Literature DB >> 30390049

The many lives of KATs - detectors, integrators and modulators of the cellular environment.

Bilal N Sheikh1, Asifa Akhtar2.   

Abstract

Research over the past three decades has firmly established lysine acetyltransferases (KATs) as central players in regulating transcription. Recent advances in genomic sequencing, metabolomics, animal models and mass spectrometry technologies have uncovered unexpected new roles for KATs at the nexus between the environment and transcriptional regulation. Thousands of reversible acetylation sites have been mapped in the proteome that respond dynamically to the cellular milieu and maintain major processes such as metabolism, autophagy and stress response. Concurrently, researchers are continuously uncovering how deregulation of KAT activity drives disease, including cancer and developmental syndromes characterized by severe intellectual disability. These novel findings are reshaping our view of KATs away from mere modulators of chromatin to detectors of the cellular environment and integrators of diverse signalling pathways with the ability to modify cellular phenotype.

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Year:  2019        PMID: 30390049     DOI: 10.1038/s41576-018-0072-4

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  283 in total

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Journal:  Cell       Date:  1996-03-22       Impact factor: 41.582

2.  ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuation.

Authors:  Yannick Doyon; Christelle Cayrou; Mukta Ullah; Anne-Julie Landry; Valérie Côté; William Selleck; William S Lane; Song Tan; Xiang-Jiao Yang; Jacques Côté
Journal:  Mol Cell       Date:  2006-01-06       Impact factor: 17.970

3.  A human protein complex homologous to the Drosophila MSL complex is responsible for the majority of histone H4 acetylation at lysine 16.

Authors:  Edwin R Smith; Christelle Cayrou; Rong Huang; William S Lane; Jacques Côté; John C Lucchesi
Journal:  Mol Cell Biol       Date:  2005-11       Impact factor: 4.272

4.  Transcription-linked acetylation by Gcn5p of histones H3 and H4 at specific lysines.

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Journal:  Nature       Date:  1996-09-19       Impact factor: 49.962

5.  ChIP-seq accurately predicts tissue-specific activity of enhancers.

Authors:  Axel Visel; Matthew J Blow; Zirong Li; Tao Zhang; Jennifer A Akiyama; Amy Holt; Ingrid Plajzer-Frick; Malak Shoukry; Crystal Wright; Feng Chen; Veena Afzal; Bing Ren; Edward M Rubin; Len A Pennacchio
Journal:  Nature       Date:  2009-02-12       Impact factor: 49.962

6.  Identification of a gene encoding a yeast histone H4 acetyltransferase.

Authors:  S Kleff; E D Andrulis; C W Anderson; R Sternglanz
Journal:  J Biol Chem       Date:  1995-10-20       Impact factor: 5.157

7.  Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes.

Authors:  Zhibin Wang; Chongzhi Zang; Kairong Cui; Dustin E Schones; Artem Barski; Weiqun Peng; Keji Zhao
Journal:  Cell       Date:  2009-08-20       Impact factor: 41.582

8.  Nuclear pore components are involved in the transcriptional regulation of dosage compensation in Drosophila.

Authors:  Sascha Mendjan; Mikko Taipale; Jop Kind; Herbert Holz; Philipp Gebhardt; Malgorzata Schelder; Michiel Vermeulen; Alessia Buscaino; Kent Duncan; Juerg Mueller; Matthias Wilm; Henk G Stunnenberg; Harald Saumweber; Asifa Akhtar
Journal:  Mol Cell       Date:  2006-03-17       Impact factor: 17.970

9.  MOF-associated complexes ensure stem cell identity and Xist repression.

Authors:  Tomasz Chelmicki; Friederike Dündar; Matthew James Turley; Tasneem Khanam; Tugce Aktas; Fidel Ramírez; Anne-Valerie Gendrel; Patrick Rudolf Wright; Pavankumar Videm; Rolf Backofen; Edith Heard; Thomas Manke; Asifa Akhtar
Journal:  Elife       Date:  2014-05-19       Impact factor: 8.140

10.  Tip60 complex binds to active Pol II promoters and a subset of enhancers and co-regulates the c-Myc network in mouse embryonic stem cells.

