| Literature DB >> 35043109 |
Jeremy Manry1, Paul Bastard2, Adrian Gervais1, Tom Le Voyer1, Jérémie Rosain3, Quentin Philippot1, Eleftherios Michailidis4, Hans-Heinrich Hoffmann5, Shohei Eto6, Marina Garcia-Prat7, Lucy Bizien1, Alba Parra-Martínez7, Rui Yang8, Liis Haljasmägi9, Mélanie Migaud1, Karita Särekannu10, Julia Maslovskaja10, Nicolas de Prost11, Yacine Tandjaoui-Lambiotte12, Charles-Edouard Luyt13, Blanca Amador-Borrero14, Alexandre Gaudet15, Julien Poissy15, Pascal Morel16, Pascale Richard16, Fabrice Cognasse17, Jesus Troya18, Sophie Trouillet-Assant19, Alexandre Belot19, Kahina Saker19, Pierre Garçon20, Jacques G Rivière21, Jean-Christophe Lagier22, Stéphanie Gentile23, Lindsey Rosen24, Elana Shaw25, Tomohiro Morio26, Junko Tanaka27, David Dalmau28, Pierre-Louis Tharaux29, Damien Sene14, Alain Stepanian30, Bruno Mégarbane31, Vasiliki Triantafyllia32, Arnaud Fekkar1, James Heath33, Jose Franco34, Juan-Manuel Anaya35, Jordi Solé-Violán36, Luisa Imberti37, Andrea Biondi38, Paolo Bonfanti39, Riccardo Castagnoli25, Ottavia Delmonte40, Yu Zhang41, Andrew Snow42, Steve Holland43, Catherine Biggs44, Marcela Moncada-Vélez8, Andrés Arias8, Lazaro Lorenzo45, Soraya Boucherit45, Dany Anglicheau46, Anna Planas47, Filomeen Haerynck48, Sotirija Duvlis49, Robert Nussbaum50, Tayfun Ozcelik51, Sevgi Keles52, Aziz Bousfiha53, Jalila El Bakkouri54, Carolina Ramirez-Santana55, Stéphane Paul56, Qiang Pan-Hammarstrom57, Lennart Hammarstrom57, Annabelle Dupont58, Alina Kurolap59, Christine Metz60, Alessandro Aiuti61, Giorgio Casari62, Vito Lampasona63, Fabio Ciceri64, Lucila Barreiros65, Elena Dominguez-Garrido66, Mateus Vidigal67, Mayana Zatz67, Diederik van de Beek68, Sabina Sahanic69, Ivan Tancevski70, Yurii Stepanovskyy71, Oksana Boyarchuk72, Yoko Nukui73, Miyuki Tsumura74, Loreto Vidaur75, Stuart Tangye76, Sonia Burrel77, Darragh Duffy78, Lluis Quintana-Murci79, Adam Klocperk80, Nelli Kann81, Anna Shcherbina81, Yu-Lung Lau82, Daniel Leung83, Matthieu Coulongeat84, Julien Marlet85, Rutger Koning68, Luis Reyes86, Angélique Chauvineau-Grenier87, Fabienne Venet19, Guillaume Monneret88, Michel Nussenzweig89, Romain Arrestier90, Idris Boudhabhay91, Hagit Baris-Feldman59, David Hagin92, Joost Wauters93, Isabelle Meyts94, Adam Dyer95, Sean Kennelly95, Nollaig Bourke96, Rabih Halwani97, Fatemeh Sharif-Askari98, Karim Dorgham99, Jérôme Sallette100, Souad Mehlal-Sedkaoui100, Suzan AlKhater101, Raúl Rigo-Bonnin102, Francisco Morandeira103, Lucie Roussel104, Donald Vinh105, Christian Erikstrup106, Antonio Condino-Neto107, Carolina Prando108, Anastasiia Bondarenko71, András Spaan109, Laurent Gilardin110, Jacques Fellay111, Stanislas Lyonnet112, Kaya Bilguvar113, Richard Lifton114, Shrikant Mane113, Mark Anderson115, Bertrand Boisson89, Vivien Béziat1, Shen-Ying Zhang1, Evangelos Andreakos116, Olivier Hermine117, Aurora Pujol118, Pärt Peterson119, Trine Hyrup Mogensen120, Lee Rowen121, James Mond122, Stéphanie Debette123, Xavier deLamballerie124, Charles Burdet125, Lila Bouadma126, Marie Zins127, Pere Soler-Palacin128, Roger Colobran129, Guy Gorochov130, Xavier Solanich131, Sophie Susen58, Javier Martinez-Picado132, Didier Raoult133, Marc Vasse134, Peter Gregersen135, Carlos Rodríguez-Gallego136, Lorenzo Piemonti137, Luigi Notarangelo138, Helen Su139, Kai Kisand9, Satoshi Okada140, Anne Puel141, Emmanuelle Jouanguy89, Charles Rice89, Pierre Tiberghien142, Qian Zhang109, Jean-Laurent Casanova45, Laurent Abel45, Aurélie Cobat141.
