| Literature DB >> 35003325 |
Chenyu Ma1, Jianlong Wang2, Na Zhao3, Zhenya Pan3, Yi Lu4, Miao Cheng5, Min Deng3.
Abstract
Zhuling Jisheng decoction is employed for the treatment of bladder urothelial cancer in clinical practice of traditional Chinese medicine. However, there are few studies on its precise mechanism. For the antibladder cancer action of Zhuling Jisheng decoction, a network pharmacological technique was used to design a component/target/pathway molecular regulatory network. The TCMSP dataset was used to identify the chemical makeup of Zhuling Jisheng decoction, which was then analyzed and assessed for oral bioavailability and pharmacological similarity. The chemical composition of Zhuling Jisheng decoction was identified through the TCMSP database, and it was evaluated and screened based on oral bioavailability and drug similarity. The GEO database was searched for genes associated with urothelial bladder carcinoma, and gene targets associated with bladder urothelial cancer resistance were chosen by comparison. The function and linked pathways of the target genes were examined and screened using annotation, visualization, and a comprehensive discovery database. The impact of Zhuling Jisheng decoction on urothelial bladder cancer was studied using Cytoscape software to create a component/target/pathway network. Finally, 69 and 55 target genes were discovered for noninvasive bladder urothelial cancer and invasive bladder urothelial cancer, respectively. In noninvasive urothelial cancer, 118 pathways were highly enriched, including the TNF signaling pathway and the IL-17 signaling route. 103 pathways were highly enriched in invasive urothelial cancer, including the p53 signaling route, bladder cancer route, and calcium signaling route. There were 18 and 15 drug targets associated with noninvasive and invasive bladder urothelial carcinoma prognoses. Many signaling pathways directly act on tumours, and indirect pathways inhibit the development of bladder urothelial carcinoma. This research establishes a scientific foundation for further research into the framework of action of Zhuling Jisheng decoction in the therapy of bladder urothelial cancer.Entities:
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Year: 2021 PMID: 35003325 PMCID: PMC8741376 DOI: 10.1155/2021/7667707
Source DB: PubMed Journal: Comput Math Methods Med ISSN: 1748-670X Impact factor: 2.238
The main chemicals in compound ZLJSD.
| Medical herbs | Mol ID | Compounds | MW | Structures | Composition |
|---|---|---|---|---|---|
| Baihuasheshecao ( | MOL001659 | Poriferasterol | 412.69 |
| C29H48O |
| Baihuasheshecao ( | MOL001670 | 2-Methoxy-3-methyl-9,10-anthraquinoe | 252.28 |
| C16H12O3 |
| Baihuasheshecao ( | MOL000449 | Stigmasterol | 412.69 |
| C29H48O |
| Baihuasheshecao ( | MOL000358 | Beta-sitosterol | 414.71 |
| C29H50O |
| Baihuasheshecao ( | MOL000098 | Quercetin | 302.24 |
| C15H10O7 |
| Sangjisheng ( | MOL000359 | Sitosterol | 414.71 |
| C29H50O |
| Shancigu ( | MOL000098 | Quercetin | 302.24 |
| C15H10O7 |
| Shancigu ( | MOL000358 | Beta-sitosterol | 414.71 |
| C29H50O |
| Shancigu ( | MOL000449 | Stigmasterol | 412.69 |
| C29H48O |
| Shancigu ( | MOL007991 | 2-Methoxy-9,10-dihydrophenanthrene-4,5-diol | 242.09 |
| C15H14O3 |
| Shayuanzi ( | MOL000184 | NSC63551 | 412.69 |
| C29H48O |
| Shayuanzi ( | MOL000358 | Beta-sitosterol | 414.71 |
| C29H50O |
| Shayuanzi ( | MOL000392 | Formononetin | 268.27 |
| C16H12O4 |
| Shayuanzi ( | MOL000417 | Calycosin | 284.26 |
| C16H12O5 |
| Shayuanzi ( | MOL004564 | Kaempferia | 300.26 |
| C16H12O6 |
| Shayuanzi ( | MOL009278 | Laricitrin | 332.263 |
| C16H12O8 |
| Shayuanzi ( | MOL009289 | Calycosin-7-O-beta-D-glucopyranoside | 446.41 |
| C22H22O10 |
| Shayuanzi ( | MOL000098 | Quercetin | 302.24 |
| C15H10O7 |
| Zhuling ( | MOL000279 | Cerevisterol | 430.66 |
| C28H46O3 |
| Zhuling ( | MOL000282 | Ergosta-7,22E-dien-3beta-ol | 398.66 |
| C28H46O |
| Zhuling ( | MOL000797 | (22e,24r)-Ergosta-7,22-dien-3-one | 396.72 |
| C30H30O |
| Zhuling ( | MOL000798 | Ergosta-7,22-diene-3 | 398.66 |
| C28H46O |
| Zhuling ( | MOL000816 | Ergosta-7,22-dien-3-one | 396.66 |
| C28H44O |
| Zhuling ( | MOL000817 | Ergosta-5,7,22-trien-3-ol | 396.66 |
| C28H44O |
| Zhuling ( | MOL000822 | Polyporusterone G | 458.68 |
| C29H46O4 |
MW: molecular weight.
