Literature DB >> 35042977

Modulation of cellular processes by histone and non-histone protein acetylation.

Maria Shvedunova1, Asifa Akhtar2.   

Abstract

Lysine acetylation is a widespread and versatile protein post-translational modification. Lysine acetyltransferases and lysine deacetylases catalyse the addition or removal, respectively, of acetyl groups at both histone and non-histone targets. In this Review, we discuss several features of acetylation and deacetylation, including their diversity of targets, rapid turnover, exquisite sensitivity to the concentrations of the cofactors acetyl-CoA, acyl-CoA and NAD+, and tight interplay with metabolism. Histone acetylation and non-histone protein acetylation influence a myriad of cellular and physiological processes, including transcription, phase separation, autophagy, mitosis, differentiation and neural function. The activity of lysine acetyltransferases and lysine deacetylases can, in turn, be regulated by metabolic states, diet and specific small molecules. Histone acetylation has also recently been shown to mediate cellular memory. These features enable acetylation to integrate the cellular state with transcriptional output and cell-fate decisions.
© 2022. Springer Nature Limited.

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Year:  2022        PMID: 35042977     DOI: 10.1038/s41580-021-00441-y

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   113.915


  357 in total

1.  Substrate and functional diversity of lysine acetylation revealed by a proteomics survey.

Authors:  Sung Chan Kim; Robert Sprung; Yue Chen; Yingda Xu; Haydn Ball; Jimin Pei; Tzuling Cheng; Yoonjung Kho; Hao Xiao; Lin Xiao; Nick V Grishin; Michael White; Xiang-Jiao Yang; Yingming Zhao
Journal:  Mol Cell       Date:  2006-08       Impact factor: 17.970

2.  Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma.

Authors:  Michael A Gillette; Shankha Satpathy; Song Cao; Saravana M Dhanasekaran; Suhas V Vasaikar; Karsten Krug; Francesca Petralia; Yize Li; Wen-Wei Liang; Boris Reva; Azra Krek; Jiayi Ji; Xiaoyu Song; Wenke Liu; Runyu Hong; Lijun Yao; Lili Blumenberg; Sara R Savage; Michael C Wendl; Bo Wen; Kai Li; Lauren C Tang; Melanie A MacMullan; Shayan C Avanessian; M Harry Kane; Chelsea J Newton; MacIntosh Cornwell; Ramani B Kothadia; Weiping Ma; Seungyeul Yoo; Rahul Mannan; Pankaj Vats; Chandan Kumar-Sinha; Emily A Kawaler; Tatiana Omelchenko; Antonio Colaprico; Yifat Geffen; Yosef E Maruvka; Felipe da Veiga Leprevost; Maciej Wiznerowicz; Zeynep H Gümüş; Rajwanth R Veluswamy; Galen Hostetter; David I Heiman; Matthew A Wyczalkowski; Tara Hiltke; Mehdi Mesri; Christopher R Kinsinger; Emily S Boja; Gilbert S Omenn; Arul M Chinnaiyan; Henry Rodriguez; Qing Kay Li; Scott D Jewell; Mathangi Thiagarajan; Gad Getz; Bing Zhang; David Fenyö; Kelly V Ruggles; Marcin P Cieslik; Ana I Robles; Karl R Clauser; Ramaswamy Govindan; Pei Wang; Alexey I Nesvizhskii; Li Ding; D R Mani; Steven A Carr
Journal:  Cell       Date:  2020-07-09       Impact factor: 41.582

3.  Time-Resolved Analysis Reveals Rapid Dynamics and Broad Scope of the CBP/p300 Acetylome.

Authors:  Brian T Weinert; Takeo Narita; Shankha Satpathy; Balaji Srinivasan; Bogi K Hansen; Christian Schölz; William B Hamilton; Beth E Zucconi; Wesley W Wang; Wenshe R Liu; Joshua M Brickman; Edward A Kesicki; Albert Lai; Kenneth D Bromberg; Philip A Cole; Chunaram Choudhary
Journal:  Cell       Date:  2018-05-24       Impact factor: 41.582

4.  Proteome-wide mapping of the Drosophila acetylome demonstrates a high degree of conservation of lysine acetylation.

Authors:  Brian T Weinert; Sebastian A Wagner; Heiko Horn; Peter Henriksen; Wenshe R Liu; Jesper V Olsen; Lars J Jensen; Chunaram Choudhary
Journal:  Sci Signal       Date:  2011-07-26       Impact factor: 8.192

5.  Subunit composition and substrate specificity of a MOF-containing histone acetyltransferase distinct from the male-specific lethal (MSL) complex.

