Literature DB >> 34992679

Viscoelastic and Thermoreversible Networks Crosslinked by Non-covalent Interactions Between "Clickable" Nucleic Acids Oligomers and DNA.

Alex J Anderson1, Heidi R Culver1, Stephanie J Bryant1,2,3, Christopher N Bowman1,2,3.   

Abstract

An approach to efficient and scalable production of oligonucleotide-based gel networks is presented. Specifically, a new class of xenonucleic acid (XNA) synthesized through a scalable and efficient thiol-ene polymerization mechanism, "Clickable" Nucleic Acids (CNAs), were conjugated to a multifunctional poly(ethylene glycol), PEG. In the presence of complementary single stranded DNA (ssDNA), the macromolecular conjugate assembled into a crosslinked 3D gel capable of achieving storage moduli on the order of 1 kPa. Binding studies between the PEG-CNA macromolecule and complementary ssDNA indicate that crosslinking is due to the CNA/DNA interaction. Gel formation was specific to the base sequence and length of the ssDNA crosslinker. The gels were fully thermoreversible, completely melting at temperatures above 60°C and re-forming upon cooling over multiple cycles and with no apparent hysteresis. Shear stress relaxation experiments revealed that relaxation dynamics are dependent on crosslinker length, which is hypothesized to be an effect of the polydisperse CNA chains. Arrhenius analysis of characteristic relaxation times was only possible for shorter crosslinker lengths, and the activation energy for these gels was determined to be 110 ± 20 kJ/mol. Overall, the present work demonstrates that CNA is capable of participating in stimuli-responsive interactions that would be expected from XNAs, and that these interactions support 3D gels that have potential uses in biological and materials science applications.

Entities:  

Year:  2020        PMID: 34992679      PMCID: PMC8729761          DOI: 10.1039/d0py00165a

Source DB:  PubMed          Journal:  Polym Chem        ISSN: 1759-9954            Impact factor:   5.582


  33 in total

1.  Synthesis and characterization of thermoreversible biopolymer microgels based on hydrogen bonded nucleobase pairing.

Authors:  Rong Cao; Zhenyu Gu; Lorraine Hsu; Gary D Patterson; Bruce A Armitage
Journal:  J Am Chem Soc       Date:  2003-08-27       Impact factor: 15.419

Review 2.  The thermodynamics of DNA structural motifs.

Authors:  John SantaLucia; Donald Hicks
Journal:  Annu Rev Biophys Biomol Struct       Date:  2004

3.  Mechanical properties of a reversible, DNA-crosslinked polyacrylamide hydrogel.

Authors:  David C Lin; Bernard Yurke; Noshir A Langrana
Journal:  J Biomech Eng       Date:  2004-02       Impact factor: 2.097

4.  The relationship between fibroblast growth and the dynamic stiffnesses of a DNA crosslinked hydrogel.

Authors:  Frank X Jiang; Bernard Yurke; Rene S Schloss; Bonnie L Firestein; Noshir A Langrana
Journal:  Biomaterials       Date:  2009-11-20       Impact factor: 12.479

5.  Near-infrared light-responsive core-shell nanogels for targeted drug delivery.

Authors:  Huaizhi Kang; Anna Carolina Trondoli; Guizhi Zhu; Yan Chen; Ya-Jen Chang; Haipeng Liu; Yu-Fen Huang; Xiaoling Zhang; Weihong Tan
Journal:  ACS Nano       Date:  2011-05-17       Impact factor: 15.881

Review 6.  Biological applications of xeno nucleic acids.

Authors:  Kunihiko Morihiro; Yuuya Kasahara; Satoshi Obika
Journal:  Mol Biosyst       Date:  2017-01-31

7.  Stress relaxation function of bone and bone collagen.

Authors:  N Sasaki; Y Nakayama; M Yoshikawa; A Enyo
Journal:  J Biomech       Date:  1993-12       Impact factor: 2.712

8.  Biodegradable CpG DNA hydrogels for sustained delivery of doxorubicin and immunostimulatory signals in tumor-bearing mice.

Authors:  Makiya Nishikawa; Yumiko Mizuno; Kohta Mohri; Nao Matsuoka; Sakulrat Rattanakiat; Yuki Takahashi; Hisakage Funabashi; Dan Luo; Yoshinobu Takakura
Journal:  Biomaterials       Date:  2010-10-06       Impact factor: 12.479

9.  Clickable Nucleic Acids: Sequence-Controlled Periodic Copolymer/Oligomer Synthesis by Orthogonal Thiol-X Reactions.

Authors:  Weixian Xi; Sankha Pattanayak; Chen Wang; Benjamin Fairbanks; Tao Gong; Justine Wagner; Christopher J Kloxin; Christopher N Bowman
Journal:  Angew Chem Int Ed Engl       Date:  2015-10-12       Impact factor: 15.336

10.  Intelligent, Biodegradable, and Self-Healing Hydrogels Utilizing DNA Quadruplexes.

Authors:  Shizuma Tanaka; Kenta Wakabayashi; Kazuki Fukushima; Shinsuke Yukami; Ryuki Maezawa; Yuhei Takeda; Kohei Tatsumi; Yuichi Ohya; Akinori Kuzuya
Journal:  Chem Asian J       Date:  2017-08-29
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  1 in total

1.  Scalable One-Pot-Liquid-Phase Oligonucleotide Synthesis for Model Network Hydrogels.

Authors:  Guido Creusen; Cecilia Oluwadunsin Akintayo; Katja Schumann; Andreas Walther
Journal:  J Am Chem Soc       Date:  2020-09-16       Impact factor: 15.419

  1 in total

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