Figure 1Heat map of the distinctly expressed genes. The color dots reflect the genes expressed substantially. Red represents upregulated genes and blue represents downregulated genes. (a) Normal samples with noninvasive BLCA, (b) normal samples with invasive BLCA, and (c) invasive sample with noninvasive BLCA sample.
Figure 2Construction of the candidate-target network for ZLJSD against BLCA. (a) ZLJSD treatment of noninvasive BLCA and (b) ZLJSD treatment invasive BLCA. The pink represents targets; the yellow, blue, gray, purple, green, and rose-red represent the compounds from Astragali Cpmplanatisemen, Polyporus Umbellatus (Pers) Fr., multiple drugs, Hedyotis Diffusa Herba, Herba Taxilli, and Pseudobulbus Cremastrae Seu Pleiones, respectively.
Targets of ZLJSD in noninvasive and invasive bladder urothelial carcinoma.
| Names | Total | Elements |
|---|---|---|
| Invasive BLCA & noninvasive BLCA | 39 | PTGER3, MMP2, CDK1, FOS, PRKCB, NR3C2, RXRA, PPARG, PTGS1, F3, CHEK2, BCL2, CCL2, PRKCA, SLC2A4, IL-6, PTGS2, BIRC5, PPP3CA, TP63, CCNB1, ADRA2A, CYP1B1, CXCL2, F7, ADH1C, KCNH2, CHRM3, ADRA1D, CAV1, JUN, PGR, CHRM2, RUNX1T1, CCNA2, CASP8, ERBB3, CALM1, and MAOB |
| Noninvasive BLCA | 30 | CYP1A2, PPARD, NFKBIA, IGFBP3, CHUK, COL3A1, IGF2, RELA, VCAM1, COL1A1, CYP3A4, TNFSF15, SCN5A, PLAT, SLPI, NCF1, SLC6A4, IKBKB, DPP4, HAS2, MMP3, IL-1B, ICAM1, SELE, IRF1, SOD1, ODC1, PCOLCE, ADRA1B, and GJA1 |
| Invasive BLCA | 16 | IL-4, CHEK1, ACACA, EIF6, MMP1, STAT1, PSMD3, ADRB2, VEGFA, TOP2A, CDK2, AHR, CASP3, E2F1, E2F2, and ERBB2 |
Figure 3PPI network analysis of the potential ZLJSD target genes for BLCA therapy. (a) Demonstrates the target protein PPI network of ZLJSD in noninvasive BLCA targets. (b) Illustrates the analysis of MCODE just after the construction of the ZLJSD target protein PPI while (c) illustrates the ZLJSD invasive BLCA PPI network target protein. (d) Illustrates the MCODE test after the ZLJSD target protein PPI has been constructed.
Figure 4Gene ontology terms for potential ZLJSD targets against BLCA. The top eight GO functional categories were chosen, with an FDR of 0.05 (a) in the noninvasive BLCA, (b) in the invasive BLCA, BP for the biological process, (c) for cellular component, MF for molecular function.
