Literature DB >> 35032014

Genetic characterization of Chikungunya virus circulating in individuals from Paraná, Brazil.

Deborah de Castro Moreira1, Francisco Ferreira Duarte Junior2, José Renato Pattaro Júnior2, Fernando Américo Jorge2, Fabiana Dos Santos Rando2, Mateus Vaillant Thomazella3, Mayra Marinho Presibella4, Irina Nastassja Riediger4, Maria Aparecida Fernandez2, Dennis Armando Bertolini2.   

Abstract

Phylogenetic analysis carried out in several Brazilian regions shows the circulation of the Asian and East-Central South African (ECSA) Chikungunya virus (CHIKV) genotypes in the country. Until now, there are no genetic studies about CHIKV strains circulating in the South region. In this study, we sequenced 5 new partial sequences of the CHIKV Envelope 1 gene from strains detected in Paraná state during the years 2016-2017. Maximum likelihood and neighbor-joining trees grouped all sequences in Brazilian branches within ECSA genotype and comparative analysis did not show E1-A226V mutation. However, we identified E1-K211T amino acid substitution in a sample demonstrating the dispersion of mutant strains in the country.
© 2022. The Author(s) under exclusive licence to Sociedade Brasileira de Microbiologia.

Entities:  

Keywords:  Chikungunya; Paraná; Sequence analysis

Mesh：

Year:  2022        PMID： 35032014      PMCID： PMC9151936          DOI： 10.1007/s42770-022-00680-x

Source DB:  PubMed          Journal:  Braz J Microbiol        ISSN： 1517-8382            Impact factor:   2.214


  19 in total

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3.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

Authors:  Sudhir Kumar; Glen Stecher; Michael Li; Christina Knyaz; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2018-06-01       Impact factor: 16.240

4.  Genome-scale phylogenetic analyses of chikungunya virus reveal independent emergences of recent epidemics and various evolutionary rates.

Authors:  Sara M Volk; Rubing Chen; Konstantin A Tsetsarkin; A Paige Adams; Tzintzuni I Garcia; Amadou A Sall; Farooq Nasar; Amy J Schuh; Edward C Holmes; Stephen Higgs; Payal D Maharaj; Aaron C Brault; Scott C Weaver
Journal:  J Virol       Date:  2010-04-21       Impact factor: 5.103

5.  Two novel epistatic mutations (E1:K211E and E2:V264A) in structural proteins of Chikungunya virus enhance fitness in Aedes aegypti.

Authors:  Ankita Agarwal; Ajay Kumar Sharma; D Sukumaran; Manmohan Parida; Paban Kumar Dash
Journal:  Virology       Date:  2016-07-15       Impact factor: 3.616

6.  Outbreak of chikungunya virus in a vulnerable population of Sergipe, Brazil-A molecular and serological survey.

Authors:  Marielton Dos Passos Cunha; Cliomar Alves Dos Santos; Daniel Ferreira de Lima Neto; Alessandra Soares Schanoski; Shahab Zaki Pour; Saulo Duarte Passos; Mércia Simone Feitosa de Souza; Danuza Duarte Costa; Paolo Marinho de Andrade Zanotto
Journal:  J Clin Virol       Date:  2017-11-03       Impact factor: 3.168

7.  Emergence and potential for spread of Chikungunya virus in Brazil.

Authors:  Marcio Roberto Teixeira Nunes; Nuno Rodrigues Faria; Janaina Mota de Vasconcelos; Nick Golding; Moritz U G Kraemer; Layanna Freitas de Oliveira; Raimunda do Socorro da Silva Azevedo; Daisy Elaine Andrade da Silva; Eliana Vieira Pinto da Silva; Sandro Patroca da Silva; Valéria Lima Carvalho; Giovanini Evelim Coelho; Ana Cecília Ribeiro Cruz; Sueli Guerreiro Rodrigues; Joao Lídio da Silva Gonçalves Vianez; Bruno Tardelli Diniz Nunes; Jedson Ferreira Cardoso; Robert B Tesh; Simon I Hay; Oliver G Pybus; Pedro Fernando da Costa Vasconcelos
Journal:  BMC Med       Date:  2015-04-30       Impact factor: 8.775

8.  Emergence of the East-Central-South-African genotype of Chikungunya virus in Brazil and the city of Rio de Janeiro may have occurred years before surveillance detection.

Authors:  Thiago Moreno L Souza; Yasmine Rangel Vieira; Edson Delatorre; Giselle Barbosa-Lima; Raul Leal Faria Luiz; Alexandre Vizzoni; Komal Jain; Milene Mesquita Miranda; Nishit Bhuva; Jan F Gogarten; James Ng; Riddhi Thakkar; Andrea Surrage Calheiros; Ana Paula Teixeira Monteiro; Patrícia T Bozza; Fernando A Bozza; Diogo A Tschoeke; Luciana Leomil; Marcos Cesar Lima de Mendonça; Cintia Damasceno Dos Santos Rodrigues; Maria C Torres; Ana Maria Bispo de Filippis; Rita Maria Ribeiro Nogueira; Fabiano L Thompson; Cristina Lemos; Betina Durovni; José Cerbino-Neto; Carlos M Morel; W Ian Lipkin; Nischay Mishra
Journal:  Sci Rep       Date:  2019-02-26       Impact factor: 4.379

Review 9.  Chikungunya virus: clinical aspects and treatment - A Review.

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10.  Genetic characterization of 2006-2008 isolates of Chikungunya virus from Kerala, South India, by whole genome sequence analysis.

Authors:  E Sreekumar; Aneesh Issac; Sajith Nair; Ramkumar Hariharan; M B Janki; D S Arathy; R Regu; Thomas Mathew; M Anoop; K P Niyas; M R Pillai
Journal:  Virus Genes       Date:  2009-10-23       Impact factor: 2.332
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