Literature DB >> 26226339

Fuzzy complexes: Specific binding without complete folding.

Rashmi Sharma1, Zsolt Raduly1, Marton Miskei1, Monika Fuxreiter2.   

Abstract

Specific molecular recognition is assumed to require a well-defined set of contacts and devoid of conformational and interaction ambiguities. Growing experimental evidence demonstrates however, that structural multiplicity or dynamic disorder can be retained in protein complexes, termed as fuzziness. Fuzzy regions establish alternative contacts between specific partners usually via transient interactions. Nature often tailors the dynamic properties of these segments via post-translational modifications or alternative splicing to fine-tune affinity. Most experimentally characterized fuzzy complexes are involved in regulation of gene-expression, signal transduction and cell-cycle regulation. Fuzziness is also characteristic to viral protein complexes, cytoskeleton structure, and surprisingly in a few metabolic enzymes. A plausible role of fuzzy complexes in increasing half-life of intrinsically disordered proteins is also discussed.
Copyright © 2015 The Authors. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Conformational selection; Fuzzy complex; Intrinsically disordered protein; Protein interaction; Signal transduction; Specificity; Transcription regulation; Viral protein

Mesh:

Substances:

Year:  2015        PMID: 26226339     DOI: 10.1016/j.febslet.2015.07.022

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  71 in total

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3.  Concomitant disorder and high-affinity zinc binding in the human zinc- and iron-regulated transport protein 4 intracellular loop.

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4.  Structural Characterization of N-WASP Domain V Using MD Simulations with NMR and SAXS Data.

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5.  Disentangling polydispersity in the PCNA-p15PAF complex, a disordered, transient and multivalent macromolecular assembly.

Authors:  Tiago N Cordeiro; Po-Chia Chen; Alfredo De Biasio; Nathalie Sibille; Francisco J Blanco; Jochen S Hub; Ramon Crehuet; Pau Bernadó
Journal:  Nucleic Acids Res       Date:  2017-02-17       Impact factor: 16.971

6.  The herpes viral transcription factor ICP4 forms a novel DNA recognition complex.

Authors:  Richard B Tunnicliffe; Michael P Lockhart-Cairns; Colin Levy; A Paul Mould; Thomas A Jowitt; Hilary Sito; Clair Baldock; Rozanne M Sandri-Goldin; Alexander P Golovanov
Journal:  Nucleic Acids Res       Date:  2017-07-27       Impact factor: 16.971

Review 7.  Principles for Integrative Structural Biology Studies.

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Journal:  Cell       Date:  2019-05-30       Impact factor: 41.582

8.  Deciphering the "Fuzzy" Interaction of FG Nucleoporins and Transport Factors Using Small-Angle Neutron Scattering.

Authors:  Samuel Sparks; Deniz B Temel; Michael P Rout; David Cowburn
Journal:  Structure       Date:  2018-02-08       Impact factor: 5.006

Review 9.  The nuclear pore complex core scaffold and permeability barrier: variations of a common theme.

Authors:  Ryo Hayama; Michael P Rout; Javier Fernandez-Martinez
Journal:  Curr Opin Cell Biol       Date:  2017-06-15       Impact factor: 8.382

10.  Thermodynamic characterization of the multivalent interactions underlying rapid and selective translocation through the nuclear pore complex.

Authors:  Ryo Hayama; Samuel Sparks; Lee M Hecht; Kaushik Dutta; Jerome M Karp; Christina M Cabana; Michael P Rout; David Cowburn
Journal:  J Biol Chem       Date:  2018-01-26       Impact factor: 5.157

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