Figure 5Enrichment of putative ZLJSD targets with BLCA by the KEGG pathway. Pathways have been found that have substantial alterations in FDR < 0.05. The spot size is the frequency of genes as well as the color is FDR, (a) in BLCA and (b) in noninvasive BLCA.
KEGG pathway analysis. 93 frequent approaches of treating noninvasive and invasive BLCAs for KEGG are enhanced.
| ID | Description | Gene ratio | Bg ratio |
|
|
| Gene ID | Count |
|---|---|---|---|---|---|---|---|---|
| hsa05161 | Hepatitis B | 14/54 | 162/8016 | 1.74 | 3.56 | 1.45 | BCL2/JUN/CASP3/CASP8/PRKCA/FOS/IL-6/STAT1/PRKCB/BIRC5/E2F1/E2F2/CDK2/CCNA2 | 14 |
| hsa04933 | AGE-RAGE signaling pathway in diabetic complications | 11/54 | 100/8016 | 3.99 | 4.09 | 1.66 | BCL2/JUN/CASP3/PRKCA/VEGFA/MMP2/IL-6/STAT1/F3/CCL2/PRKCB | 11 |
| hsa05167 | Kaposi sarcoma-associated herpes virus infection | 13/54 | 186/8016 | 1.79 | 1.23 | 4.97 | PTGS2/JUN/CASP3/CASP8/VEGFA/FOS/IL-6/STAT1/CXCL2/E2F1/E2F2/CALM1/PPP3CA | 13 |
| hsa04657 | IL-17 signaling pathway | 10/54 | 94/8016 | 4.73 | 2.42 | 9.83 | PTGS2/JUN/CASP3/CASP8/FOS/IL-6/MMP1/CCL2/CXCL2/IL-4 | 10 |
| hsa05163 | Human cytomegalovirus infection | 13/54 | 225/8016 | 1.90 | 7.80 | 3.16 | PTGS2/CASP3/CASP8/PRKCA/VEGFA/IL-6/CCL2/PTGER3/PRKCB/E2F1/E2F2/CALM1/PPP3CA | 13 |
| hsa04218 | Cellular senescence | 11/54 | 160/8016 | 6.48 | 2.22 | 8.99 | IL-6/CDK1/CCNB1/CHEK2/E2F1/E2F2/CDK2/CCNA2/CHEK1/CALM1/PPP3CA | 11 |
| hsa05170 | Human immunodeficiency virus 1 infection | 12/54 | 212/8016 | 1.11 | 3.24 | 1.32 | BCL2/JUN/CASP3/CASP8/PRKCA/FOS/CDK1/PRKCB/CCNB1/CHEK1/CALM1/PPP3CA | 12 |
| hsa04115 | p53 signaling pathway | 8/54 | 72/8016 | 2.13 | 5.46 | 2.21 | BCL2/CASP3/CASP8/CDK1/CCNB1/CHEK2/CDK2/CHEK1 | 8 |
| hsa04020 | Calcium signaling pathway | 11/54 | 193/8016 | 4.60 | 1.05 | 4.25 | CHRM3/CHRM2/ADRB2/ADRA1D/PRKCA/ERBB2/PTGER3/PRKCB/ERBB3/CALM1/PPP3CA | 11 |
| hsa05169 | Epstein-Barr virus infection | 11/54 | 201/8016 | 6.99 | 1.43 | 5.81 | BCL2/JUN/CASP3/CASP8/IL-6/STAT1/PSMD3/E2F1/E2F2/CDK2/CCNA2 | 11 |
| hsa05219 | Bladder cancer | 6/54 | 41/8016 | 2.64 | 4.91 | 1.99 | VEGFA/MMP2/MMP1/ERBB2/E2F1/E2F2 | 6 |
| hsa05031 | Amphetamine addiction | 7/54 | 69/8016 | 3.30 | 5.64 | 2.29 | MAOB/JUN/PRKCA/FOS/PRKCB/CALM1/PPP3CA | 7 |
| hsa04659 | Th17 cell differentiation | 8/54 | 107/8016 | 4.84 | 7.64 | 3.10 | RXRA/JUN/FOS/IL-6/STAT1/AHR/IL-4/PPP3CA | 8 |
| hsa04668 | TNF signaling pathway | 8/54 | 112/8016 | 6.89 | 9.85 | 3.99 | PTGS2/JUN/CASP3/CASP8/FOS/IL-6/CCL2/CXCL2 | 8 |
