| Literature DB >> 35086537 |
Mater H Mahnashi1, Yahya S Alqahtani1, Bandar A Alyami1, Ali O Alqarni1, Sultan A Alqahl2, Farhat Ullah3, Abdul Sadiq3, Alam Zeb4, Mehreen Ghufran5, Alexey Kuraev6, Asif Nawaz3, Muhammad Ayaz7.
Abstract
BACKGROUND: Natural phenolic compounds and Phenolics-rich medicinal plants are also of great interest in the management of diabetes. The current study was aimed to analyze phenolics in P. hydropiepr L extracts via HPLC-DAD analysis and assess their anti-diabetic potentials using in-vitro and in-silico approaches.Entities:
Keywords: Diabetes; HPLC-DAD analysis; Molecular docking; P. hydropiper; Phenolics; Saponins
Mesh:
Substances:
Year: 2022 PMID: 35086537 PMCID: PMC8793238 DOI: 10.1186/s12906-022-03510-7
Source DB: PubMed Journal: BMC Complement Med Ther ISSN: 2662-7671
Phenolic profile of Ph.Cme extract (mg/g)
| Peak | Rt (min) | Identity | Mean Composition (mg/g) of sample | STD |
|---|---|---|---|---|
| 1 | 1 | Hydroxybenzoic acid | ||
| 2 | 2.1 | Gallic acid | ||
| 3 | 4.9 | Hydroxybenzoylhexose | ||
| 4 | 5.6 | Caffeic acid | ||
| 5 | 8.4 | Syringic Acid | ||
| 6 | 10.7 | p-Coumaric acid | ||
| 7 | 11.5 | 5-Coumaroylquinic acid | ||
| 8 | 14.5 | 3-Caffeoylquinic acid | ||
| 9 | 15.5 | 3-Coumaroylquinic Acid | ||
| 10 | 17.2 | p-Coumaroylhexose | ||
| 11 | 20.8 | p-Coumaroylhexose-4-hexoside | ||
| 12 | 23.7 | 4-Caffeoylquinic acid | ||
| 13 | 24.1 | 5-Feruloylquinic acid | ||
| 14 | 25.7 | Kaemferol-3-(p-coumaroyl-diglucoside)-7-glucoside | ||
| 15 | 26.4 | Ellagic acid | ||
| 16 | 27.3 | Quercetin | ||
| 17 | 27.9 | Quercetin-3-glucoronide | ||
| 18 | 31.6 | 5,7-dihydroxy-4′-methoxyflavone | ||
| 19 | 33.6 | 5,7,3′-Trihydroxy-3,6,4′,5′-tetramethoxyflavone | ||
| 20 | 35.4 | Cyanidin-3-glucoside | ||
| 21 | 36.7 | Delphinidin-3-glucoside | ||
| 22 | 39.6 | Quercetin-3-hexoside | ||
| 23 | 43.1 | Malvidin-3-glucoside | ||
| 24 | 45.9 | Cyanidin-3-rutinoside |
Standard compounds used were; Hydroxybenzoic acid, Gallic acid, Caffeic acid, Syringic acid, p-coumaric acid, 3-Caffeoylquinic acid, Quercetin, Ellagic acid and Cyanidin-3-glucoside
Fig. 1Chromatogram of the HPLC-DAD analysis of Ph.Cme. Peak numbers represent individual compounds and their details are provided in Table 1
Results of α-glucosidase and α-amylase inhibitory potentials of Persicaria hydropiper
| Samples | α-glucosidase assay | α-amylase assay | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Conc. | % Inhibition | IC50 μg/mL | Sample | Conc. | % Inhibition | IC50 μg/mL | Sample | % Inhibition | IC50 μg/mL | Samples | % Inhibition | IC50 μg/mL | |
| Ph.Cr | 1000 500 250 125 62.5 31.25 | 67.33 ± 1.52* 51.86 ± 3.09*** 42.50 ± 1.32*** 35.20 ± 2.52*** 29.66 ± 2.56*** 25.50 ± 1.32*** | 400 | Ph.Bt | 1000 500 250 125 62.5 31.25 | 49.67 ± 1.52*** 43.00 ± 1.73*** 38.67 ± 0.57*** 32.00 ± 0.00*** 24.00 ± 0.00*** 19.20 ± 2.25*** | 1000 | Ph.Cr | 70.89 ± 0.55** 59.93 ± 1.45** 51.02 ± 0.78* 43.83 ± 0.38 ns 32.56 ± 2.12* 19.55 ± 1.56** | 200 | Ph.Bt | 57.58 ± 0.15ns 51.68 ± 2.33* 33.90 ± 1.22*** 20.17 ± 0.88*** 11.55 ± 2.50*** 05.40 ± 1.90*** | 550 |
| Ph.Hex | 1000 500 250 125 62.5 31.25 | 32.66 ± 2.52*** 26.16 ± 2.75*** 21.50 ± 1.32*** 17.73 ± 0.51*** 15.69 ± 1.04*** 11.93 ± 1.61*** | 1800 | Ph.Aq | 1000 500 250 125 62.5 31.25 | 53.83 ± 1.04*** 45.00 ± 1.00*** 41.86 ± 3.09*** 34.33 ± 2.02*** 30.36 ± 0.57** 22.00 ± 0.00** | 700 | Ph.Hex | 55.78 ± 0.55*** 42.33 ± 1.10*** 29.00 ± 2.41*** 12.88 ± 0.91*** 07.96 ± 2.44*** 03.63 ± 1.91*** | 750 | Ph.Aq | 41.99 ± 2.40** 35.71 ± 3.20*** 26.21 ± 1.50*** 15.00 ± 0.62*** 10.94 ± 2.86** 4.99 ± 1.00*** | 920 |
