Literature DB >> 34932158

Genome-based reclassification of Evansella polygoni as a later heterotypic synonym of Evansella clarkii and transfer of Bacillus shivajii and Bacillus tamaricis to the genus Evansella as Evansella shivajii comb. nov. and Evansella tamaricis comb. nov.

Manik Prabhu Narsing Rao1, Min Xiao1, Dingqi Liu2, Rong Tang3, Guo-Hong Liu4, Wen-Jun Li5,6.   

Abstract

In the present study, the taxonomic positions of Evansella polygoni, Evansella clarkii, Bacillus shivajii and Bacillus tamaricis were evaluated using phylogenetic and genome-based comparisons. In phylogenetic (based on 16S rRNA sequencing) and phylogenomic (based on concatenation of protein-marker genes) trees, Bacillus shivajii and Bacillus tamaricis were placed between genera Evansella and Alteribacter. The amino acid identity (AAI) values suggested that Bacillus shivajii and Bacillus tamaricis were members of the genus Evansella. The average nucleotide identity (ANI) value between Evansella polygoni and Evansella clarkii was higher than the threshold values for bacterial species delineation, indicating that they belong to the same species. Based on the results, we propose to reclassify Evansella polygoni as a later heterotypic synonym of Evansella clarkii and transfer Bacillus shivajii and Bacillus tamaricis to the genus Evansella as Evansella shivajii comb. nov. and Evansella tamaricis comb. nov.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Bacillus shivajii; Bacillus tamaricis; Evansella clarkii; Evansella polygoni; Reclassification

Mesh:

Substances:

Year:  2021        PMID: 34932158     DOI: 10.1007/s00203-021-02720-w

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  23 in total

1.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

2.  Uncultivated microbes in need of their own taxonomy.

Authors:  Konstantinos T Konstantinidis; Ramon Rosselló-Móra; Rudolf Amann
Journal:  ISME J       Date:  2017-07-21       Impact factor: 10.302

3.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

4.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

5.  Evolutionary trees from DNA sequences: a maximum likelihood approach.

Authors:  J Felsenstein
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

6.  The effect of coumarin derivatives on the immunological system of man.

Authors:  B Berkarda; H Bouffard-Eyüboğlu; U Derman
Journal:  Agents Actions       Date:  1983-02

7.  Bacillus polygoni sp. nov., a moderately halophilic, non-motile obligate alkaliphile isolated from indigo balls.

Authors:  Kenichi Aino; Kikue Hirota; Toshihide Matsuno; Naoki Morita; Yoshinobu Nodasaka; Taketomo Fujiwara; Hidetoshi Matsuyama; Kazuaki Yoshimune; Isao Yumoto
Journal:  Int J Syst Evol Microbiol       Date:  2008-01       Impact factor: 2.747

8.  Robust demarcation of 17 distinct Bacillus species clades, proposed as novel Bacillaceae genera, by phylogenomics and comparative genomic analyses: description of Robertmurraya kyonggiensis sp. nov. and proposal for an emended genus Bacillus limiting it only to the members of the Subtilis and Cereus clades of species.

Authors:  Radhey S Gupta; Sudip Patel; Navneet Saini; Shu Chen
Journal:  Int J Syst Evol Microbiol       Date:  2020-10-27       Impact factor: 2.747

9.  Bacillus shivajii sp. nov., isolated from a water sample of Sambhar salt lake, India.

Authors:  Shekhar Kumar; Harjodh Singh; Manpreet Kaur; Lakhwinder Kaur; Naga Radha Srinivas Tanuku; Anil Kumar Pinnaka
Journal:  Int J Syst Evol Microbiol       Date:  2018-09-12       Impact factor: 2.747

10.  Anvi'o: an advanced analysis and visualization platform for 'omics data.

Authors:  A Murat Eren; Özcan C Esen; Christopher Quince; Joseph H Vineis; Hilary G Morrison; Mitchell L Sogin; Tom O Delmont
Journal:  PeerJ       Date:  2015-10-08       Impact factor: 2.984

View more
  1 in total

1.  Evansella halocellulosilytica sp. nov., an alkali-halotolerant and cellulose-dissolving bacterium isolated from bauxite residue.

Authors:  Guo-Hong Liu; Manik Prabhu Narsing Rao; Qian-Qian Chen; Jian-Mei Che; Huai Shi; Bo Liu; Wen-Jun Li
Journal:  Extremophiles       Date:  2022-06-04       Impact factor: 2.395

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.