Literature DB >> 19729849

Vaccinology in the genome era.

C Daniela Rinaudo1, John L Telford, Rino Rappuoli, Kate L Seib.   

Abstract

Vaccination has played a significant role in controlling and eliminating life-threatening infectious diseases throughout the world, and yet currently licensed vaccines represent only the tip of the iceberg in terms of controlling human pathogens. However, as we discuss in this Review, the arrival of the genome era has revolutionized vaccine development and catalyzed a shift from conventional culture-based approaches to genome-based vaccinology. The availability of complete bacterial genomes has led to the development and application of high-throughput analyses that enable rapid targeted identification of novel vaccine antigens. Furthermore, structural vaccinology is emerging as a powerful tool for the rational design or modification of vaccine antigens to improve their immunogenicity and safety.

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Year:  2009        PMID: 19729849      PMCID: PMC2735939          DOI: 10.1172/JCI38330

Source DB:  PubMed          Journal:  J Clin Invest        ISSN: 0021-9738            Impact factor:   14.808


  117 in total

Review 1.  The pan-genome: towards a knowledge-based discovery of novel targets for vaccines and antibacterials.

Authors:  Alessandro Muzzi; Vega Masignani; Rino Rappuoli
Journal:  Drug Discov Today       Date:  2007-05-07       Impact factor: 7.851

2.  Streptococcus pneumoniae pilus subunits protect mice against lethal challenge.

Authors:  Claudia Gianfaldoni; Stefano Censini; Markus Hilleringmann; Monica Moschioni; Claudia Facciotti; Werner Pansegrau; Vega Masignani; Antonello Covacci; Rino Rappuoli; Michèle Anne Barocchi; Paolo Ruggiero
Journal:  Infect Immun       Date:  2006-12-04       Impact factor: 3.441

3.  Identification of in vivo-expressed immunogenic proteins by serological proteome analysis of the Bacillus anthracis secretome.

Authors:  Theodor Chitlaru; Orit Gat; Haim Grosfeld; Itzhak Inbar; Yael Gozlan; Avigdor Shafferman
Journal:  Infect Immun       Date:  2007-03-12       Impact factor: 3.441

4.  HLA supertypes and immune responses to measles-mumps-rubella viral vaccine: findings and implications for vaccine design.

Authors:  Inna G Ovsyannikova; Robert M Jacobson; Robert A Vierkant; V Shane Pankratz; Gregory A Poland
Journal:  Vaccine       Date:  2007-01-19       Impact factor: 3.641

5.  Immunodominant Francisella tularensis antigens identified using proteome microarray.

Authors:  Jim E Eyles; Berkay Unal; Margaret Gill Hartley; Sarah L Newstead; Helen Flick-Smith; Joann L Prior; Petra C F Oyston; Arlo Randall; Yunxiang Mu; Siddiqua Hirst; Douglas M Molina; D Huw Davies; Tim Milne; Kate F Griffin; Pierre Baldi; Rick W Titball; Philip L Felgner
Journal:  Proteomics       Date:  2007-06       Impact factor: 3.984

6.  From protein microarrays to diagnostic antigen discovery: a study of the pathogen Francisella tularensis.

Authors:  Suman Sundaresh; Arlo Randall; Berkay Unal; Jeannine M Petersen; John T Belisle; M Gill Hartley; Melanie Duffield; Richard W Titball; D Huw Davies; Philip L Felgner; Pierre Baldi
Journal:  Bioinformatics       Date:  2007-07-01       Impact factor: 6.937

Review 7.  Signature-tagged mutagenesis: barcoding mutants for genome-wide screens.

Authors:  Piotr Mazurkiewicz; Christoph M Tang; Charles Boone; David W Holden
Journal:  Nat Rev Genet       Date:  2006-12       Impact factor: 53.242

8.  Structural definition of a conserved neutralization epitope on HIV-1 gp120.

Authors:  Tongqing Zhou; Ling Xu; Barna Dey; Ann J Hessell; Donald Van Ryk; Shi-Hua Xiang; Xinzhen Yang; Mei-Yun Zhang; Michael B Zwick; James Arthos; Dennis R Burton; Dimiter S Dimitrov; Joseph Sodroski; Richard Wyatt; Gary J Nabel; Peter D Kwong
Journal:  Nature       Date:  2007-02-15       Impact factor: 49.962

Review 9.  Structural genomics and drug discovery.

Authors:  K Lundstrom
Journal:  J Cell Mol Med       Date:  2007 Mar-Apr       Impact factor: 5.310

Review 10.  Structure and function of the HIV envelope glycoprotein as entry mediator, vaccine immunogen, and target for inhibitors.

Authors:  Ponraj Prabakaran; Antony S Dimitrov; Timothy R Fouts; Dimiter S Dimitrov
Journal:  Adv Pharmacol       Date:  2007
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  52 in total

1.  Scaffolding to build a rational vaccine design strategy.

Authors:  Dennis R Burton
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-11       Impact factor: 11.205

2.  Sex difference in immune response to vaccination: A participant-level meta-analysis of randomized trials of IMVAMUNE smallpox vaccine.

Authors:  Jesse D Troy; Heather R Hill; Marian G Ewell; Sharon E Frey
Journal:  Vaccine       Date:  2015-08-28       Impact factor: 3.641

3.  Tales from the gene pool: a genomic view of infectious disease.

Authors:  Karen Honey
Journal:  J Clin Invest       Date:  2009-09-01       Impact factor: 14.808

Review 4.  A decade of molecular pathogenomic analysis of group A Streptococcus.

Authors:  James M Musser; Samuel A Shelburne
Journal:  J Clin Invest       Date:  2009-09       Impact factor: 14.808

5.  Transcriptional modulation of enterotoxigenic Escherichia coli virulence genes in response to epithelial cell interactions.

Authors:  Rita Kansal; David A Rasko; Jason W Sahl; George P Munson; Koushik Roy; Qingwei Luo; Alaullah Sheikh; Kurt J Kuhne; James M Fleckenstein
Journal:  Infect Immun       Date:  2012-10-31       Impact factor: 3.441

6.  Vaccines, reverse vaccinology, and bacterial pathogenesis.

Authors:  Isabel Delany; Rino Rappuoli; Kate L Seib
Journal:  Cold Spring Harb Perspect Med       Date:  2013-05-01       Impact factor: 6.915

Review 7.  The genetic basis for interindividual immune response variation to measles vaccine: new understanding and new vaccine approaches.

Authors:  Iana H Haralambieva; Inna G Ovsyannikova; V Shane Pankratz; Richard B Kennedy; Robert M Jacobson; Gregory A Poland
Journal:  Expert Rev Vaccines       Date:  2013-01       Impact factor: 5.217

Review 8.  Group B Streptococcus vaccine: state of the art.

Authors:  Annalisa Nuccitelli; C Daniela Rinaudo; Domenico Maione
Journal:  Ther Adv Vaccines       Date:  2015-05

9.  T-cell epitope prediction and immune complex simulation using molecular dynamics: state of the art and persisting challenges.

Authors:  Matthew N Davies; Darren R Flower; Kanchan Phadwal; Isabel K Macdonald; Peter V Coveney; Shunzhou Wan
Journal:  Immunome Res       Date:  2010-11-03

Review 10.  The key role of genomics in modern vaccine and drug design for emerging infectious diseases.

Authors:  Kate L Seib; Gordon Dougan; Rino Rappuoli
Journal:  PLoS Genet       Date:  2009-10-26       Impact factor: 5.917

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