| Ph.Chf | 1000 500 250 125 62.5 31.25 | 66.44 ± 1.50* 54.73 ± 0.51*** 47.23 ± 1.05*** 40.16 ± 1.02* 34.50 ± 1.32 ns 29.00 ± 0.00 | 320 | Ph.Sp | 1000 500 250 125 62.5 31.25 | 71.50 ± 0.28 ns 65.00 ± 0.86* 58.00 ± 0.28* 51.00 ± 1.15 ns 39.00 ± 0.00 ns 30.36 ± 0.57* | 100 | Ph.Chf | 87.32 ± 2.45* 77.54 ± 0.87ns 68.49 ± 1.33 ns 60.95 ± 2.40 ns 48.97 ± 0.51 ns 27.88 ± 1.20** | 90 | Ph.Sp | 90.06 ± 0.45 ns 80.13 ± 1.77 ns 68.83 ± 0.64 ns 58.56 ± 0.84 ns 47.26 ± 2.35 ns 29.33 ± 1.68** | 100 |
| Ph.EtAc | 1000 500 250 125 62.5 31.25 | 55.00 ± 1.00*** 43.60 ± 1.76*** 34.00 ± 1.00*** 28.20 ± 1.04*** 22.00 ± 0.00*** 17.00 ± 1.00*** | 680 | P.C | 1000 500 250 125 62.5 31.25 | 77.30 ± 0.61 73.00 ± 0.00 69.00 ± 0.00 55.50 ± 1.04 49.83 ± 0.44 41.00 ± 0.00 | 18 | Ph.EtAc | 68.00 ± 0.51ns 49.60 ± 2.23* 37.95 ± 0.77** 21.40 ± 2.25** 15.86 ± 1.33*** 09.71 ± 2.55*** | 480 | P.C | 77.30 ± 0.61 73.00 ± 0.00 69.00 ± 0.00 55.50 ± 1.04 49.83 ± 0.44 41.00 ± 0.00 | 18 |
Results were expressed as % inhibition (mean ± SEM of n = 3) and IC50. Values significantly different as compare to standard drug (Acarbose), *: p < 0.05, **: p < 0.01, ***: p < 0.001. ns: Results not significantly different in comparison to standard drug. P.C = Acarbose
Results of molecular docking studies with the identified compounds against α-glucosidase
| S. No | Ligand | Receptor | Interaction | Distance | E (kcal/mol) | Docking score | |||
|---|---|---|---|---|---|---|---|---|---|
| 1 | O | 14 | ND2 | ASN | 347 | H-acceptor | 3.29 | −2.9 | −7.43843651 |
| O | 15 | ND2 | ASN | 347 | H-acceptor | 3.02 | −2.4 | ||
| 2 | O | 9 | OE2 | GLU | 276 | H-donor | 2.58 | −1.2 | −11.3185654 |
| O | 13 | O | ASP | 349 | H-donor | 2.77 | −1.9 | ||
| O | 18 | NH1 | ARG | 439 | H-acceptor | 2.74 | −3 | ||
| 3 | O | 33 | OE1 | GLN | 350 | H-donor | 3.04 | −0.6 | −9.3436832 |
| O | 24 | ND2 | ASN | 347 | H-acceptor | 3.24 | −1.3 | ||
| O | 24 | 6-ring | PHE | 300 | H-pi | 3.36 | −0.5 | ||
| 4 | O | 12 | OD2 | ASP | 408 | H-donor | 2.99 | −2 | −10.572752 |
| O | 19 | NE2 | HIS | 111 | H-acceptor | 3.27 | −3.5 | ||
| O | 20 | NH1 | ARG | 212 | H-acceptor | 3.29 | − 2.9 | ||
| O | 20 | NH2 | ARG | 212 | H-acceptor | 3.15 | −2.1 | ||
| O | 20 | NH1 | ARG | 212 | ionic | 3.29 | −2.8 | ||
| O | 20 | NH2 | ARG | 212 | ionic | 3.15 | −3.6 | ||
| 5 | O | 14 | ND2 | ASN | 347 | H-acceptor | 2.93 | −3.4 | −8.25566006 |
| C | 16 | 6-ring | PHE | 300 | H-pi | 3.99 | −0.5 | ||
| 6 | O | 18 | NE2 | HIS | 348 | H-acceptor | 2.99 | −0.8 | −7.69557381 |
| 7 | O | 18 | OE1 | GLN | 350 | H-donor | 3.36 | −0.6 | −9.5489674 |
| O | 22 | OE1 | GLN | 350 | H-donor | 3.06 | −2.5 | ||
| O | 41 | 5-ring | HIS | 279 | H-pi | 3.6 | − 2.6 | ||
| 8 | C | 5 | O | ASP | 349 | H-donor | 3.21 | −0.1 | −18.5305271 |
| O | 17 | OE1 | GLN | 350 | H-donor | 2.77 | −2 | ||
| C | 43 | OD2 | ASP | 349 | H-donor | 3.78 | −0.1 | ||
| C | 45 | OE1 | GLU | 276 | H-donor | 3.86 | −0.1 | ||
| C | 52 | OD2 | ASP | 68 | H-donor | 3.21 | −0.2 | ||
| O | 56 | OD2 | ASP | 68 | H-donor | 2.79 | −6.8 | ||
| O | 19 | CD2 | PHE | 300 | H-acceptor | 3.17 | −0.1 | ||
| O | 41 | ND2 | ASN | 347 | H-acceptor | 3.35 | −0.1 | ||
| O | 16 | NH2 | ARG | 312 | ionic | 2.76 | −6.3 | ||
| −6 | ring | CZ | PHE | 177 | pi-H | 4.24 | −0.1 | ||
| −6 | ring | NH1 | ARG | 439 | pi-cation | 4.27 | −0.4 | ||
