Literature DB >> 34985744

Measurement of Transcription, Translation, and Other Enzymatic Processes During Cell-Free Expression Using PERSIA.

Scott Wick1,2, Peter A Carr3,4.   

Abstract

We developed the PERSIA technique with an interest in quantifying proteins as they are being produced during a cell-free synthesis reaction. A short 6-amino acid sequence added to a protein of interest reacts with a fluorogenic reagent (ReAsH), yielding a measure of protein concentration in close to real time. We combine this measurement with simultaneous fluorescent detection of mRNA production, quantifying both transcription and translation. Alternatively, we combine simultaneous measurement of protein synthesis and that protein's enzymatic activity. We have found these simple capabilities enabling for multiple applications, including sequence-structure-function studies and target-specific assessment of drug candidate compounds.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Cell-free synthesis; Fluorescent label; PERSIA; Protein quantitation; Transcription; Translation

Mesh:

Substances:

Year:  2022        PMID: 34985744     DOI: 10.1007/978-1-0716-1998-8_10

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  12 in total

1.  Binary malachite green aptamer for fluorescent detection of nucleic acids.

Authors:  Dmitry M Kolpashchikov
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Review 2.  Understanding the folding of GFP using biophysical techniques.

Authors:  Sophie E Jackson; Timothy D Craggs; Jie-rong Huang
Journal:  Expert Rev Proteomics       Date:  2006-10       Impact factor: 3.940

Review 3.  Green fluorescent protein: structure, folding and chromophore maturation.

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4.  PURE technology.

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5.  PERSIA for Direct Fluorescence Measurements of Transcription, Translation, and Enzyme Activity in Cell-Free Systems.

Authors:  Scott Wick; David I Walsh; Johanna Bobrow; Kimberly Hamad-Schifferli; David S Kong; Todd Thorsen; Keri Mroszczyk; Peter A Carr
Journal:  ACS Synth Biol       Date:  2019-04-30       Impact factor: 5.110

6.  RNA mimics of green fluorescent protein.

Authors:  Jeremy S Paige; Karen Y Wu; Samie R Jaffrey
Journal:  Science       Date:  2011-07-29       Impact factor: 47.728

7.  Short tetracysteine tags to beta-tubulin demonstrate the significance of small labels for live cell imaging.

Authors:  Martin Andresen; Rita Schmitz-Salue; Stefan Jakobs
Journal:  Mol Biol Cell       Date:  2004-10-06       Impact factor: 4.138

8.  RNA mango aptamer-fluorophore: a bright, high-affinity complex for RNA labeling and tracking.

Authors:  Elena V Dolgosheina; Sunny C Y Jeng; Shanker Shyam S Panchapakesan; Razvan Cojocaru; Patrick S K Chen; Peter D Wilson; Nancy Hawkins; Paul A Wiggins; Peter J Unrau
Journal:  ACS Chem Biol       Date:  2014-08-21       Impact factor: 5.100

9.  Broccoli: rapid selection of an RNA mimic of green fluorescent protein by fluorescence-based selection and directed evolution.

Authors:  Grigory S Filonov; Jared D Moon; Nina Svensen; Samie R Jaffrey
Journal:  J Am Chem Soc       Date:  2014-11-05       Impact factor: 15.419

10.  Automated design of synthetic ribosome binding sites to control protein expression.

Authors:  Howard M Salis; Ethan A Mirsky; Christopher A Voigt
Journal:  Nat Biotechnol       Date:  2009-10-04       Impact factor: 54.908

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