| Literature DB >> 35008405 |
Valentina Giannini1,2, Laura Pusceddu2, Arianna Defeudis1,2, Giulia Nicoletti1, Giovanni Cappello2, Simone Mazzetti1,2, Andrea Sartore-Bianchi3,4, Salvatore Siena3,4, Angelo Vanzulli3,5, Francesco Rizzetto5, Elisabetta Fenocchio6, Luca Lazzari7, Alberto Bardelli8,9, Silvia Marsoni7, Daniele Regge1,2.
Abstract
The purpose of this paper is to develop and validate a delta-radiomics score to predict the response of individual colorectal cancer liver metastases (lmCRC) to first-line FOLFOX chemotherapy. Three hundred one lmCRC were manually segmented on both CT performed at baseline and after the first cycle of first-line FOLFOX, and 107 radiomics features were computed by subtracting textural features of CT at baseline from those at timepoint 1 (TP1). LmCRC were classified as nonresponders (R-) if they showed progression of disease (PD), according to RECIST1.1, before 8 months, and as responders (R+), otherwise. After feature selection, we developed a decision tree statistical model trained using all lmCRC coming from one hospital. The final output was a delta-radiomics signature subsequently validated on an external dataset. Sensitivity, specificity, positive (PPV), and negative (NPV) predictive values in correctly classifying individual lesions were assessed on both datasets. Per-lesion sensitivity, specificity, PPV, and NPV were 99%, 94%, 95%, 99%, 85%, 92%, 90%, and 87%, respectively, in the training and validation datasets. The delta-radiomics signature was able to reliably predict R- lmCRC, which were wrongly classified by lesion RECIST as R+ at TP1, (93%, averaging training and validation set, versus 67% of RECIST). The delta-radiomics signature developed in this study can reliably predict the response of individual lmCRC to oxaliplatin-based chemotherapy. Lesions forecasted as poor or nonresponders by the signature could be further investigated, potentially paving the way to lesion-specific therapies.Entities:
Keywords: CRC liver metastases; artificial intelligence; delta-radiomics; machine learning; prediction; response to therapy
Year: 2022 PMID: 35008405 PMCID: PMC8750408 DOI: 10.3390/cancers14010241
Source DB: PubMed Journal: Cancers (Basel) ISSN: 2072-6694 Impact factor: 6.639
Figure 1CONSORT flow diagram.
Decision tree performances on training and validation set.
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| Train | 97 | 99 | 94 | 95 | 99 |
| (89–100) | (94–99) | (85–98) | (89–98) | (91–100) | |
| [166/172] | [94/95] | [72/77] | [94/99] | [72/73] | |
| Validation | 86 | 85 | 92 | 90 | 87 |
| (81–92) | (68–95) | (78–98) | (76–96) | (75–94) | |
| [62/70] | [28/33] | [34/37] | [28/31] | [34/39] | |
| Lesion RECIST | 84 | 100 | 67 | 77 | 100 |
| (79–87) | (97–100) | (57–75) | (72–81) | (79–88) | |
| [202/242] | [128/128] | [76/114] | [128/166] | [76/76] |
Figure 2Waterfall plot of lesions included in the training (A) and validation sets (B). The green marks indicate the responder lesions, while the red marks represent the nonresponder lesions. All errors in the validation set (8) are visible as miscolored bars. The y-axis represents the radiomics score produced by the decision tree. The radiomics optimized cutoff is 0.4. Blue lines show the range (0.125–0.5) in which the cutoff could be modified without changing the prediction.
Misclassified lesions of the validation set. Time of follow up (FU) is reported when the lesion is not in complete response.
| PZ | LES | REAL CLASS | Baseline Diameter | TP1 | Last FU | Time of FU |
|---|---|---|---|---|---|---|
| 1010 | 7 | R− | 33 | 10 | 33 | 6 months |
| 10 | R− | 33 | 13 | 33 | 6 months | |
| 1017 | 2 | R− | 44 | 28 | 32 | 6 months |
| 4 | R+ | 14 | 13 | 0 | CR | |
| 1001 | 1 | R+ | 11 | 6 | 0 | CR |
| 1015 | 4 | R+ | 28 | 18 | 12 | 9 months |
| 1016 | 2 | R+ | 40 | 33 | 23 | 9 months |
| 6 | R+ | 40 | 31 | 20 | 9 months |
Figure 3In patient 1027, our algorithm correctly classified a R+ 5 liver metastases that responded to therapy for 10 months and classified a R− 1 liver lesion (i.e., lesion 3) that showed a PD after 6 months of treatment. The red line in the graph represents the metastasis that went in progression before 8 months, while green lines represent metastases that respond for at least 8 months. The table lists the patient’s liver metastases, size at baseline, and subsequent timepoints. The real and predicted class columns show the 8-month response of each lesion based on size variations and the classification as predicted by the classifiers.
Figure 4In patient 1016, our algorithm correctly classified a R+ 4/6 lesions while 2/6 lesions were misclassified as R−. The red line in the graph represents the metastasis that went into progression before 8 months, while the green lines represent metastases that responded for at least 8 months The table lists the patient’s liver metastases, size at baseline, and subsequent timepoints. The real and predicted class columns show respectively the 8-month response of each lesion based on size variations and the classification as predicted by the classifiers.