| 9 | C | 26 | OD1 | ASP | 214 | H-donor | 3.52 | −0.2 | −13.9830008 |
| C | 30 | OD1 | ASP | 214 | H-donor | 3.7 | −0.1 | ||
| O | 35 | OD2 | ASP | 349 | H-donor | 2.89 | −3.7 | ||
| O | 40 | OE1 | GLN | 181 | H-donor | 3.57 | −0.1 | ||
| O | 35 | NH1 | ARG | 439 | H-acceptor | 2.86 | −0.3 | ||
| O | 38 | NE2 | HIS | 348 | H-acceptor | 2.78 | −5.9 | ||
| O | 39 | NE2 | HIS | 348 | H-acceptor | 2.89 | −2.1 | ||
| O | 40 | NE2 | HIS | 111 | H-acceptor | 3.1 | −1.6 | ||
| O | 38 | NH1 | ARG | 212 | ionic | 3.25 | −3 | ||
| O | 38 | NH2 | ARG | 212 | ionic | 2.91 | −5.1 | ||
| O | 39 | NH2 | ARG | 212 | ionic | 3.31 | − 2.7 | ||
| C | 26 | 6-ring | TYR | 71 | H-pi | 4.79 | −0.1 | ||
| O | 33 | 6-ring | PHE | 177 | H-pi | 3.06 | −0.2 | ||
| 10 | C | 5 | O | ASP | 349 | H-donor | 3.34 | −0.4 | −13.088253 |
| O | 22 | OE1 | GLN | 350 | H-donor | 3.06 | −0.2 | ||
| C | 32 | OD2 | ASP | 68 | H-donor | 3.16 | −0.2 | ||
| O | 40 | OE1 | GLN | 181 | H-donor | 2.72 | −1.6 | ||
| O | 22 | CG2 | VAL | 303 | H-acceptor | 3.26 | −0.1 | ||
| C | 35 | 6-ring | PHE | 177 | H-pi | 3.49 | −0.1 | ||
| −6 | ring | NE2 | HIS | 111 | pi-H | 3.91 | −0.1 | ||
| 11 | C | 26 | O | PHE | 157 | H-donor | 3.55 | −0.1 | −13.8564711 |
| C | 41 | OD2 | ASP | 408 | H-donor | 3.37 | −0.3 | ||
| O | 21 | CE1 | PHE | 177 | H-acceptor | 3.78 | −0.1 | ||
| O | 35 | N | ARG | 312 | H-acceptor | 3.4 | −0.3 | ||
| O | 45 | CB | ARG | 312 | H-acceptor | 3.64 | −0.1 | ||
| O | 45 | NE | ARG | 312 | H-acceptor | 3.12 | −1.9 | ||
| O | 64 | CD1 | PHE | 158 | H-acceptor | 3.78 | −0.1 | ||
| O | 64 | CE1 | PHE | 158 | H-acceptor | 3.8 | −0.1 | ||
| O | 64 | CD1 | PHE | 177 | H-acceptor | 3.26 | −0.1 | ||
| C | 1 | 6-ring | PHE | 157 | H-pi | 4.44 | −0.1 | ||
| C | 3 | 6-ring | PHE | 157 | H-pi | 4.44 | −0.1 | ||
| −6 | ring | NH1 | ARG | 439 | pi-cation | 3.14 | −0.1 | ||
| 12 | C | 4 | OD1 | ASP | 214 | H-donor | 3.49 | −0.1 | −15.2827396 |
| O | 10 | OE1 | GLN | 181 | H-donor | 2.78 | −2.4 | ||
| C | 23 | O | ASP | 349 | H-donor | 3.61 | −0.1 | ||
| O | 20 | NH2 | ARG | 212 | H-acceptor | 3.15 | −0.8 | ||
| O | 20 | CZ | PHE | 300 | H-acceptor | 3.89 | −0.1 | ||
| O | 39 | NE | ARG | 312 | H-acceptor | 2.92 | −0.9 | ||
| O | 39 | NH2 | ARG | 312 | H-acceptor | 2.94 | −0.5 | ||
| O | 40 | CD | ARG | 312 | H-acceptor | 3.22 | −0.1 | ||
| O | 39 | NE | ARG | 312 | ionic | 2.92 | −5.1 | ||
| O | 39 | NH2 | ARG | 312 | ionic | 2.94 | −4.9 | ||
| O | 40 | NE | ARG | 312 | ionic | 2.97 | −4.7 | ||
| −6 | ring | NE2 | HIS | 111 | pi-H | 4.84 | −0.1 | ||
| 13 | C | 3 | OD1 | ASP | 214 | H-donor | 3.16 | − 0.3 | −12.4345493 |
| O | 16 | OD1 | ASP | 214 | H-donor | 2.8 | −5.3 | ||
| O | 42 | OE2 | GLU | 304 | H-donor | 2.75 | −3.7 | ||
| O | 42 | CD2 | PHE | 300 | H-acceptor | 3.68 | −0.1 | ||
| O | 42 | CD | ARG | 312 | H-acceptor | 3.1 | −0.1 | ||
| O | 44 | NE2 | HIS | 245 | H-acceptor | 2.91 | −7.1 | ||
| O | 44 | CD2 | HIS | 279 | H-acceptor | 3.23 | −0.3 | ||
| O | 45 | CD2 | LEU | 218 | H-acceptor | 4.03 | −0.1 | ||
| O | 45 | NE2 | HIS | 245 | H-acceptor | 3.38 | −1.1 | ||
| O | 39 | 6-ring | PHE | 157 | H-pi | 4.32 | −0.4 | ||
| 14 | O | 42 | OD1 | ASP | 214 | H-donor | 3.41 | −0.1 | − 19.8089981 |
| C | 22 | OE1 | GLU | 276 | H-donor | 3.45 | −0.5 | ||
| O | 27 | OD2 | ASP | 408 | H-donor | 2.98 | −1 | ||
| C | 31 | OE1 | GLN | 181 | H-donor | 3.43 | −0.1 | ||
| O | 40 | O | TYR | 71 | H-donor | 2.59 | −1 | ||
| O | 44 | OE2 | GLU | 276 | H-donor | 2.96 | −0.6 | ||
