Literature DB >> 34885155

Performance Evaluation for Repair of HSGc-C5 Carcinoma Cell Using Geant4-DNA.

Dousatsu Sakata1, Masao Suzuki2, Ryoichi Hirayama2, Yasushi Abe1, Masayuki Muramatsu1, Shinji Sato1, Oleg Belov3,4, Ioanna Kyriakou5, Dimitris Emfietzoglou5, Susanna Guatelli6, Sebastien Incerti7, Taku Inaniwa1.   

Abstract

Track-structure Monte Carlo simulations are useful tools to evaluate initial DNA damage induced by irradiation. In the previous study, we have developed a Gean4-DNA-based application to estimate the cell surviving fraction of V79 cells after irradiation, bridging the gap between the initial DNA damage and the DNA rejoining kinetics by means of the two-lesion kinetics (TLK) model. However, since the DNA repair performance depends on cell line, the same model parameters cannot be used for different cell lines. Thus, we extended the Geant4-DNA application with a TLK model for the evaluation of DNA damage repair performance in HSGc-C5 carcinoma cells which are typically used for evaluating proton/carbon radiation treatment effects. For this evaluation, we also performed experimental measurements for cell surviving fractions and DNA rejoining kinetics of the HSGc-C5 cells irradiated by 70 MeV protons at the cyclotron facility at the National Institutes for Quantum and Radiological Science and Technology (QST). Concerning fast- and slow-DNA rejoining, the TLK model parameters were adequately optimized with the simulated initial DNA damage. The optimized DNA rejoining speeds were reasonably agreed with the experimental DNA rejoining speeds. Using the optimized TLK model, the Geant4-DNA simulation is now able to predict cell survival and DNA-rejoining kinetics for HSGc-C5 cells.

Entities:  

Keywords:  DNA repair; Geant4-DNA; cell surviving fraction

Year:  2021        PMID: 34885155      PMCID: PMC8656964          DOI: 10.3390/cancers13236046

Source DB:  PubMed          Journal:  Cancers (Basel)        ISSN: 2072-6694            Impact factor:   6.639


  52 in total

1.  Computational approach for determining the spectrum of DNA damage induced by ionizing radiation.

Authors:  H Nikjoo; P O'Neill; W E Wilson; D T Goodhead
Journal:  Radiat Res       Date:  2001-11       Impact factor: 2.841

2.  Relative biological effectiveness of the 235 MeV proton beams at the National Cancer Center Hospital East.

Authors:  K Ando; Y Furusawa; M Suzuki; K Nojima; H Majima; S Koike; M Aoki; W Shimizu; Y Futami; T Ogino; S Murayama; H Ikeda
Journal:  J Radiat Res       Date:  2001-03       Impact factor: 2.724

3.  Inactivation of aerobic and hypoxic cells from three different cell lines by accelerated (3)He-, (12)C- and (20)Ne-ion beams.

Authors:  Y Furusawa; K Fukutsu; M Aoki; H Itsukaichi; K Eguchi-Kasai; H Ohara; F Yatagai; T Kanai; K Ando
Journal:  Radiat Res       Date:  2000-11       Impact factor: 2.841

Review 4.  Track structures, DNA targets and radiation effects in the biophysical Monte Carlo simulation code PARTRAC.

Authors:  Werner Friedland; Michael Dingfelder; Pavel Kundrát; Peter Jacob
Journal:  Mutat Res       Date:  2011-01-31       Impact factor: 2.433

5.  Computational modelling of low-energy electron-induced DNA damage by early physical and chemical events.

Authors:  H Nikjoo; P O'Neill; D T Goodhead; M Terrissol
Journal:  Int J Radiat Biol       Date:  1997-05       Impact factor: 2.694

6.  IDDRRA: A novel platform, based on Geant4-DNA to quantify DNA damage by ionizing radiation.

Authors:  Konstantinos P Chatzipapas; Panagiotis Papadimitroulas; George Loudos; Niko Papanikolaou; George C Kagadis
Journal:  Med Phys       Date:  2021-03-30       Impact factor: 4.071

7.  Geant4-DNA example applications for track structure simulations in liquid water: A report from the Geant4-DNA Project.

Authors:  S Incerti; I Kyriakou; M A Bernal; M C Bordage; Z Francis; S Guatelli; V Ivanchenko; M Karamitros; N Lampe; S B Lee; S Meylan; C H Min; W G Shin; P Nieminen; D Sakata; N Tang; C Villagrasa; H N Tran; J M C Brown
Journal:  Med Phys       Date:  2018-06-14       Impact factor: 4.071

8.  Lethal and mutagenic bystander effects in human fibroblast cell cultures subjected to low-energy-carbon ions.

Authors:  Masao Suzuki; Nakahiro Yasuda; Hisashi Kitamura
Journal:  Int J Radiat Biol       Date:  2019-11-07       Impact factor: 2.694

9.  Technical Note: Improvements in geant4 energy-loss model and the effect on low-energy electron transport in liquid water.

Authors:  I Kyriakou; S Incerti; Z Francis
Journal:  Med Phys       Date:  2015-07       Impact factor: 4.071

Review 10.  Cancer and radiation therapy: current advances and future directions.

Authors:  Rajamanickam Baskar; Kuo Ann Lee; Richard Yeo; Kheng-Wei Yeoh
Journal:  Int J Med Sci       Date:  2012-02-27       Impact factor: 3.738

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