Literature DB >> 17078767

Understanding the folding of GFP using biophysical techniques.

Sophie E Jackson1, Timothy D Craggs, Jie-rong Huang.   

Abstract

Green fluorescent protein (GFP) and its many variants are probably the most widely used proteins in medical and biological research, having been extensively engineered to act as markers of gene expression and protein localization, indicators of protein-protein interactions and biosensors. GFP first folds, before it can undergo an autocatalytic cyclization and oxidation reaction to form the chromophore, and in many applications the folding efficiency of GFP is known to limit its use. Here, we review the recent literature on protein engineering studies that have improved the folding properties of GFP. In addition, we discuss in detail the biophysical work on the folding of GFP that is beginning to reveal how this large and complex structure forms.

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Year:  2006        PMID: 17078767     DOI: 10.1586/14789450.3.5.545

Source DB:  PubMed          Journal:  Expert Rev Proteomics        ISSN: 1478-9450            Impact factor:   3.940


  16 in total

1.  Cotranslational folding increases GFP folding yield.

Authors:  Krastyu G Ugrinov; Patricia L Clark
Journal:  Biophys J       Date:  2010-04-07       Impact factor: 4.033

Review 2.  Fluorescent proteins and their use in marine biosciences, biotechnology, and proteomics.

Authors:  Gabor Mocz
Journal:  Mar Biotechnol (NY)       Date:  2007-03-19       Impact factor: 3.619

3.  The rough energy landscape of superfolder GFP is linked to the chromophore.

Authors:  Benjamin T Andrews; Andrea R Schoenfish; Melinda Roy; Geoffrey Waldo; Patricia A Jennings
Journal:  J Mol Biol       Date:  2007-08-15       Impact factor: 5.469

4.  The extremely slow-exchanging core and acid-denatured state of green fluorescent protein.

Authors:  Jie-Rong Huang; Shang-Te Danny Hsu; John Christodoulou; Sophie E Jackson
Journal:  HFSP J       Date:  2008-09-15

5.  PERSIA for Direct Fluorescence Measurements of Transcription, Translation, and Enzyme Activity in Cell-Free Systems.

Authors:  Scott Wick; David I Walsh; Johanna Bobrow; Kimberly Hamad-Schifferli; David S Kong; Todd Thorsen; Keri Mroszczyk; Peter A Carr
Journal:  ACS Synth Biol       Date:  2019-04-30       Impact factor: 5.110

6.  Green-lighting green fluorescent protein: faster and more efficient folding by eliminating a cis-trans peptide isomerization event.

Authors:  David J Rosenman; Yao-ming Huang; Ke Xia; Keith Fraser; Victoria E Jones; Colleen M Lamberson; Patrick Van Roey; Wilfredo Colón; Christopher Bystroff
Journal:  Protein Sci       Date:  2014-01-30       Impact factor: 6.725

7.  Measurement of Transcription, Translation, and Other Enzymatic Processes During Cell-Free Expression Using PERSIA.

Authors:  Scott Wick; Peter A Carr
Journal:  Methods Mol Biol       Date:  2022

8.  Complementation and reconstitution of fluorescence from circularly permuted and truncated green fluorescent protein.

Authors:  Yao-ming Huang; Christopher Bystroff
Journal:  Biochemistry       Date:  2009-02-10       Impact factor: 3.162

9.  Folding study of Venus reveals a strong ion dependence of its yellow fluorescence under mildly acidic conditions.

Authors:  Shang-Te Danny Hsu; Georg Blaser; Caroline Behrens; Lisa D Cabrita; Christopher M Dobson; Sophie E Jackson
Journal:  J Biol Chem       Date:  2009-11-09       Impact factor: 5.157

Review 10.  Beta-barrel scaffold of fluorescent proteins: folding, stability and role in chromophore formation.

Authors:  Olesya V Stepanenko; Olga V Stepanenko; Irina M Kuznetsova; Vladislav V Verkhusha; Konstantin K Turoverov
Journal:  Int Rev Cell Mol Biol       Date:  2013       Impact factor: 6.813

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