| O | 53 | OD2 | ASP | 349 | H-donor | 2.62 | −3.6 | ||
| C | 64 | O | VAL | 303 | H-donor | 3.36 | −0.1 | ||
| O | 21 | CE2 | PHE | 300 | H-acceptor | 3.68 | −0.1 | ||
| O | 42 | NH2 | ARG | 212 | H-acceptor | 2.98 | −1.6 | ||
| O | 44 | CZ | PHE | 300 | H-acceptor | 3.7 | −0.1 | ||
| O | 53 | NH1 | ARG | 439 | H-acceptor | 2.72 | −0.7 | ||
| O | 55 | CD | ARG | 439 | H-acceptor | 3.14 | −0.2 | ||
| O | 68 | OH | TYR | 344 | H-acceptor | 2.96 | −0.5 | ||
| −6 | ring | CE1 | PHE | 158 | pi-H | 3.35 | −0.2 | ||
| −6 | ring | CG | GLN | 350 | pi-H | 3.54 | −0.2 | ||
| −6 | ring | 6-ring | PHE | 177 | pi-pi | 3.13 | 0 | ||
| −6 | ring | 6-ring | PHE | 300 | pi-pi | 3.97 | 0 | ||
| 15 | O | 23 | OD2 | ASP | 68 | H-donor | 2.63 | −7 | −15.9700079 |
| O | 25 | O | ASP | 349 | H-donor | 2.66 | −4.3 | ||
| O | 14 | NE2 | HIS | 348 | H-acceptor | 3.25 | −0.1 | ||
| O | 19 | ND2 | ASN | 347 | H-acceptor | 2.86 | −3.7 | ||
| O | 23 | NE2 | HIS | 111 | H-acceptor | 3.44 | −0.2 | ||
| −6 | ring | CD | ARG | 439 | pi-H | 4.04 | −0.2 | ||
| 16 | O | 24 | OE1 | GLN | 181 | H-donor | 2.88 | −2.5 | −12.9178295 |
| O | 23 | NE2 | HIS | 111 | H-acceptor | 3.03 | −0.7 | ||
| O | 23 | CG2 | THR | 215 | H-acceptor | 3.53 | −0.1 | ||
| O | 26 | CE2 | PHE | 300 | H-acceptor | 4.05 | −0.1 | ||
| −6 | ring | 6-ring | PHE | 177 | pi-pi | 3.8 | 0 | ||
| 17 | O | 29 | OD2 | ASP | 408 | H-donor | 2.75 | −2.2 | −17.0351429 |
| O | 29 | OD1 | ASP | 408 | H-donor | 3.44 | −0.1 | ||
| O | 44 | O | ASP | 349 | H-donor | 2.97 | −1.4 | ||
| O | 23 | NE2 | HIS | 245 | H-acceptor | 3.22 | −2.2 | ||
| O | 26 | ND2 | ASN | 241 | H-acceptor | 2.93 | −1 | ||
| O | 48 | ND2 | ASN | 347 | H-acceptor | 2.93 | −2.6 | ||
| O | 26 | ND1 | HIS | 279 | ionic | 3.88 | −0.8 | ||
| O | 26 | NE2 | HIS | 279 | ionic | 3.7 | −1.2 | ||
| O | 50 | NH1 | ARG | 439 | ionic | 3.36 | −2.5 | ||
| O | 48 | 6-ring | PHE | 300 | H-pi | 3.32 | −0.2 | ||
| −6 | ring | 5-ring | HIS | 279 | pi-pi | 3.91 | 0 | ||
| 18 | C | 10 | OD2 | ASP | 349 | H-donor | 3.45 | −0.8 | −13.8796387 |
| C | 19 | OD1 | ASN | 347 | H-donor | 3.6 | −0.1 | ||
| O | 29 | OE1 | GLN | 181 | H-donor | 2.79 | −3.8 | ||
| O | 26 | NH1 | ARG | 212 | H-acceptor | 3.2 | −0.3 | ||
| O | 26 | NH2 | ARG | 212 | H-acceptor | 2.87 | −0.8 | ||
| O | 26 | NE2 | HIS | 348 | H-acceptor | 3.34 | −1.6 | ||
| O | 27 | CG2 | VAL | 108 | H-acceptor | 3.54 | −0.1 | ||
| C | 17 | 5-ring | HIS | 348 | H-pi | 4.44 | −1.4 | ||
| −6 | ring | NE2 | HIS | 111 | pi-H | 4.45 | −0.1 | ||
| 19 | O | 43 | OD1 | ASP | 408 | H-donor | 3.32 | −0.8 | −16.4973335 |
| O | 25 | NE | ARG | 312 | ionic | 3.65 | −1.4 | ||
| O | 25 | NH1 | ARG | 312 | ionic | 2.9 | −5.1 | ||
| C | 21 | 6-ring | PHE | 300 | H-pi | 3.73 | −0.3 | ||
| C | 29 | 5-ring | HIS | 279 | H-pi | 4.66 | −0.2 | ||
| −6 | ring | CD | ARG | 312 | pi-H | 3.45 | −0.1 | ||
| 20 | C | 29 | OD2 | ASP | 408 | H-donor | 3.35 | −0.8 | − 18.9063892 |
| O | 43 | OD1 | ASP | 408 | H-donor | 3.63 | −0.1 | ||
| O | 45 | OD2 | ASP | 408 | H-donor | 3.02 | −1.2 | ||
| O | 47 | O | PHE | 157 | H-donor | 3.13 | −1.3 | ||
| O | 45 | CE1 | TYR | 313 | H-acceptor | 3.37 | −0.2 | ||
| O | 45 | CD | ARG | 439 | H-acceptor | 3.51 | − 0.2 | ||
| C | 22 | 6-ring | PHE | 157 | H-pi | 3.81 | −0.8 | ||
| −6 | ring | NH1 | ARG | 439 | pi-cation | 4.19 | −0.1 | ||
| −6 | ring | 6-ring | PHE | 177 | pi-pi | 3.94 | 0 | ||
| 21 | O | 44 | OE1 | GLU | 276 | H-donor | 2.98 | −1.5 | −17.2185078 |