Abstract
SARS-CoV-2 infection fatality rate (IFR) doubles with every five years of age from childhood onward. Circulating autoantibodies neutralizing IFN-α, IFN-ω, and/or IFN-β are found in ~20% of deceased patients across age groups. In the general population, they are found in ~1% of individuals aged 20-70 years and in >4% of those >70 years old. With a sample of 1,261 deceased patients and 34,159 uninfected individuals, we estimated both IFR and relative risk of death (RRD) across age groups for individuals carrying autoantibodies neutralizing type I IFNs, relative to non-carriers. For autoantibodies neutralizing IFN-α2 or IFN-ω, the RRD was 17.0[95% CI:11.7-24.7] for individuals under 70 years old and 5.8[4.5-7.4] for individuals aged 70 and over, whereas, for autoantibodies neutralizing both molecules, the RRD was 188.3[44.8-774.4] and 7.2[5.0-10.3], respectively. IFRs increased with age, from 0.17%[0.12-0.31] for individuals <40 years old to 26.7%[20.3-35.2] for those ≥80 years old for autoantibodies neutralizing IFN-α2 or IFN-ω, and from 0.84%[0.31-8.28] to 40.5%[27.82-61.20] for the same two age groups, for autoantibodies neutralizing both molecules. Autoantibodies against type I IFNs increase IFRs, and are associated with high RRDs, particularly those neutralizing both IFN-α2 and -ω. Remarkably, IFR increases with age, whereas RRD decreases with age. Autoimmunity to type I IFNs appears to be second only to age among common predictors of COVID-19 death.Entities:
Year: 2022 PMID: 35043109 PMCID: PMC8764723 DOI: 10.21203/rs.3.rs-1225906/v1
Source DB: PubMed Journal: Res Sq
Lines of evidence suggesting that auto-Abs against type I IFNs are strong determinants of the risk of life-threatening COVID-19.
| Evidence | Examples | References |
|---|---|---|
| Auto-Abs against type I IFNs are present before SARS-CoV-2 infection | In patients for whom a sample collected before the COVID-19 pandemic was available, the auto-Abs were found to pre-exist infection |
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| These auto-Abs are found in the uninfected general population, and their prevalence increases after the age of 65 years |
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| Auto-Abs are associated with COVID-19 severity | Patients with inborn errors underlying these auto-Abs from infancy onward (e.g. APS-1) have a very high risk of developing critical COVID-19 pneumonia |
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| The population of patients with critical disease includes a higher proportion of individuals producing these auto-Abs than the population of patients with silent or mild infection (ORs depending on the nature, number, and concentrations of type I IFN neutralized) |
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| The results concerning the proportions of critical cases with auto-Abs against type I IFNs have already been replicated in >15 different cities (Americas, Europe, Asia) |
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| Auto-Abs against type I IFNs neutralize host antiviral activity | These auto-Abs neutralize the antiviral activity of type I IFNs against SARS-CoV-2 |
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| These auto-Abs are found |
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| These auto-Abs are found |
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| A key virulence factor of SARS-CoV-2 |
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| Animals with type I IFN deficiency develop critical disease, including animals treated with mAbs that neutralize type I IFNs |
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| Auto-Abs against cytokines are clinical phenocopies of the corresponding inborn errors | Patients with auto-Abs against type I IFNs are phenocopies of IFNAR1−/−, IFNAR2−/−, and IRF7−/− patients with critical COVID-19 pneumonia |
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| Patients with auto-Abs against IL-6, IL-17, GM-CSF, and type II IFN are phenocopies of the corresponding inborn errors and underlie staphylococcal disease, ucocutaneous candidiasis, nocardiosis, and mycobacterial diseases, respectively |
