 10.21037/tcr.2019.01.14
Source DB: PubMed Journal: Transl Cancer Res ISSN: 2218-676X Impact factor: 1.241
Figure 1Flow chart of this study.
Figure 2The %COV absolute value of each radiomic feature across 10 b-values DW image sets.
Groups of 74 radiomic features based on %COV value
| Low (%COV <30) |
| 1-GLCM-IDMN |
| 2-GLCM-IDN |
| 3-GLRLM-SRE |
| 4-GLRLM-R.Percent |
| 5-GLRLM-RLNUN |
| 6-GLSZM-Z.Entropy |
| 7-GLRLM-RLNU |
| 8-GLCM-IMC2 |
| 9-GLCM-Entropy |
| 10-GLRLM-R.Entropy |
| 11-GLRLM-LRE |
| 12-GLSZM-GLNU |
| 13-GLCM-SumEntropy |
| 14-GLSZM-SAE |
| 15-IH-Entropy |
| 16-GLCM-DiffEntropy |
| 17-IH-Kurtosis |
| 18-GLSZM-SZNUN |
| 19-GLCM-ID |
| Moderate (%COV <50) |
| 20-GLSZM-Z.Percent |
| 21-GLCM-InverseVar |
| 22-GLCM-IMC1 |
| 23-GLCM-IDM |
| 24-GLCM-AverInten |
| 25-GLCM-SumAver |
| 26-GLRLM-GLNU |
| 27-IH-MeanAbsDev |
| 28-IH-StandDev |
| 29-IH-RobustAbsDev |
| 30-IH-InterQuarRange |
| 31-GLCM-DiffAver |
| 32-GLSZM-GLNUN |
| 33-IH-Range |
| 34-GLRLM-GLNUN |
| 35-IH-90Percentile |
| 36-IH-Uniformity |
| 37-IH-Maximum |
| 38-IH-RootMeanSqua |
| 39-IH-Mean |
| 40-IH-Median |
| Large (%COV >50) |
| 41-GLSZM-LAHGLE |
| 42-GLSZM-SZNU |
| 43-IH-10Percentile |
| 44-GLCM-MaxProbablity |
| 45-GLRLM-R.Var |
| 46-GLCM-Correlation |
| 47-GLRLM-LRHGLE |
| 48-GLCM-Energy |
| 49-GLSZM-GL.Var |
| 50-IH-Skewness |
| 51-GLSZM-SALGLE |
| 52-GLSZM-HGLZE |
| 53-GLRLM-HGLRE |
| 54-GLCM-AutoCorre |
| 55-GLRLM-SRHGLE |
| 56-GLRLM-GL.Var |
| 57-GLCM-ClusTend |
| 58-GLCM-DiffVar |
| 59-GLRLM-SRLGLE |
| 60-GLCM-SumSqua |
| 61-IH-Variance |
| 62-GLSZM-SAHGLE |
| 63-GLRLM-LGLRE |
| 64-GLCM-Contrast |
| 65-GLSZM-LGLZE |
| 66-IH-Minimum |
| 67-IH-TotalEnergy |
| 68-IH-Energy |
| 69-GLRLM-LRLGLE |
| 70-GLCM-ClusProm |
| 71-GLCM-ClusShade |
| 72-GLSZM-LAE |
| 73-GLSZM-Z.Var |
| 74-GLSZM-LALGLE |
The mean value of 18 radiomic features which shows low variations in HCC and control groups
| Feature | HCC | Control | P | |||
|---|---|---|---|---|---|---|
| Mean | SD | Mean | SD | |||
| 1-GLCM-IDMN | 0.951 | 0.003 | 0.955 | 0.005 | 0.200 | |
| 2-GLCM-IDN | 0.860 | 0.004 | 0.865 | 0.009 | 0.662 | |
| 3-GLRLM-SRE | 0.946 | 0.024 | 0.905 | 0.033 | <0.001 | |
| 4-GLRLM-R.Percent | 0.931 | 0.030 | 0.882 | 0.375 | <0.001 | |
| 5-GLRLM-RLNUN | 0.877 | 0.049 | 0.789 | 0.059 | <0.001 | |