Authors:  Yong Cai; Jingji Jin; Selene K Swanson; Michael D Cole; Seung Hyuk Choi; Laurence Florens; Michael P Washburn; Joan W Conaway; Ronald C Conaway
Journal:  J Biol Chem       Date:  2009-12-14       Impact factor: 5.157

6.  Lysine acetylation targets protein complexes and co-regulates major cellular functions.

Authors:  Chunaram Choudhary; Chanchal Kumar; Florian Gnad; Michael L Nielsen; Michael Rehman; Tobias C Walther; Jesper V Olsen; Matthias Mann
Journal:  Science       Date:  2009-07-16       Impact factor: 47.728

Review 7.  Comprehensive Catalog of Currently Documented Histone Modifications.

Authors:  Yingming Zhao; Benjamin A Garcia
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-09-01       Impact factor: 10.005

8.  Site-Specific Identification of Lysine Acetylation Stoichiometries in Mammalian Cells.

Authors:  Tong Zhou; Ying-Hua Chung; Jianji Chen; Yue Chen
Journal:  J Proteome Res       Date:  2016-02-19       Impact factor: 4.466

Review 9.  The many lives of KATs - detectors, integrators and modulators of the cellular environment.

Authors:  Bilal N Sheikh; Asifa Akhtar
Journal:  Nat Rev Genet       Date:  2019-01       Impact factor: 53.242

10.  Analysis of human acetylation stoichiometry defines mechanistic constraints on protein regulation.

Authors:  Bogi Karbech Hansen; Rajat Gupta; Linda Baldus; David Lyon; Takeo Narita; Michael Lammers; Chunaram Choudhary; Brian T Weinert
Journal:  Nat Commun       Date:  2019-03-05       Impact factor: 14.919

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  20 in total

1.  Histone editing elucidates the functional roles of H3K27 methylation and acetylation in mammals.

Authors:  Aditya Sankar; Faizaan Mohammad; Arun Kumar Sundaramurthy; Hua Wang; Mads Lerdrup; Tulin Tatar; Kristian Helin
Journal:  Nat Genet       Date:  2022-06-06       Impact factor: 41.307

Review 2.  ALDH1A1 in Cancers: Bidirectional Function, Drug Resistance, and Regulatory Mechanism.

Authors:  Hanxun Yue; Zenan Hu; Rui Hu; Zeying Guo; Ya Zheng; Yuping Wang; Yongning Zhou
Journal:  Front Oncol       Date:  2022-06-22       Impact factor: 5.738

Review 3.  Crosstalk Between Histone and m6A Modifications and Emerging Roles of m6A RNA Methylation.

Authors:  Zibin Xu; Tingfei Xie; Xiaolu Sui; Yunpeng Xu; Lecai Ji; Yanzi Zhang; Aisha Zhang; Jihong Chen
Journal:  Front Genet       Date:  2022-06-15       Impact factor: 4.772

Review 4.  Pathological implication of protein post-translational modifications in cancer.

Authors:  Sheng Pan; Ru Chen
Journal:  Mol Aspects Med       Date:  2022-04-07

Review 5.  A glance at post-translational modifications of human thyroglobulin: potential impact on function and pathogenesis.

Authors:  Laura Tosatto; Francesca Coscia
Journal:  Eur Thyroid J       Date:  2022-06-21

Review 6.  Targeting Epigenetic Regulatory Enzymes for Cancer Therapeutics: Novel Small-Molecule Epidrug Development.

Authors:  Ye Jin; Tianjia Liu; Haoming Luo; Yangyang Liu; Da Liu
Journal:  Front Oncol       Date:  2022-03-28       Impact factor: 6.244

Review 7.  Oncometabolites drive tumorigenesis by enhancing protein acylation: from chromosomal remodelling to nonhistone modification.

Authors:  Yidian Fu; Jie Yu; Fang Li; Shengfang Ge
Journal:  J Exp Clin Cancer Res       Date:  2022-04-15

Review 8.  Metabolic-epigenetic nexus in regulation of stem cell fate.

Authors:  Yi Liu; Di-Xin Cui; Yue Pan; Si-Han Yu; Li-Wei Zheng; Mian Wan
Journal:  World J Stem Cells       Date:  2022-07-26       Impact factor: 5.247

Review 9.  Roles of Epigenetics in Cardiac Fibroblast Activation and Fibrosis.

Authors:  Jingrong Shao; Jiao Liu; Shengkai Zuo
Journal:  Cells       Date:  2022-07-30       Impact factor: 7.666

10.  High-Throughput Identification of Epigenetic Compounds to Enhance Chicken Host Defense Peptide Gene Expression.

Authors:  Zhuo Deng; Wentao Lyu; Guolong Zhang
Journal:  Antibiotics (Basel)       Date:  2022-07-12
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