| Literature DB >> 34987958 |
Shiying Wu1, Ying Liu2, Yingna Chen1,3, Chengdang Xu2, Panpan Chen1, Mengjiao Zhang1, Wanli Ye1, Denglong Wu2, Shengsong Huang2, Qian Cheng1,3.
Abstract
Pathology is currently the gold standard for grading prostate cancer (PCa). However, pathology takes considerable time to provide a final result and is significantly dependent on subjective judgment. In this study, wavelet transform-based photoacoustic power spectrum analysis (WT-PASA) was used for grading PCa with different Gleason scores (GSs). The tumor region was accurately identified via wavelet transform time-frequency analysis. Then, a linear fitting was conducted on the photoacoustic power spectrum curve of the tumor region to obtain the quantified spectral parameter slope. The results showed that high GSs have small glandular cavity structures and higher heterogeneity, and consequently, the slopes at both 1210 nm and 1310 nm were high (p < 0.01). The classification accuracy of the PA time frequency spectrum (PA-TFS) of tumor region using ResNet-18 was 89% at 1210 nm and 92.7% at 1310 nm. Further, the testing time was less than 7 mins. The results demonstrated that identification of PCa can be rapidly and objectively realized using WT-PASA.Entities:
Keywords: Photoacoustic measurement; Photoacoustic power spectrum analysis; Prostate cancer grading; ResNet-18 network; Wavelet transform
Year: 2021 PMID: 34987958 PMCID: PMC8695359 DOI: 10.1016/j.pacs.2021.100327
Source DB: PubMed Journal: Photoacoustics ISSN: 2213-5979
Fig. 1Newly modified Gleason grading diagram presented in the ISUP publication [50].
Sample size.
| Method | Normal | GS= 6 | GS= 7 | GS= 8 |
|---|---|---|---|---|
| PASA (samples) | 34 | 10 | 6 | 6 |
| ResNet-18 (images) | 340 | 100 | 60 | 60 |
Fig. 2Ex vivo experimental measurement setup. (a) PA measurement setup. (b) PA signal acquisition device. (c) Typical PA time-domain signal of human prostate cancer biopsy needle strip at 1210 nm (Gleason score = 7). (d) Typical PA time-domain signal of human prostate cancer biopsy needle strip at 1310 nm (Gleason score=7). (red arrows in c and d mean the signal start point.). (For interpretation of the references to colour in this figure, the reader is referred to the web version of this article.)
Fig. 3PA signal processing. (a) Typical PA time-domain signal of human PCa biopsy needle strip. (b) PWMF curve of the effective signal. (c) Corresponding PA time-frequency spectrum (PA-TFS) of the tumor region. (d) The block diagram of the PA signal processing.
Fig. 4(a) The residual block (b) The fully connected layers. (c) ResNet-18 architecture.
Fig. 5Representative pathology of (a)-(c) HE staining for different GSs. (d)-(f) Masson staining for different GSs. (g)-(i) Nile red staining for different GSs.
Fig. 6Results of ex vivo PASA of different GS tissues at two wavelength of 1210 nm and 1310 nm. (a) Typical photoacoustic power spectrum analysis (PASA) of different GS (GS6, =7, and =8) at the wavelength of 1210 nm. (b) Statistic result of quantified PASA parameters slope in different GS at 1210 nm. (c) Representative PASA parameters slope of different GS (GS6, =7, and =8) at the wavelength of 1310 nm. (d) Statistic result of quantified PASA parameters slope in different GS at 1210 nm, n represent the sample size. (**** p < 0.0001, ** p < 0.01, * p < 0.1, ns: not statistically significant.).
The number of images in dataset.
| Normal | GS = 6 | GS = 7 | GS = 8 | |
|---|---|---|---|---|
| Label | 0 | 1 | 2 | 3 |
| Traning setValidation setTest setTotal images | 2723434340 | 801010100 | 486660 | 486660 |
Fig. 7ResNet-18 network classification results of different GSs at 1210 nm and 1310 nm. (a) Confusion matrix of normal and different GSs (GS = 6, 7 and 8) tissues at 1210 nm (total accuracy of 89.3%). (b) Confusion matrix of normal and different GSs (GS = 6, 7 and 8) tissues at 1310 nm (total accuracy of 92.7%).
Power study results based on slopes of photoacoustic power spectrum at 1210 nm.
| Target power | Actual power | Average n | G (group) | Total N | K (means multiplier) | Std Dev of | Standard Deviation | Effect Size | Alpha |
|---|---|---|---|---|---|---|---|---|---|
| 0.7 | 0.7866 | 6 | 3 | 18 | 1 | 0.67 | 0.66 | 1.0194 | 0.01 |
| 0.8 | 0.8828 | 7 | 3 | 21 | 1 | 0.67 | 0.66 | 1.0194 | 0.01 |
| 0.9 | 0.9393 | 8 | 3 | 24 | 1 | 0.67 | 0.66 | 1.0194 | 0.01 |
| 0.7 | 0.76 | 4 | 3 | 12 | 1 | 0.67 | 0.66 | 1.0194 | 0.05 |
| 0.8 | 0.8825 | 5 | 3 | 15 | 1 | 0.67 | 0.66 | 1.0194 | 0.05 |
| 0.9 | 0.9461 | 6 | 3 | 18 | 1 | 0.67 | 0.66 | 1.0194 | 0.05 |
Power study results based on slopes of photoacoustic power spectrum at 1310 nm.
| Target power | Actual power | Average n | G (group) | Total N | K (means multiplier) | Std Dev of | Standard Deviation | Effect Size | Alpha |
|---|---|---|---|---|---|---|---|---|---|
| 0.7 | 0.7847 | 8 | 3 | 24 | 1 | 0.34 | 0.4 | 0.8399 | 0.01 |
| 0.8 | 0.8556 | 9 | 3 | 27 | 1 | 0.34 | 0.4 | 0.8399 | 0.01 |
| 0.9 | 0.9059 | 10 | 3 | 30 | 1 | 0.34 | 0.4 | 0.8399 | 0.01 |
| 0.7 | 0.7273 | 5 | 3 | 15 | 1 | 0.34 | 0.4 | 0.8399 | 0.05 |
| 0.8 | 0.8281 | 6 | 3 | 18 | 1 | 0.34 | 0.4 | 0.8399 | 0.05 |
| 0.9 | 0.938 | 8 | 3 | 24 | 1 | 0.34 | 0.4 | 0.8399 | 0.05 |