| hsa05206 | MicroRNAs in cancer | 12/54 | 310/8016 | 7.21 | 9.85 | 3.99 | PTGS2/BCL2/CASP3/PRKCA/VEGFA/TP63/ERBB2/PRKCB/CYP1B1/E2F1/E2F2/ERBB3 | 12 |
| hsa01521 | EGFR tyrosine kinase inhibitor resistance | 7/54 | 79/8016 | 8.42 | 1.08 | 4.37 | BCL2/PRKCA/VEGFA/IL-6/ERBB2/PRKCB/ERBB3 | 7 |
| hsa04110 | Cell cycle | 8/54 | 124/8016 | 1.50 | 1.80 | 7.28 | CDK1/CCNB1/CHEK2/E2F1/E2F2/CDK2/CCNA2/CHEK1 | 8 |
| hsa05166 | Human T-cell leukemia virus 1 infection | 10/54 | 219/8016 | 1.58 | 1.80 | 7.28 | JUN/FOS/IL-6/CHEK2/E2F1/E2F2/CDK2/CCNA2/CHEK1/PPP3CA | 10 |
| hsa05222 | Small cell lung cancer | 7/54 | 92/8016 | 2.38 | 2.57 | 1.04 | PTGS2/RXRA/BCL2/CASP3/E2F1/E2F2/CDK2 | 7 |
| hsa05323 | Rheumatoid arthritis | 7/54 | 93/8016 | 2.56 | 2.62 | 1.06 | JUN/VEGFA/FOS/IL-6/MMP1/CCL2/CXCL2 | 7 |
| hsa05162 | Measles | 8/54 | 138/8016 | 3.36 | 3.28 | 1.33 | BCL2/JUN/CASP3/CASP8/FOS/IL-6/STAT1/CDK2 | 8 |
| hsa01522 | Endocrine resistance | 7/54 | 98/8016 | 3.64 | 3.39 | 1.38 | BCL2/JUN/FOS/MMP2/ERBB2/E2F1/E2F2 | 7 |
| hsa05223 | Non-small cell lung cancer | 6/54 | 66/8016 | 4.68 | 4.18 | 1.69 | RXRA/PRKCA/ERBB2/PRKCB/E2F1/E2F2 | 6 |
| hsa04625 | C-type lectin receptor signaling pathway | 7/54 | 104/8016 | 5.42 | 4.63 | 1.88 | PTGS2/JUN/CASP8/IL-6/STAT1/CALM1/PPP3CA | 7 |
| hsa01524 | Platinum drug resistance | 6/54 | 73/8016 | 8.47 | 6.94 | 2.82 | BCL2/CASP3/CASP8/ERBB2/BIRC5/TOP2A | 6 |
| hsa05140 | Leishmaniasis | 6/54 | 77/8016 | 1.16 | 9.11 | 3.69 | PTGS2/JUN/FOS/STAT1/PRKCB/IL-4 | 6 |
| hsa04970 | Salivary secretion | 6/54 | 90/8016 | 2.84 | 0.000215397 | 8.74 | CHRM3/ADRB2/ADRA1D/PRKCA/PRKCB/CALM1 | 6 |
| hsa04370 | VEGF signaling pathway | 5/54 | 59/8016 | 4.36 | 0.000319433 | 0.000129578 | PTGS2/PRKCA/VEGFA/PRKCB/PPP3CA | 5 |
| hsa04215 | Apoptosis—multiple species | 4/54 | 32/8016 | 5.75 | 0.000398847 | 0.000161792 | BCL2/CASP3/CASP8/BIRC5 | 4 |
| hsa05205 | Proteoglycans in cancer | 8/54 | 204/8016 | 5.84 | 0.000398847 | 0.000161792 | CASP3/PRKCA/VEGFA/MMP2/ERBB2/CAV1/PRKCB/ERBB3 | 8 |
| hsa04921 | Oxytocin signaling pathway | 7/54 | 153/8016 | 6.71 | 0.000444038 | 0.000180123 | PTGS2/JUN/PRKCA/FOS/PRKCB/CALM1/PPP3CA | 7 |
| hsa05160 | Hepatitis C | 7/54 | 155/8016 | 7.29 | 0.00046711 | 0.000189483 | RXRA/CASP3/CASP8/STAT1/E2F1/E2F2/CDK2 | 7 |
| hsa04066 | HIF-1 signaling pathway | 6/54 | 109/8016 | 8.37 | 0.000519791 | 0.000210852 | BCL2/PRKCA/VEGFA/IL-6/ERBB2/PRKCB | 6 |