| O | 50 | OE2 | GLU | 304 | H-donor | 2.7 | −3.3 | ||
| O | 52 | OD2 | ASP | 408 | H-donor | 2.83 | −2.9 | ||
| O | 44 | CG2 | THR | 215 | H-acceptor | 3.28 | −0.1 | ||
| O | 44 | CE2 | PHE | 300 | H-acceptor | 3.55 | −0.1 | ||
| −6 | ring | N | ARG | 312 | pi-H | 4.7 | −0.2 | ||
| −6 | ring | CB | ARG | 312 | pi-H | 3.76 | −0.1 | ||
| −6 | ring | CD | ARG | 312 | pi-H | 4.37 | − 0.5 | ||
| 22 | C | 20 | OD2 | ASP | 408 | H-donor | 3.25 | −0.6 | −18.1408939 |
| C | 22 | OD1 | ASN | 347 | H-donor | 3.34 | −0.3 | ||
| O | 32 | OD2 | ASP | 408 | H-donor | 2.97 | −4.7 | ||
| O | 46 | OE2 | GLU | 276 | H-donor | 3.03 | −0.6 | ||
| O | 38 | NH2 | ARG | 212 | H-acceptor | 2.98 | −0.4 | ||
| O | 38 | NE2 | HIS | 348 | H-acceptor | 3.15 | −5.8 | ||
| O | 44 | ND2 | ASN | 347 | H-acceptor | 2.95 | −2.2 | ||
| O | 38 | NH1 | ARG | 212 | ionic | 3.6 | −1.5 | ||
| O | 38 | NH2 | ARG | 212 | ionic | 2.98 | −4.6 | ||
| C | 6 | 6-ring | PHE | 177 | H-pi | 3.96 | −0.6 | ||
| C | 24 | 6-ring | PHE | 300 | H-pi | 3.6 | −0.1 | ||
| C | 39 | 5-ring | HIS | 348 | H-pi | 3.98 | −0.3 | ||
| −6 | ring | CB | PHE | 157 | pi-H | 4.63 | −0.4 | ||
| −6 | ring | CE1 | PHE | 177 | pi-H | 3.41 | −0.4 | ||
| −6 | ring | NH2 | ARG | 212 | pi-cation | 4.71 | −0.1 | ||
| 23 | O | 46 | OD2 | ASP | 68 | H-donor | 2.8 | −1.8 | −16.2608795 |
| O | 48 | OD2 | ASP | 68 | H-donor | 3.1 | −2.6 | ||
| O | 52 | OD1 | ASP | 214 | H-donor | 2.65 | −2.4 | ||
| C | 55 | OE2 | GLU | 276 | H-donor | 3.31 | −0.3 | ||
| O | 14 | CE2 | PHE | 300 | H-acceptor | 3.64 | −0.1 | ||
| O | 46 | CZ | PHE | 158 | H-acceptor | 3.67 | −0.1 | ||
| O | 46 | NH1 | ARG | 439 | H-acceptor | 3.02 | −2.6 | ||
| O | 46 | NH2 | ARG | 439 | H-acceptor | 2.92 | −2.8 | ||
| O | 52 | CG2 | THR | 215 | H-acceptor | 3.78 | −0.1 | ||
| C | 35 | 6-ring | PHE | 177 | H-pi | 3.6 | −0.3 | ||
| C | 55 | 6-ring | PHE | 300 | H-pi | 4.77 | − 0.1 | ||
| 24 | C | 2 | OE1 | GLN | 350 | H-donor | 3.49 | −0.3 | −18.0597305 |
| O | 24 | OD2 | ASP | 68 | H-donor | 3.06 | −1.2 | ||
| C | 38 | O | PHE | 157 | H-donor | 3.67 | −0.1 | ||
| C | 42 | OD2 | ASP | 408 | H-donor | 3.11 | −0.1 | ||
| C | 65 | O | PRO | 309 | H-donor | 3.57 | −0.1 | ||
| O | 71 | OD1 | ASN | 241 | H-donor | 3.05 | −0.2 | ||
| O | 35 | CE1 | PHE | 177 | H-acceptor | 3.79 | −0.1 | ||
| O | 69 | ND2 | ASN | 241 | H-acceptor | 3.04 | −1.5 | ||
| O | 71 | ND2 | ASN | 241 | H-acceptor | 2.93 | −0.6 | ||
| C | 18 | 6-ring | PHE | 177 | H-pi | 3.95 | − 0.1 | ||
| O | 26 | 6-ring | PHE | 177 | H-pi | 3.14 | −0.1 | ||
| C | 44 | 6-ring | PHE | 157 | H-pi | 4.48 | −0.7 | ||
| C | 54 | 6-ring | PHE | 157 | H-pi | 3.99 | −0.2 | ||
| −6 | ring | NH1 | ARG | 439 | pi-cation | 3.66 | −0.1 | ||
Fig. 2Molecular docking conformations of compound 14 against α-glucosidase
Fig. 3Docking conformation of compound 24 in the active site of α-amylase
Results of molecular docking studies with the identified compounds against α-amylase
| S. No | Ligand | Receptor | Interaction | Distance | E (kcal/mol) | Docking score | ||||
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | O | 16 | NE2 | HIS | 299 | (A) | H-acceptor | 2.88 | −3.7 | −7.69861555 |
| 2 | O | 18 | NH2 | ARG | 195 | (A) | H-acceptor | 2.92 | −1.9 | −8.24910164 |
| O | 18 | NE2 | HIS | 299 | (A) | H-acceptor | 3.45 | −0.8 | ||
| O | 9 | 6-ring | TRP | 58 | (A) | H-pi | 4.64 | −0.7 | ||
| 3 | O | 24 | OH | TYR | 151 | (A) | H-acceptor | 3.06 | −0.3 | −9.24960327 |
| O | 24 | NE2 | HIS | 201 | (A) | H-acceptor | 3.15 | −1.1 | ||
