Literature DB >> 34918241

An Update on "Reverse Vaccinology": The Pathway from Genomes and Epitope Predictions to Tailored, Recombinant Vaccines.

Marcin Michalik1, Bardya Djahanschiri2, Jack C Leo3, Dirk Linke4.   

Abstract

In this chapter, we review the computational approaches that have led to a new generation of vaccines in recent years. There are many alternative routes to develop vaccines based on the concept of reverse vaccinology. They all follow the same basic principles-mining available genome and proteome information for antigen candidates, and recombinantly expressing them for vaccine production. Some of the same principles have been used successfully for cancer therapy approaches. In this review, we focus on infectious diseases, describing the general workflow from bioinformatic predictions of antigens and epitopes down to examples where such predictions have been used successfully for vaccine development.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Core genome; Epitope prediction; Peptide epitopes; Reverse vaccinology; Surface proteins; Vaccine design

Mesh:

Substances:

Year:  2022        PMID: 34918241     DOI: 10.1007/978-1-0716-1892-9_4

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  99 in total

1.  MRI of post-traumatic lenticular dislocation.

Authors:  C Neal; J R Jinkins
Journal:  Neuroradiology       Date:  1991       Impact factor: 2.804

Review 2.  What Are the Most Powerful Immunogen Design Vaccine Strategies? Reverse Vaccinology 2.0 Shows Great Promise.

Authors:  Dennis R Burton
Journal:  Cold Spring Harb Perspect Biol       Date:  2017-11-01       Impact factor: 10.005

Review 3.  Vaccinology in the genome era.

Authors:  C Daniela Rinaudo; John L Telford; Rino Rappuoli; Kate L Seib
Journal:  J Clin Invest       Date:  2009-09       Impact factor: 14.808

4.  MHCPEP, a database of MHC-binding peptides: update 1997.

Authors:  V Brusic; G Rudy; L C Harrison
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

Review 5.  Developing vaccines in the era of genomics: a decade of reverse vaccinology.

Authors:  K L Seib; X Zhao; R Rappuoli
Journal:  Clin Microbiol Infect       Date:  2012-08-06       Impact factor: 8.067

6.  The cost of research diets.

Authors:  J C King; D H Calloway
Journal:  J Am Diet Assoc       Date:  1969-10

7.  Vaxign: the first web-based vaccine design program for reverse vaccinology and applications for vaccine development.

Authors:  Yongqun He; Zuoshuang Xiang; Harry L T Mobley
Journal:  J Biomed Biotechnol       Date:  2010-07-04

8.  NERVE: new enhanced reverse vaccinology environment.

Authors:  Sandro Vivona; Filippo Bernante; Francesco Filippini
Journal:  BMC Biotechnol       Date:  2006-07-18       Impact factor: 2.563

Review 9.  Comparison of Open-Source Reverse Vaccinology Programs for Bacterial Vaccine Antigen Discovery.

Authors:  Mattia Dalsass; Alessandro Brozzi; Duccio Medini; Rino Rappuoli
Journal:  Front Immunol       Date:  2019-02-14       Impact factor: 7.561

10.  Jenner-predict server: prediction of protein vaccine candidates (PVCs) in bacteria based on host-pathogen interactions.

Authors:  Varun Jaiswal; Sree Krishna Chanumolu; Ankit Gupta; Rajinder S Chauhan; Chittaranjan Rout
Journal:  BMC Bioinformatics       Date:  2013-07-01       Impact factor: 3.169

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  1 in total

1.  Design of a Multi-Epitopes Based Chimeric Vaccine against Enterobacter cloacae Using Pan-Genome and Reverse Vaccinology Approaches.

Authors:  Wafa Abdullah I Al-Megrin; Alaa Karkashan; Abdullah M Alnuqaydan; Faris F Aba Alkhayl; Faris Alrumaihi; Ahmad Almatroudi; Khaled S Allemailem
Journal:  Vaccines (Basel)       Date:  2022-06-01
  1 in total

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