| hsa04725 | Cholinergic synapse | 6/54 | 112/8016 | 9.73 | 0.000586899 | 0.000238075 | CHRM3/CHRM2/BCL2/PRKCA/FOS/PRKCB | 6 |
| hsa04151 | PI3K-Akt signaling pathway | 10/54 | 354/8016 | 0.000104478 | 0.000611944 | 0.000248234 | RXRA/CHRM2/BCL2/PRKCA/VEGFA/IL-6/ERBB2/ERBB3/CDK2/IL-4 | 10 |
| hsa04726 | Serotonergic synapse | 6/54 | 115/8016 | 0.000112728 | 0.000641922 | 0.000260395 | PTGS1/PTGS2/MAOB/CASP3/PRKCA/PRKCB | 6 |
| hsa05164 | Influenza A | 7/54 | 170/8016 | 0.000130414 | 0.000722567 | 0.000293108 | CASP3/CASP8/PRKCA/IL-6/STAT1/CCL2/PRKCB | 7 |
| hsa04010 | MAPK signaling pathway | 9/54 | 295/8016 | 0.000135506 | 0.00072873 | 0.000295608 | JUN/CASP3/PRKCA/VEGFA/FOS/ERBB2/PRKCB/ERBB3/PPP3CA | 9 |
| hsa05214 | Glioma | 5/54 | 75/8016 | 0.000138636 | 0.00072873 | 0.000295608 | PRKCA/PRKCB/E2F1/E2F2/CALM1 | 5 |
| hsa05133 | Pertussis | 5/54 | 76/8016 | 0.000147646 | 0.000738228 | 0.000299461 | JUN/CASP3/FOS/IL-6/CALM1 | 5 |
| hsa05212 | Pancreatic cancer | 5/54 | 76/8016 | 0.000147646 | 0.000738228 | 0.000299461 | VEGFA/STAT1/ERBB2/E2F1/E2F2 | 5 |
| hsa05152 | Tuberculosis | 7/54 | 180/8016 | 0.000186086 | 0.000908277 | 0.000368441 | BCL2/CASP3/CASP8/IL-6/STAT1/CALM1/PPP3CA | 7 |
| hsa04621 | NOD-like receptor signaling pathway | 7/54 | 181/8016 | 0.000192575 | 0.00091809 | 0.000372422 | BCL2/JUN/CASP8/IL-6/STAT1/CCL2/CXCL2 | 7 |
| hsa04114 | Oocyte meiosis | 6/54 | 128/8016 | 0.000203229 | 0.000946864 | 0.000384094 | PGR/CDK1/CCNB1/CDK2/CALM1/PPP3CA | 6 |
| hsa04926 | Relaxin signaling pathway | 6/54 | 129/8016 | 0.000212049 | 0.000966002 | 0.000391857 | JUN/PRKCA/VEGFA/FOS/MMP2/MMP1 | 6 |
| hsa04728 | Dopaminergic synapse | 6/54 | 132/8016 | 0.000240337 | 0.001071065 | 0.000434476 | MAOB/PRKCA/FOS/PRKCB/CALM1/PPP3CA | 6 |
| hsa04012 | ErbB signaling pathway | 5/54 | 85/8016 | 0.000250398 | 0.001092162 | 0.000443034 | JUN/PRKCA/ERBB2/PRKCB/ERBB3 | 5 |
| hsa05210 | Colorectal cancer | 5/54 | 86/8016 | 0.000264505 | 0.001129656 | 0.000458243 | BCL2/JUN/CASP3/FOS/BIRC5 | 5 |
| hsa04210 | Apoptosis | 6/54 | 136/8016 | 0.000282596 | 0.001182288 | 0.000479593 | BCL2/JUN/CASP3/CASP8/FOS/BIRC5 | 6 |
| hsa04915 | Estrogen signaling pathway | 6/54 | 138/8016 | 0.00030581 | 0.001253821 | 0.00050861 | PGR/BCL2/JUN/FOS/MMP2/CALM1 | 6 |
| hsa04510 | Focal adhesion | 7/54 | 199/8016 | 0.000344429 | 0.001384471 | 0.000561608 | BCL2/JUN/PRKCA/VEGFA/ERBB2/CAV1/PRKCB | 7 |
| hsa04658 | Th1 and Th2 cell differentiation | 5/54 | 92/8016 | 0.000362266 | 0.001415656 | 0.000574258 | JUN/FOS/STAT1/IL-4/PPP3CA | 5 |