| 6-GLSZM-Z.Entropy | 5.179 | 0.375 | 4.622 | 0.499 | <0.001 | |
| 7-GLRLM-RLNU | 219.213 | 18.645 | 181.472 | 19.906 | <0.001 | |
| 8-GLCM-IMC2 | 0.864 | 0.095 | 0.615 | 0.126 | <0.001 | |
| 9-GLCM-Entropy | 6.233 | 0.744 | 5.156 | 0.787 | <0.001 | |
| 10-GLRLM-R.Entropy | 4.084 | 0.507 | 3.293 | 0.324 | 0.025 | |
| 11-GLRLM-LRE | 1.285 | 0.166 | 1.499 | 0.233 | 0.019 | |
| 12-GLSZM-GLNU | 7.020 | 0.481 | 7.377 | 0.577 | 0.459 | |
| 13-GLCM-SumEntropy | 4.112 | 0.567 | 3.235 | 0.468 | 0.059 | |
| 14-GLSZM-SAE | 0.633 | 0.082 | 0.529 | 0.033 | 0.145 | |
| 15-IH-Entropy | 3.772 | 0.637 | 2.741 | 0.466 | 0.148 | |
| 16-GLCM-DiffEntropy | 3.075 | 0.540 | 2.344 | 0.391 | 0.563 | |
| 18-GLSZM-SZNUN | 0.397 | 0.084 | 0.283 | 0.025 | 0.001 | |
| 19-GLCM-ID | 0.355 | 0.085 | 0.485 | 0.072 | <0.001 | |
HCC, hepatocellular carcinoma.
R2 and r value of fitting results between each feature and different b-values
| Feature | Control | HCC | |||
|---|---|---|---|---|---|
| R2 | r | R2 | r | ||
| 1 | 0.74 | −0.50 | 0.6 | −0.10 | |
| 2 | 0.87 | −0.38 | 0.76 | −0.07 | |
| 3 | 0.86 | −0.74 | 0.95 | −0.67 | |
| 4 | 0.86 | −0.73 | 0.95 | −0.67 | |
| 5 | 0.87 | −0.73 | 0.96 | −0.67 | |
| 6 | 0.92 | −0.81 | 0.98 | −0.49 | |
| 7 | 0.87 | −0.72 | 0.97 | −0.20 | |
| 8 | 0.95 | −0.83 | 0.98 | −0.62 | |
| 9 | 0.9 | −0.79 | 0.98 | −0.50 | |
| 10 | 0.92 | −0.83 | 0.99 | −0.60 | |
| 11 | 0.84 | 0.73 | 0.93 | 0.66 | |
| 12 | 0.61 | −0.33 | 0.85 | 0.1 | |
| 13 | 0.92 | −0.82 | 0.99 | −0.55 | |
| 14 | 0.9 | −0.57 | 0.98 | −0.63 | |
| 15 | 0.91 | −0.81 | 0.99 | −0.63 | |
| 16 | 0.89 | −0.80 | 0.99 | −0.62 | |
| 17 | 0.72 | −0.63 | 0.86 | −0.21 | |
| 18 | 0.81 | −0.56 | 0.98 | −0.64 | |
| 19 | 0.88 | 0.76 | 0.99 | 0.65 | |
| 20 | 0.9 | −0.78 | 0.98 | −0.67 | |
| 21 | 0.85 | 0.77 | 0.99 | 0.64 | |
| 22 | 0.84 | 0.81 | 1 | 0.59 | |
| 23 | 0.88 | 0.76 | 0.99 | 0.65 | |
| 24 | 0.94 | −0.78 | 0.99 | −0.61 | |
| 25 | 0.94 | −0.78 | 0.99 | −0.61 | |
| 26 | 0.91 | 0.77 | 0.99 | 0.52 | |
| 27 | 0.9 | −0.81 | 0.99 | −0.55 | |
| 28 | 0.92 | −0.83 | 0.99 | −0.63 | |
| 29 | 0.89 | −0.79 | 0.99 | −0.62 | |
| 30 | 0.89 | −0.79 | 0.99 | −0.61 | |
| 31 | 0.81 | −0.80 | 0.99 | −0.65 | |
| 32 | 0.94 | 0.82 | 0.99 | 0.62 | |
| 33 | 0.93 | −0.87 | 0.98 | −0.61 | |
| 34 | 0.91 | 0.79 | 0.99 | 0.62 | |
| 35 | 0.95 | −0.85 | 0.99 | −0.64 | |
| 36 | 0.91 | 0.79 | 0.99 | 0.62 | |