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Characteristics of the general population cohort and of the cohort of patients who died from COVID-19, by age, sex and autoantibody status
| Neutralization 100 pg/mL | Neutralization 10 ng/mL | |||
|---|---|---|---|---|
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| Characteristics | General Population ( | Deceased Patients ( | General Population ( | Deceased Patients ( |
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| 5,429 (50.4)[ | 821 (73.2) | 17,859 (52.3) | 805 (73.5) |
| 62.3 ±17.2 | 70.7 ±13.0 | 52.7 ±18.2 | 70.6 ±13.1 | |
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| 20–39 yr | 1,251 (11.6) | 17 (1.5) | 9,102 (26.6) | 15 (1.4) |
| 40–49 yr | 1,459 (13.5) | 43 (3.8) | 5,403 (15.8) | 47 (4.3) |
| 50–59 yr | 1,736 (16.1) | 144 (12.8) | 6,414 (18.9) | 152 (13.9) |
| 60–69 yr | 2,475 (23.0) | 307 (27.4) | 6,881 (20.1) | 289 (26.4) |
| 70–79 yr | 1,790 (16.6) | 307 (27.4) | 3,721 (10.9) | 296 (27.1) |
| ≥80 yr | 2,067 (19.2) | 303 (27.0) | 2,638 (7.7) | 295 (27.0) |
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| IFN-α2 and IFN-ω | 65 (0.6) | 102 (9.1) | 45 (0.1) | 75 (6.8) |
| IFN-α2 or IFN-ω | 246 (2.3) | 203 (18.1) | 181 (0.5) | 130 (11.9) |
| IFN-α2 | 151 (1.4) | 140 (12.5) | 117 (0.3) | 118 (10.8) |
| IFN-ω | 160 (1.5) | 165 (14.7) | 109 (0.3) | 87 (8.0) |
| IFN-β[ | NA | NA | 24 (0.3) | 6 (0.9) |
SD standard deviation.
NA not available.
Age is given in years and corresponds to age at the time of recruitment for members of the general population cohort (controls) and age at death for COVID-19 patients.
IFN-β neutralization experiments were performed only for a concentration of 10 ng/mL, on 9,126 individuals (49.5% male, mean age 60.6 years) from the general population and 636 COVID-19 patients (71.1% male, mean age 72.9 years).
Figure 1Relative risks of death associated with auto-Abs neutralizing low concentrations of IFN-α2 or -ω, by age and sex.
RRDs for individuals with auto-Abs neutralizing low concentrations of IFN-α2 or IFN-ω relative to individuals without such auto-Abs, by age and sex. RRDs are displayed on a logarithmic scale (A) for six age classes, and (B) for male and female subjects under and over the age of 70 years. Vertical bars represent the 95% CI.
Figure 2Relative risks of death associated with auto-Abs neutralizing various combinations of type I IFNs, by age.
RRDs for individuals with auto-Abs neutralizing different combinations of type I IFNs relative to individuals without such auto-Abs, by age. RRDs are displayed on a logarithmic scale for individuals under and over 70 years of age with (A) auto-Abs neutralizing low concentrations of IFN-α2 and IFN-ω, IFN-α2 or IFN-ω, IFN-α2, IFN-ω, and (B) auto-Abs neutralizing high concentrations of IFN-α2 and IFN-ω, IFN-α2 or IFN-ω, IFN-α2, IFN-ω and IFN-β, relative to individuals without such combinations of auto-Abs. Vertical bars represent the 95% CI.
Figure 3SARS-CoV-2 infection fatality rates by age.
IFRs are provided in the general population for both sexes (gray) and for males only (blue) using the data of O’Driscoll et al. 4; IFRAAB (green) are shown for individuals carriers of auto-Abs neutralizing low concentrations of IFN-α2 or IFN-ω. Auto-Abs against type I IFNs are associated with high RRDs and strongly increase IFR, to a much greater extent than maleness, and by inference than other classical common risk factors providing ORs of death similar to maleness (around 2) such as some comorbidities, or the most significant common genetic variant on chromosome 33.
Figure 4SARS-CoV-2 infection fatality rates for carriers of various combinations of neutralizing auto-Abs, by age.
IFRaab values (%) are displayed, on a logarithmic scale, by age, for individuals with (A) auto-Abs neutralizing low concentrations of IFN-α2 and IFN-ω, IFN-α2 or IFN-ω, IFN-α2, IFN-ω, and (B) auto-Abs neutralizing high concentrations of IFN-α2 and IFN-ω, IFN-α2 or IFN-ω, IFN-α2, IFN-ω and lFN-β. Vertical bars represent the 95% CI. Horizontal black lines represent the IFR provided by O’Driscoll et al4.