Authors:  Sarina Ravens; Changwei Yu; Tao Ye; Matthieu Stierle; Laszlo Tora
Journal:  Epigenetics Chromatin       Date:  2015-11-06       Impact factor: 4.954

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  43 in total

Review 1.  Regulation of Central Nervous System Development by Class I Histone Deacetylases.

Authors:  Santosh R D'Mello
Journal:  Dev Neurosci       Date:  2020-01-24       Impact factor: 2.984

2.  Essential roles of HDAC1 and 2 in lineage development and genome-wide DNA methylation during mouse preimplantation development.

Authors:  Panpan Zhao; Huanan Wang; Han Wang; Yanna Dang; Lei Luo; Shuang Li; Yan Shi; Lefeng Wang; Shaohua Wang; Jesse Mager; Kun Zhang
Journal:  Epigenetics       Date:  2019-09-24       Impact factor: 4.528

3.  Decoding Cinnabarinic Acid-Specific Stanniocalcin 2 Induction by Aryl Hydrocarbon Receptor.

Authors:  Nikhil Y Patil; Hui Tang; Iulia Rus; Kangling Zhang; Aditya D Joshi
Journal:  Mol Pharmacol       Date:  2021-11-11       Impact factor: 4.436

Review 4.  The post-translational modification of Fascin: impact on cell biology and its associations with inhibiting tumor metastasis.

Authors:  Zhi-Da Zhang; Rong-Rong Li; Jia-You Chen; Hong-Xin Huang; Yin-Wei Cheng; Li-Yan Xu; En-Min Li
Journal:  Amino Acids       Date:  2022-08-08       Impact factor: 3.789

Review 5.  The role of protein acetylation in carcinogenesis and targeted drug discovery.

Authors:  Jingru Yang; Cong Song; Xianquan Zhan
Journal:  Front Endocrinol (Lausanne)       Date:  2022-09-12       Impact factor: 6.055

6.  Recurrent chromosomal translocations in sarcomas create a megacomplex that mislocalizes NuA4/TIP60 to Polycomb target loci.

Authors:  Nikita Avvakumov; Marie-Eve Lalonde; Nader Alerasool; Charles Joly-Beauparlant; Karine Jacquet; Amel Mameri; Deepthi Sudarshan; Jean-Philippe Lambert; Justine Rousseau; Catherine Lachance; Eric Paquet; Lara Herrmann; Samarth Thonta Setty; Jeremy Loehr; Marcus Q Bernardini; Marjan Rouzbahman; Anne-Claude Gingras; Benoit Coulombe; Arnaud Droit; Mikko Taipale; Yannick Doyon; Jacques Côté
Journal:  Genes Dev       Date:  2022-06-16       Impact factor: 12.890

Review 7.  50+ years of eukaryotic transcription: an expanding universe of factors and mechanisms.

Authors:  Robert G Roeder
Journal:  Nat Struct Mol Biol       Date:  2019-08-22       Impact factor: 15.369

Review 8.  The language of chromatin modification in human cancers.

Authors:  Shuai Zhao; C David Allis; Gang Greg Wang
Journal:  Nat Rev Cancer       Date:  2021-05-17       Impact factor: 60.716

9.  Histone Deacetylase Inhibitors Ameliorate Morphological Defects and Hypoexcitability of iPSC-Neurons from Rubinstein-Taybi Patients.

Authors:  Valentina Alari; Paolo Scalmani; Paola Francesca Ajmone; Sara Perego; Sabrina Avignone; Ilaria Catusi; Paola Adele Lonati; Maria Orietta Borghi; Palma Finelli; Benedetta Terragni; Massimo Mantegazza; Silvia Russo; Lidia Larizza
Journal:  Int J Mol Sci       Date:  2021-05-28       Impact factor: 5.923

Review 10.  Protein acetylation: a novel modus of obesity regulation.

Authors:  Yuexia Liu; Hong Yang; Xuanchen Liu; Huihui Gu; Yizhou Li; Chao Sun
Journal:  J Mol Med (Berl)       Date:  2021-06-01       Impact factor: 4.599

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