| 4 | O | 20 | NE2 | GLN | 63 | (A) | H-acceptor | 3.1 | −1.8 | −7.81459236 |
| −6 | ring | CZ3 | TRP | 58 | (A) | pi-H | 4.05 | −0.1 | ||
| −6 | ring | CH2 | TRP | 58 | (A) | pi-H | 4.17 | −0.1 | ||
| 5 | O | 12 | NE2 | HIS | 299 | (A) | H-acceptor | 3.11 | −1.1 | −8.02968025 |
| O | 13 | CZ3 | TRP | 58 | (A) | H-acceptor | 3.83 | −0.1 | ||
| O | 13 | NE2 | HIS | 299 | (A) | H-acceptor | 2.97 | −6.9 | ||
| O | 12 | NH2 | ARG | 195 | (A) | ionic | 3.23 | −3.1 | ||
| 6 | O | 18 | NE2 | HIS | 101 | (A) | H-acceptor | 3.23 | −3.3 | −6.82410812 |
| O | 19 | NH2 | ARG | 195 | (A) | H-acceptor | 3.4 | −1.1 | ||
| O | 19 | NH2 | ARG | 195 | (A) | ionic | 3.4 | −2.3 | ||
| 7 | O | 18 | O | TYR | 62 | (A) | H-donor | 3.25 | −0.5 | −10.6273155 |
| O | 22 | O | TYR | 62 | (A) | H-donor | 2.95 | −0.9 | ||
| O | 16 | CH2 | TRP | 58 | (A) | H-acceptor | 3.73 | −0.1 | ||
| −6 | ring | CG2 | THR | 163 | (A) | pi-H | 3.86 | −0.3 | ||
| 8 | O | 17 | OD1 | ASP | 197 | (A) | H-donor | 3.02 | −3 | −11.8703232 |
| O | 39 | OD1 | ASP | 356 | (A) | H-donor | 3.32 | −0.3 | ||
| O | 16 | NH2 | ARG | 195 | (A) | H-acceptor | 2.96 | −1.7 | ||
| O | 16 | N | ALA | 198 | (A) | H-acceptor | 3.38 | −0.1 | ||
| O | 19 | CD1 | LEU | 165 | (A) | H-acceptor | 3.46 | −0.1 | ||
| O | 36 | NE2 | GLN | 63 | (A) | H-acceptor | 3.02 | −1.3 | ||
| O | 41 | CH2 | TRP | 58 | (A) | H-acceptor | 3.68 | −0.1 | ||
| O | 16 | NH2 | ARG | 195 | (A) | ionic | 2.96 | −4.7 | ||
| −6 | ring | CG2 | ILE | 235 | (A) | pi-H | 4.07 | −0.1 | ||
| −6 | ring | CD2 | HIS | 305 | (A) | pi-H | 3.44 | −0.1 | ||
| −6 | ring | N | ALA | 307 | (A) | pi-H | 4.28 | −0.4 | ||
| −6 | ring | CB | ALA | 307 | (A) | pi-H | 4.29 | −0.3 | ||
| 9 | O | 33 | OD1 | ASP | 197 | (A) | H-donor | 3.05 | −2.2 | −9.00002575 |
| O | 33 | OD2 | ASP | 197 | (A) | H-donor | 3.11 | −1.4 | ||
| O | 40 | OD1 | ASP | 197 | (A) | H-donor | 2.83 | −2.6 | ||
| O | 19 | CB | TRP | 59 | (A) | H-acceptor | 3.24 | −0.1 | ||
| O | 33 | NE2 | HIS | 101 | (A) | H-acceptor | 3.23 | −0.7 | ||
| O | 40 | NH2 | ARG | 195 | (A) | H-acceptor | 3.07 | −0.2 | ||
| O | 40 | CB | ALA | 198 | (A) | H-acceptor | 3.5 | −0.1 | ||
| C | 9 | 5-ring | TRP | 59 | (A) | H-pi | 4.35 | −0.1 | ||
| 10 | O | 22 | OE1 | GLU | 240 | (A) | H-donor | 3.38 | −0.4 | − 10.8587704 |
| O | 22 | OE2 | GLU | 240 | (A) | H-donor | 3.17 | −0.2 | ||
| O | 40 | OD1 | ASP | 197 | (A) | H-donor | 3.13 | −2.5 | ||
| O | 22 | CG | LEU | 237 | (A) | H-acceptor | 3.48 | −0.1 | ||
| O | 22 | CD1 | LEU | 237 | (A) | H-acceptor | 3.47 | −0.1 | ||
| O | 39 | CG2 | ILE | 235 | (A) | H-acceptor | 3.78 | −0.1 | ||
| O | 39 | N | ALA | 307 | (A) | H-acceptor | 2.97 | −4.6 | ||
| −6 | ring | CB | ALA | 198 | (A) | pi-H | 4.15 | −0.5 | ||
| 11 | O | 62 | OD2 | ASP | 197 | (A) | H-donor | 3.12 | −1.3 | −10.0222139 |
| O | 19 | CG2 | ILE | 235 | (A) | H-acceptor | 3.47 | −0.1 | ||
| C | 55 | 5-ring | HIS | 101 | (A) | H-pi | 4.64 | −0.5 | ||
| C | 60 | 6-ring | TRP | 58 | (A) | H-pi | 4.77 | −0.1 | ||
| O | 62 | 5-ring | HIS | 101 | (A) | H-pi | 4.84 | −0.1 | ||
| −6 | ring | CB | TYR | 62 | (A) | pi-H | 3.74 | −0.3 | ||
| 12 | O | 41 | O | THR | 163 | (A) | H-donor | 2.98 | −1.1 | −7.80944586 |
| 13 | O | 23 | NE2 | GLN | 63 | (A) | H-acceptor | 3 | −2.5 | −9.71675777 |
| O | 45 | NE2 | HIS | 299 | (A) | H-acceptor | 2.97 | −6.2 | ||
| O | 44 | NH2 | ARG | 195 | (A) | ionic | 3.99 | −0.5 | ||
| O | 45 | NH1 | ARG | 195 | (A) | ionic | 3.92 | −0.7 | ||