| hsa05203 | Viral carcinogenesis | 7/54 | 201/8016 | 0.000365999 | 0.001415656 | 0.000574258 | JUN/CASP3/CASP8/CDK1/CDK2/CCNA2/CHEK1 | 7 |
| hsa04912 | GnRH signaling pathway | 5/54 | 93/8016 | 0.000380906 | 0.001446032 | 0.000586581 | JUN/PRKCA/MMP2/PRKCB/CALM1 | 5 |
| hsa05224 | Breast cancer | 6/54 | 147/8016 | 0.000429481 | 0.001600791 | 0.000649358 | PGR/JUN/FOS/ERBB2/E2F1/E2F2 | 6 |
| hsa05226 | Gastric cancer | 6/54 | 149/8016 | 0.000461636 | 0.001664529 | 0.000675213 | RXRA/BCL2/ERBB2/E2F1/E2F2/CDK2 | 6 |
| hsa05215 | Prostate cancer | 5/54 | 97/8016 | 0.00046282 | 0.001664529 | 0.000675213 | BCL2/ERBB2/E2F1/E2F2/CDK2 | 5 |
| hsa04923 | Regulation of lipolysis in adipocytes | 4/54 | 55/8016 | 0.000486421 | 0.001719247 | 0.000697409 | PTGS1/PTGS2/ADRB2/PTGER3 | 4 |
| hsa04914 | Progesterone-mediated oocyte maturation | 5/54 | 99/8016 | 0.000508446 | 0.001766634 | 0.000716632 | PGR/CDK1/CCNB1/CDK2/CCNA2 | 5 |
| hsa05134 | Legionellosis | 4/54 | 57/8016 | 0.000557794 | 0.001905798 | 0.000773083 | CASP3/CASP8/IL-6/CXCL2 | 4 |
| hsa05142 | Chagas disease (American trypanosomiasis) | 5/54 | 102/8016 | 0.00058314 | 0.001928126 | 0.000782141 | JUN/CASP8/FOS/IL-6/CCL2 | 5 |
| hsa05146 | Amoebiasis | 5/54 | 102/8016 | 0.00058314 | 0.001928126 | 0.000782141 | CASP3/PRKCA/IL-6/PRKCB/CXCL2 | 5 |
| hsa04620 | Toll-like receptor signaling pathway | 5/54 | 104/8016 | 0.000637332 | 0.002073857 | 0.000841257 | JUN/CASP8/FOS/IL-6/STAT1 | 5 |
| hsa04928 | Parathyroid hormone synthesis, secretion, and action | 5/54 | 106/8016 | 0.000695221 | 0.00222688 | 0.00090333 | RXRA/BCL2/PRKCA/FOS/PRKCB | 5 |
| hsa05321 | Inflammatory bowel disease (IBD) | 4/54 | 65/8016 | 0.000918763 | 0.002897638 | 0.001175422 | JUN/IL-6/STAT1/IL-4 | 4 |
| hsa04720 | Long-term potentiation | 4/54 | 67/8016 | 0.001029849 | 0.003198774 | 0.001297577 | PRKCA/PRKCB/CALM1/PPP3CA | 4 |
| hsa05165 | Human papillomavirus infection | 8/54 | 330/8016 | 0.001505195 | 0.004605448 | 0.001868192 | PTGS2/CASP3/CASP8/VEGFA/STAT1/E2F1/CDK2/CCNA2 | 8 |
| hsa04971 | Gastric acid secretion | 4/54 | 75/8016 | 0.001569477 | 0.00473151 | 0.001919329 | CHRM3/PRKCA/PRKCB/CALM1 | 4 |
| hsa04380 | Osteoclast differentiation | 5/54 | 128/8016 | 0.001623043 | 0.004822084 | 0.00195607 | JUN/PPARG/FOS/STAT1/PPP3CA | 5 |
| hsa04960 | Aldosterone-regulated sodium reabsorption | 3/54 | 37/8016 | 0.00190982 | 0.005514268 | 0.002236853 | NR3C2/PRKCA/PRKCB | 3 |
