Literature DB >> 35059033

The protein disorder cycle.

Vladimir N Uversky1.   

Abstract

This mini-review represents a brief, disorder-centric consideration of the interplay between order and disorder in proteins. The goal here is to show that inside the cell, folding, non-folding, and misfolding of proteins are interlinked on multiple levels. This is evidenced by the highly heterogeneous spatio-temporal structural organization of a protein molecule, where one can find differently (dis)ordered components that can undergo local or global order-to-disorder and disorder-to-order transitions needed for functionality. This is further illustrated by the fact that at particular moments of their life, most notably during their synthesis and degradation, all proteins are at least partially disordered. In addition to these intrinsic forms of disorder, proteins are constantly facing extrinsic disorder, which is intrinsic disorder in their functional partners. All this comprises the multileveled protein disorder cycle. © International Union for Pure and Applied Biophysics (IUPAB) and Springer-Verlag GmbH Germany, part of Springer Nature 2021.

Entities:  

Keywords:  Intrinsically disordered protein region; Nascent polypeptide chain; Protein biosynthesis; Protein degradation; Protein folding; Protein function; Protein misfolding

Year:  2021        PMID: 35059033      PMCID: PMC8724471          DOI: 10.1007/s12551-021-00853-2

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  109 in total

1.  Analysis of ordered and disordered protein complexes reveals structural features discriminating between stable and unstable monomers.

Authors:  Kannan Gunasekaran; Chung-Jung Tsai; Ruth Nussinov
Journal:  J Mol Biol       Date:  2004-08-27       Impact factor: 5.469

Review 2.  Understanding protein non-folding.

Authors:  Vladimir N Uversky; A Keith Dunker
Journal:  Biochim Biophys Acta       Date:  2010-02-01

Review 3.  Fuzzy complexes: Specific binding without complete folding.

Authors:  Rashmi Sharma; Zsolt Raduly; Marton Miskei; Monika Fuxreiter
Journal:  FEBS Lett       Date:  2015-07-27       Impact factor: 4.124

Review 4.  Multi-functionality of proteins involved in GPCR and G protein signaling: making sense of structure-function continuum with intrinsic disorder-based proteoforms.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2019-08-19       Impact factor: 9.261

Review 5.  Conditionally and transiently disordered proteins: awakening cryptic disorder to regulate protein function.

Authors:  Ursula Jakob; Richard Kriwacki; Vladimir N Uversky
Journal:  Chem Rev       Date:  2014-02-06       Impact factor: 60.622

6.  Disordered domains and high surface charge confer hubs with the ability to interact with multiple proteins in interaction networks.

Authors:  Ashwini Patil; Haruki Nakamura
Journal:  FEBS Lett       Date:  2006-03-10       Impact factor: 4.124

7.  Structural disorder in eukaryotes.

Authors:  Rita Pancsa; Peter Tompa
Journal:  PLoS One       Date:  2012-04-05       Impact factor: 3.240

8.  Flexible nets: disorder and induced fit in the associations of p53 and 14-3-3 with their partners.

Authors:  Christopher J Oldfield; Jingwei Meng; Jack Y Yang; Mary Qu Yang; Vladimir N Uversky; A Keith Dunker
Journal:  BMC Genomics       Date:  2008       Impact factor: 3.969

9.  Experimentally Determined Long Intrinsically Disordered Protein Regions Are Now Abundant in the Protein Data Bank.

Authors:  Alexander Miguel Monzon; Marco Necci; Federica Quaglia; Ian Walsh; Giuseppe Zanotti; Damiano Piovesan; Silvio C E Tosatto
Journal:  Int J Mol Sci       Date:  2020-06-24       Impact factor: 5.923

Review 10.  What's in a name? Why these proteins are intrinsically disordered: Why these proteins are intrinsically disordered.

Authors:  A Keith Dunker; M Madan Babu; Elisar Barbar; Martin Blackledge; Sarah E Bondos; Zsuzsanna Dosztányi; H Jane Dyson; Julie Forman-Kay; Monika Fuxreiter; Jörg Gsponer; Kyou-Hoon Han; David T Jones; Sonia Longhi; Steven J Metallo; Ken Nishikawa; Ruth Nussinov; Zoran Obradovic; Rohit V Pappu; Burkhard Rost; Philipp Selenko; Vinod Subramaniam; Joel L Sussman; Peter Tompa; Vladimir N Uversky
Journal:  Intrinsically Disord Proteins       Date:  2013-04-01
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  1 in total

1.  Low Complexity Induces Structure in Protein Regions Predicted as Intrinsically Disordered.

Authors:  Mariane Gonçalves-Kulik; Pablo Mier; Kristina Kastano; Juan Cortés; Pau Bernadó; Friederike Schmid; Miguel A Andrade-Navarro
Journal:  Biomolecules       Date:  2022-08-10
  1 in total

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