| Literature DB >> 34977321 |
Abagael L Sykes1, Edmundo Larrieu2,3, Thelma Verónica Poggio4, M Graciela Céspedes5, Guillermo B Mujica6, Maria-Gloria Basáñez1, Joaquin M Prada7.
Abstract
Echinococcus granulosus sensu lato is a globally prevalent zoonotic parasitic cestode leading to cystic echinococcosis (CE) in both humans and sheep with both medical and financial impacts, whose reduction requires the application of a One Health approach to its control. Regarding the animal health component of this approach, lack of accurate and practical diagnostics in livestock impedes the assessment of disease burden and the implementation and evaluation of control strategies. We use of a Bayesian Latent Class Analysis (LCA) model to estimate ovine CE prevalence in sheep samples from the Río Negro province of Argentina accounting for uncertainty in the diagnostics. We use model outputs to evaluate the performance of a novel recombinant B8/2 antigen B subunit (rEgAgB8/2) indirect enzyme-linked immunosorbent assay (ELISA) for detecting E. granulosus in sheep. Necropsy (as a partial gold standard), western blot (WB) and ELISA diagnostic data were collected from 79 sheep within two Río Negro slaughterhouses, and used to estimate individual infection status (assigned as a latent variable within the model). Using the model outputs, the performance of the novel ELISA at both individual and flock levels was evaluated, respectively, using a receiver operating characteristic (ROC) curve, and simulating a range of sample sizes and prevalence levels within hypothetical flocks. The estimated (mean) prevalence of ovine CE was 27.5% (95%Bayesian credible interval (95%BCI): 13.8%-58.9%) within the sample population. At the individual level, the ELISA had a mean sensitivity and specificity of 55% (95%BCI: 46%-68%) and 68% (95%BCI: 63%-92%), respectively, at an optimal optical density (OD) threshold of 0.378. At the flock level, the ELISA had an 80% probability of correctly classifying infection at an optimal cut-off threshold of 0.496. These results suggest that the novel ELISA could play a useful role as a flock-level diagnostic for CE surveillance in the region, supplementing surveillance activities in the human population and thus strengthening a One Health approach. Importantly, selection of ELISA cut-off threshold values must be tailored according to the epidemiological situation.Entities:
Keywords: Argentina; BCI, Bayesian Credible Interval; Bayesian inference; CE, Cystic Echinococcosis; CI, Confidence Interval; DALY, Disability-adjusted life year; Diagnostics; ELISA, Enzyme-Linked Immunosorbent Assay; Echinococcosis; JAGS, Just Another Gibbs Sampler; LCA, Latent class analysis; Latent class analysis; MCAR, Missing completely at random; MCMC, Markov Chain Monte Carlo; OD, Optical density; ROC, Receiver Operating Characteristic; SD, Standard deviation; Surveillance; USD, United States Dollar; WB, Western blot; WHO, World Health Organization.
Year: 2021 PMID: 34977321 PMCID: PMC8683760 DOI: 10.1016/j.onehlt.2021.100359
Source DB: PubMed Journal: One Health ISSN: 2352-7714
Descriptive statistics of the diagnostics used in a sample of 79 sheep from two slaughterhouses in the Río Negro province, Argentina, for detection of Echinococcus granulosus.
| Result | Necropsy | ELISA optical Density (OD) | Western blot (WB) |
|---|---|---|---|
| Positive | 15 (19.0) | NA | 19 (24.0) |
| Negative | 48 (60.8) | NA | 21 (26.6) |
| Unknown a | 2 (2.5) | NA | 39 (49.4) |
| Other infections b | 14 (17.7) | NA | NA |
| Mean | NA | 0.399 | NA |
| Standard deviation | NA | 0.168 | NA |
| Range | NA | 0.199–1.176 | NA |
a = missing values (indeterminate results were assumed to be missing); b = other infections detected during necropsy: Taenia hydatigena (12/14), Thysanosoma actinioides (1/14) and Fasciola hepatica (1/14). NA = not applicable.
Outputs of the Latent Class Analysis model summarised as the means and their 95% Bayesian Credible Intervals (95%BCI) obtained from the posterior distributions.
| Output | Model estimates (95%BCI) |
|---|---|
| CE prevalence (%) | 27.5 (13.8–58.9) |
| Mean ELISA OD for uninfected ( | 0.373 (0.310–0.414) |
| Mean ELISA OD for infected ( | 0.473 (0.392–0.591) |
| Shape ELISA OD for uninfected ( | 11.117 (6.215–28.706) |
| Shape ELISA OD for infected ( | 4.876 (2.177–8.605) |
| WB: Sensitivity ( | 47.4 (23.6–72.1) |
| WB: Specificity (1 – | 50.0 (32.1–67.4) |
| Necropsy: Sensitivity ( | 79.9 (39.6–99.4) |
BCI = Bayesian Credible Interval; CE = Cystic echinococcosis; WB = Western blot; ELISA = Enzyme-linked immunosorbent assay; OD = optical density.
Fig. 1Receiver Operating Characteristic (ROC) curve analysis of ELISA optical density (OD) cut-off thresholds for individual sheep diagnosis.
The solid grey line represents, for the 79 thresholds investigated, the mean Sensitivity vs. 1 – Specificity values, and the dashed red lines encompass the 95% quantiles (grey shaded area). The diagonal black line represents random classification. The optimal ELISA threshold was identified as 0.378 (with the black circles indicating the distribution of diagnostic performance). At this cut-off threshold, the average sensitivity was estimated at 55% (95%BCI: 46%–68%) and the average specificity at 67% (95%BCI: 63%–92%). (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
Fig. 2Probability of correctly classifying CE flock status when varying CE prevalence and sample size.
Proportion of repeats (out of 100) yielding a correct flock-level diagnosis (i.e. positive if prevalence is above zero, or negative if equal to zero), across simulated sample sizes of 1 to 100 and CE prevalence values of 0% to 20%, for an ELISA optical density (OD) cut-off threshold of 0.496. A positive status at the flock level is indicated by ≥2 positive individual results within the hypothetical flock. The colour scale ranges from dark red (probability of correct classification equal to 0.0) to pale yellow (probability equal to 1.0). (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
Sample size estimates and probabilities of correct CE classification when CE is present from the simulations of hypothetical flocks for different values of the ELISA OD cut-off threshold.
| Cut-off threshold | Mean optimal sample size a | Proportion of correct disease classification b |
|---|---|---|
| 0.240 | 2 | 0.754 |
| 0.301 | 3 | 0.734 |
| 0.356 | 3 | 0.462 |
| 0.434 | 10 | 0.751 |
| 0.450 | 9 | 0.664 |
| 0.468 | 10 | 0.629 |
| 0.496 | 18 | 0.802 |
| 0.545 | 23 | 0.714 |
| 0.603 | 38 | 0.735 |
CE = Cystic echinococcosis.
a = Mean value of optimal sample sizes (1−100) across prevalence values (1%–20%).
b = Mean probability of correctly classifying a flock as positive across prevalence values 1%–20% (sensitivity) for the mean optimal sample size identified in previous column.
The ELISA OD threshold cut-off value with the greatest probability of correct CE classification is 0.496.