| hsa05143 | African trypanosomiasis | 3/54 | 37/8016 | 0.00190982 | 0.005514268 | 0.002236853 | PRKCA/IL-6/PRKCB | 3 |
| hsa04662 | B cell receptor signaling pathway | 4/54 | 82/8016 | 0.002181418 | 0.006210983 | 0.002519474 | JUN/FOS/PRKCB/PPP3CA | 4 |
| hsa05235 | PD-L1 expression and PD-1 checkpoint pathway in cancer | 4/54 | 89/8016 | 0.002941331 | 0.008259901 | 0.003350615 | JUN/FOS/STAT1/PPP3CA | 4 |
| hsa05132 | Salmonella infection | 6/54 | 214/8016 | 0.002993412 | 0.008292561 | 0.003363863 | BCL2/JUN/CASP3/CASP8/FOS/IL-6 | 6 |
| hsa04024 | cAMP signaling pathway | 6/54 | 216/8016 | 0.003134975 | 0.008396427 | 0.003405996 | CHRM2/ADRB2/JUN/FOS/PTGER3/CALM1 | 6 |
| hsa04261 | Adrenergic signaling in cardiomyocytes | 5/54 | 149/8016 | 0.00315378 | 0.008396427 | 0.003405996 | ADRB2/ADRA1D/BCL2/PRKCA/CALM1 | 5 |
| hsa04932 | Nonalcoholic fatty liver disease (NAFLD) | 5/54 | 149/8016 | 0.00315378 | 0.008396427 | 0.003405996 | RXRA/JUN/CASP3/CASP8/IL-6 | 5 |
| hsa04713 | Circadian entrainment | 4/54 | 97/8016 | 0.004011834 | 0.010543923 | 0.004277124 | PRKCA/FOS/PRKCB/CALM1 | 4 |
| hsa05231 | Choline metabolism in cancer | 4/54 | 98/8016 | 0.004161902 | 0.010799873 | 0.00438095 | JUN/PRKCA/FOS/PRKCB | 4 |
| hsa04064 | NF-kappa B signaling pathway | 4/54 | 102/8016 | 0.004800227 | 0.012300582 | 0.00498971 | PTGS2/BCL2/PRKCB/CXCL2 | 4 |
| hsa04022 | cGMP-PKG signaling pathway | 5/54 | 167/8016 | 0.00512959 | 0.012857065 | 0.005215446 | ADRB2/ADRA1D/ADRA2A/CALM1/PPP3CA | 5 |
| hsa04660 | T cell receptor signaling pathway | 4/54 | 104/8016 | 0.005142826 | 0.012857065 | 0.005215446 | JUN/FOS/IL-4/PPP3CA | 4 |
| hsa05014 | Amyotrophic lateral sclerosis (ALS) | 3/54 | 57/8016 | 0.006541874 | 0.01615764 | 0.006554319 | BCL2/CASP3/PPP3CA | 3 |
| hsa05145 | Toxoplasmosis | 4/54 | 112/8016 | 0.006677299 | 0.016295788 | 0.006610358 | BCL2/CASP3/CASP8/STAT1 | 4 |
| hsa05202 | Transcriptional misregulation in cancer | 5/54 | 186/8016 | 0.008035734 | 0.0193803 | 0.007861585 | RXRA/PPARG/IL-6/RUNX1T1/CCNA2 | 5 |
| hsa04919 | Thyroid hormone signaling pathway | 4/54 | 119/8016 | 0.008247201 | 0.01943306 | 0.007882987 | RXRA/PRKCA/STAT1/PRKCB | 4 |
| hsa04935 | Growth hormone synthesis, secretion, and action | 4/54 | 119/8016 | 0.008247201 | 0.01943306 | 0.007882987 | PRKCA/FOS/STAT1/PRKCB | 4 |
| hsa04152 | AMPK signaling pathway | 4/54 | 120/8016 | 0.0084896 | 0.019554697 | 0.007932329 | PPARG/ACACA/SLC2A4/CCNA2 | 4 |
| hsa05135 | Yersinia infection | 4/54 | 120/8016 | 0.0084896 | 0.019554697 | 0.007932329 | JUN/FOS/IL-6/CCL2 | 4 |