| O | 45 | NH2 | ARG | 195 | (A) | ionic | 2.95 | −4.8 | ||
| 14 | O | 25 | OE1 | GLU | 233 | (A) | H-donor | 2.89 | −2.8 | −11.215291 |
| O | 68 | OD1 | ASP | 356 | (A) | H-donor | 3.05 | −4 | ||
| O | 53 | NE2 | GLN | 63 | (A) | H-acceptor | 2.98 | −2.3 | ||
| 15 | O | 22 | OD1 | ASP | 197 | (A) | H-donor | 2.93 | −2.3 | −14.5967274 |
| O | 20 | CG | LEU | 162 | (A) | H-acceptor | 3.69 | −0.1 | ||
| O | 21 | NH2 | ARG | 195 | (A) | H-acceptor | 3.11 | −1.5 | ||
| O | 21 | NE2 | HIS | 299 | (A) | H-acceptor | 3.61 | −1 | ||
| O | 21 | NH2 | ARG | 195 | (A) | ionic | 3.11 | −3.8 | ||
| −6 | ring | CB | ALA | 198 | (A) | pi-H | 4.48 | −0.2 | ||
| −6 | ring | CG2 | ILE | 235 | (A) | pi-H | 4.56 | −0.3 | ||
| −6 | ring | CD1 | ILE | 235 | (A) | pi-H | 3.76 | −0.1 | ||
| 16 | C | 7 | OD1 | ASP | 300 | (A) | H-donor | 3.59 | −0.1 | −11.8797693 |
| C | 7 | OD2 | ASP | 300 | (A) | H-donor | 3.53 | −0.1 | ||
| O | 24 | OE1 | GLU | 233 | (A) | H-donor | 3.73 | −0.1 | ||
| O | 23 | NH2 | ARG | 195 | (A) | H-acceptor | 2.94 | −1.7 | ||
| O | 23 | NE2 | HIS | 299 | (A) | H-acceptor | 3.15 | −2.3 | ||
| O | 31 | CB | TYR | 62 | (A) | H-acceptor | 3.45 | −0.1 | ||
| O | 23 | NH1 | ARG | 195 | (A) | ionic | 3.79 | −1 | ||
| O | 23 | NH2 | ARG | 195 | (A) | ionic | 2.94 | −4.9 | ||
| C | 11 | 6-ring | TRP | 58 | (A) | H-pi | 4.83 | −0.4 | ||
| C | 14 | 5-ring | TRP | 59 | (A) | H-pi | 4.38 | −0.2 | ||
| O | 27 | 5-ring | TRP | 59 | (A) | H-pi | 3.66 | −2.4 | ||
| −6 | ring | NE2 | GLN | 63 | (A) | pi-H | 3.67 | −0.1 | ||
| −6 | ring | CD1 | LEU | 165 | (A) | pi-H | 4.89 | −0.3 | ||
| 17 | O | 24 | O | TYR | 62 | (A) | H-donor | 3.05 | −2.1 | −10.7860909 |
| C | 33 | O | HIS | 305 | (A) | H-donor | 3.51 | −0.2 | ||
| C | 39 | O | HIS | 305 | (A) | H-donor | 3.49 | −0.2 | ||
| O | 26 | NE2 | GLN | 63 | (A) | H-acceptor | 2.98 | −5.6 | ||
| O | 26 | CD1 | LEU | 165 | (A) | H-acceptor | 3.97 | −0.1 | ||
| −6 | ring | CB | TYR | 62 | (A) | pi-H | 4.83 | −0.1 | ||
| −6 | ring | CD1 | LEU | 165 | (A) | pi-H | 4 | −0.2 | ||
| −6 | ring | CG2 | ILE | 235 | (A) | pi-H | 4.31 | −0.1 | ||
| 18 | O | 27 | O | TYR | 62 | (A) | H-donor | 3.06 | −1 | −7.62582397 |
| 19 | C | 18 | O | HIS | 305 | (A) | H-donor | 3.65 | −0.2 | −11.0418396 |
| O | 25 | NE2 | HIS | 305 | (A) | H-acceptor | 3.04 | −2.1 | ||
| C | 29 | 5-ring | HIS | 305 | (A) | H-pi | 4.89 | −0.1 | ||
| − 6 | ring | CH2 | TRP | 58 | (A) | pi-H | 4.87 | −0.1 | ||
| −6 | ring | CA | GLY | 306 | (A) | pi-H | 3.75 | −0.1 | ||
| −6 | ring | CB | ALA | 307 | (A) | pi-H | 3.65 | −0.4 | ||
| 20 | O | 53 | OD2 | ASP | 356 | (A) | H-donor | 3.19 | −1.3 | −12.1673326 |
| O | 24 | NE2 | HIS | 305 | (A) | H-acceptor | 3.04 | −1.9 | ||
| O | 43 | CD1 | LEU | 165 | (A) | H-acceptor | 3.94 | −0.1 | ||
| O | 45 | NE2 | GLN | 63 | (A) | H-acceptor | 3.07 | −0.5 | ||
| C | 40 | 5-ring | TRP | 59 | (A) | H-pi | 4.1 | −0.1 | ||
| O | 45 | 5-ring | TRP | 59 | (A) | H-pi | 3.98 | −0.5 | ||
| O | 45 | 6-ring | TRP | 59 | (A) | H-pi | 4.8 | −0.2 | ||
| 21 | C | 1 | OD1 | ASP | 197 | (A) | H-donor | 3.25 | −0.1 | −12.8208132 |
| O | 34 | OD1 | ASP | 197 | (A) | H-donor | 2.92 | −3.6 | ||
| O | 42 | OH | TYR | 151 | (A) | H-acceptor | 2.9 | −1.1 | ||
| O | 42 | CD1 | LEU | 162 | (A) | H-acceptor | 3.77 | −0.1 | ||
| O | 44 | CA | GLY | 306 | (A) | H-acceptor | 3.39 | −0.1 | ||
| O | 44 | N | ALA | 307 | (A) | H-acceptor | 2.96 | −2.2 | ||
| −6 | ring | CB | ALA | 198 | (A) | pi-H | 4.1 | −0.8 | ||