| 37 | 0.93 | −0.89 | 0.98 | −0.64 | |
| 38 | 0.95 | −0.83 | 0.99 | −0.64 | |
| 39 | 0.95 | −0.82 | 0.98 | −0.63 | |
| 40 | 0.95 | −0.81 | 0.99 | −0.63 | |
| 41 | 0.68 | 0.55 | 0.69 | 0.15 | |
| 42 | 0.91 | −0.79 | 0.98 | −0.54 | |
| 43 | 0.91 | −0.77 | 0.98 | −0.60 | |
| 44 | 0.9 | 0.74 | 0.98 | 0.55 | |
| 45 | 0.86 | 0.72 | 0.96 | 0.65 | |
| 46 | 0.84 | −0.41 | 0.72 | −0.12 | |
| 47 | 0.92 | −0.78 | 0.98 | −0.60 | |
| 48 | 0.91 | 0.77 | 0.97 | 0.52 | |
| 49 | 0.93 | −0.85 | 0.97 | −0.62 | |
| 50 | 0.5 | −0.20 | 0.38 | −0.10 | |
| 51 | 0.9 | 0.82 | 0.95 | 0.53 | |
| 52 | 0.93 | −0.85 | 0.98 | −0.62 | |
| 53 | 0.93 | −0.80 | 0.99 | −0.62 | |
| 54 | 0.93 | −0.79 | 0.98 | −0.61 | |
| 55 | 0.93 | −0.81 | 0.96 | −0.62 | |
| 56 | 0.92 | −0.84 | 0.98 | −0.63 | |
| 57 | 0.92 | −0.84 | 0.98 | −0.60 | |
| 58 | 0.91 | −0.83 | 0.98 | −0.62 | |
| 59 | 0.85 | 0.73 | 0.98 | 0.53 | |
| 60 | 0.91 | −0.83 | 0.98 | −0.62 | |
| 61 | 0.92 | −0.84 | 0.99 | −0.63 | |
| 62 | 0.93 | −0.86 | 0.98 | −0.63 | |
| 63 | 0.87 | 0.74 | 0.98 | 0.53 | |
| 64 | 0.91 | −0.81 | 0.99 | −0.64 | |
| 65 | 0.93 | 0.82 | 0.98 | 0.57 | |
| 66 | 0.81 | −0.64 | 0.96 | −0.51 | |
| 67 | 0.96 | −0.83 | 0.98 | −0.55 | |
| 68 | 0.96 | −0.83 | 0.98 | −0.55 | |
| 69 | 0.91 | 0.75 | 0.98 | 0.55 | |
| 70 | 0.9 | −0.86 | 0.96 | −0.60 | |
| 71 | 0.86 | −0.42 | 0.94 | −0.20 | |
| 72 | 0.91 | 0.74 | 0.96 | 0.66 | |
| 73 | 0.9 | 0.74 | 0.97 | 0.65 | |
| 74 | 0.92 | 0.75 | 0.92 | 0.65 | |
R2 represents R-square; r represents correlation coefficients.
Figure 3The exponential fitting results or the polynomial fitting results between each feature and different b-values.
Correlation analysis results for each feature in four radiomic features groups
| Feature group | 0.9≤r≤1 | 0.7≤r<0.9 | 0.4≤r<0.7 | 0.2≤r<0.4 | <0.2 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HCC | Con | HCC | Con | HCC | Con | HCC | Con | HCC | Con | |||||
| IH | 0 | 0 | 0 | 16 | 17 | 2 | 1 | 1 | 1 | 0 | ||||
| GLCM | 0 | 0 | 0 | 19 | 19 | 3 | 1 | 1 | 3 | 0 | ||||
| GLRLM | 0 | 0 | 0 | 16 | 15 | 0 | 0 | 0 | 1 | 0 | ||||
| GLSZM | 0 | 0 | 0 | 12 | 14 | 3 | 0 | 1 | 2 | 0 | ||||
Con represents control group.
Figure 4CCC values of radiomic features extracted from nearby b-values DWIs. CCC, concordance correlation coefficient; DWI, diffusion-weighted imaging.