| hsa04924 | Renin secretion | 3/54 | 69/8016 | 0.011069325 | 0.025102948 | 0.010182967 | ADRB2/CALM1/PPP3CA | 3 |
| hsa05130 | Pathogenic Escherichia coli infection | 5/54 | 202/8016 | 0.011245951 | 0.025102948 | 0.010182967 | JUN/CASP3/CASP8/FOS/IL-6 | 5 |
| hsa04068 | FoxO signaling pathway | 4/54 | 131/8016 | 0.011469853 | 0.025102948 | 0.010182967 | IL-6/CCNB1/SLC2A4/CDK2 | 4 |
| hsa04650 | Natural killer cell-mediated cytotoxicity | 4/54 | 131/8016 | 0.011469853 | 0.025102948 | 0.010182967 | CASP3/PRKCA/PRKCB/PPP3CA | 4 |
| hsa05120 | Epithelial cell signaling in Helicobacter pylori infection | 3/54 | 70/8016 | 0.01151062 | 0.025102948 | 0.010182967 | JUN/CASP3/CXCL2 | 3 |
| hsa04270 | Vascular smooth muscle contraction | 4/54 | 132/8016 | 0.011770178 | 0.025398806 | 0.010302982 | ADRA1D/PRKCA/PRKCB/CALM1 | 4 |
| hsa03320 | PPAR signaling pathway | 3/54 | 76/8016 | 0.014370984 | 0.030688039 | 0.01244855 | RXRA/PPARG/MMP1 | 3 |
| hsa05204 | Chemical carcinogenesis | 3/54 | 82/8016 | 0.017600508 | 0.03719695 | 0.015088878 | PTGS2/ADH1C/CYP1B1 | 3 |
| hsa04911 | Insulin secretion | 3/54 | 86/8016 | 0.019960958 | 0.041668682 | 0.016902829 | CHRM3/PRKCA/PRKCB | 3 |
| hsa04934 | Cushing syndrome | 4/54 | 155/8016 | 0.020122924 | 0.041668682 | 0.016902829 | AHR/E2F1/E2F2/CDK2 | 4 |
| hsa04540 | Gap junction | 3/54 | 88/8016 | 0.021203742 | 0.043467672 | 0.017632586 | PRKCA/CDK1/PRKCB | 3 |
| hsa04310 | Wnt signaling pathway | 4/54 | 160/8016 | 0.022321682 | 0.045306384 | 0.018378456 | JUN/PRKCA/PRKCB/PPP3CA | 4 |
| hsa04630 | JAK-STAT signaling pathway | 4/54 | 162/8016 | 0.023240916 | 0.046709685 | 0.018947703 | BCL2/IL-6/STAT1/IL-4 | 4 |
| hsa00350 | Tyrosine metabolism | 2/54 | 36/8016 | 0.024244872 | 0.048254357 | 0.019574296 | ADH1C/MAOB | 2 |
Figure 6ZLJSD gene-pathway network against BLCA. (a) In noninvasive BLCA, a topological study of 20 pathways and 34 genes was performed using betweenness centrality. Target genes are shown by blue ellipses, and pathways are represented by green ellipses. (b) Invasive BLCA performed a topological study of 20 pathways and 41 genes using betweenness centrality. The pink ellipses reflect pathways, whereas the green ellipses indicate target genes. The higher the size, the greater the centrality betweenness.
Figure 718 drug targets are associated with prognosis in noninvasive urothelial cancer.
Figure 815 drug targets associated with prognosis in invasive urothelial cancer.