| 22 | C | 28 | OD1 | ASP | 300 | (A) | H-donor | 3.13 | −0.5 | − 10.3951654 |
| O | 36 | O | TYR | 62 | (A) | H-donor | 2.83 | −1.5 | ||
| O | 52 | OD1 | ASP | 300 | (A) | H-donor | 3.36 | −0.1 | ||
| O | 31 | CZ3 | TRP | 58 | (A) | H-acceptor | 3.55 | −0.1 | ||
| 23 | O | 23 | OD1 | ASP | 197 | (A) | H-donor | 2.9 | −0.5 | −13.9205046 |
| C | 60 | OD2 | ASP | 300 | (A) | H-donor | 3.45 | −0.2 | ||
| O | 46 | NE2 | HIS | 305 | (A) | H-acceptor | 3.44 | −0.6 | ||
| O | 50 | NE2 | HIS | 305 | (A) | H-acceptor | 3.2 | −0.5 | ||
| O | 52 | CD2 | LEU | 165 | (A) | H-acceptor | 3.7 | −0.1 | ||
| −6 | ring | CB | ALA | 198 | (A) | pi-H | 4.43 | −0.2 | ||
| −6 | ring | CB | ALA | 307 | (A) | pi-H | 4.85 | −0.1 | ||
| 24 | C | 2 | OD2 | ASP | 197 | (A) | H-donor | 3.47 | −0.5 | −15.0375738 |
| O | 26 | OD1 | ASP | 300 | (A) | H-donor | 2.55 | −3 | ||
| O | 28 | OD1 | ASP | 197 | (A) | H-donor | 2.5 | −3.6 | ||
| O | 30 | O | TYR | 62 | (A) | H-donor | 2.64 | −2.2 | ||
| O | 47 | OD1 | ASP | 356 | (A) | H-donor | 2.64 | −1.8 | ||
| O | 49 | OD1 | ASP | 356 | (A) | H-donor | 3.36 | −0.3 | ||
| O | 73 | O | THR | 163 | (A) | H-donor | 2.72 | −2.2 | ||
| O | 28 | NH2 | ARG | 195 | (A) | H-acceptor | 3.08 | −0.1 | ||
| O | 47 | NE2 | HIS | 305 | (A) | H-acceptor | 3 | −2.9 | ||
| O | 73 | CG | LEU | 165 | (A) | H-acceptor | 3.68 | −0.1 | ||
| O | 73 | CD2 | LEU | 165 | (A) | H-acceptor | 3.5 | −0.1 | ||
| C | 33 | 5-ring | TRP | 59 | (A) | H-pi | 3.59 | −1 | ||
| C | 38 | 5-ring | TRP | 59 | (A) | H-pi | 4.09 | −0.2 | ||
| C | 44 | 6-ring | TRP | 59 | (A) | H-pi | 3.86 | −0.2 | ||
| −6 | ring | CB | TYR | 62 | (A) | pi-H | 3.68 | −0.1 | ||
Nutritional contents of P. hydropiper crude powder
| 1 | 0.552 | 23.8 | 3.3 | 20.5 | 2.859601 | |
| 2 | 0.6028 | 25 | 3.3 | 21.7 | 2.771898 | |
| 3 | 0.6042 | 24.6 | 3.3 | 21.3 | 2.714499 | |
| 1 | 16.3058 | 18.24 | 1.9342 | 17.9325 | 0.3075 | |
| 2 | 16.3003 | 18.4246 | 2.1243 | 18.0682 | 0.3564 | |
| 3 | 14.6234 | 15.841 | 1.2176 | 15.6652 | 0.1758 | |
| 1 | 23.1155 | 24.1033 | 0.9878 | 23.2244 | 0.1089 | |
| 2 | 20.9005 | 22.1234 | 1.2229 | 21.0294 | 0.1289 | |
| 3 | 29.3161 | 31.2188 | 1.9027 | 29.5186 | 0.2025 | |
| 1 | 2.2468 | 29.6871 | 29.7832 | 0.0961 | – | |
| 2 | 2.6881 | 22.654 | 22.7482 | 0.0942 | – | |
| 3 | 1.9867 | 28.3641 | 28.4588 | 0.0947 | – | |
Result of hemagglutination effect of P. hydropiper extracts and saponins on different blood groups at different concentrations
| Blood groups | Ph.Cr | Ph.Hex | Ph.Chf | Ph.EtAc | Ph.Bt | Ph.Aq | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1:1 | 1:2 | 1:4 | 1:1 | 1:2 | 1:4 | 1:1 | 1:2 | 1:4 | 1:1 | 1:2 | 1:4 | 1:1 | 1:2 | 1:4 | 1:1 | 1:2 | 1:4 | |
| A+ | – | – | – | +++ | ++ | + | – | – | – | – | – | – | – | – | – | – | – | – |
| A- | ++ | + | + | +++ | ++ | ++ | – | – | – | + | + | – | – | – | – | + | + | + |
| B+ | – | – | – | +++ | +++ | +++ | – | – | – | – | – | – | – | – | – | + | + | + |
| B- | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
| AB+ | +++ | ++ | ++ | +++ | ++ | ++ | – | – | – | ++ | + | – | +++ | ++ | ++ | – | – | – |
| AB- | +++ | ++ | ++ | +++ | ++ | ++ | ++ | ++ | + | ++ | + | + | +++ | ++ | ++ | – | – | – |
| O+ | +++ | ++ | ++ | +++ | ++ | ++ | – | – | – | – | – | – | +++ | ++ | ++ | – | + | + |
| O- | +++ | ++ | + | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
+++: High hemagglutination activity, ++: Intermediate activity, +: Low activity and - = No activity