| Literature DB >> 34880346 |
Finn Jelke1,2, Giulia Mirizzi1,2, Felix Kleine Borgmann2,3,4, Andreas Husch5, Rédouane Slimani3, Gilbert Georg Klamminger2,4, Karoline Klein2, Laurent Mombaerts5, Jean-Jacques Gérardy4, Michel Mittelbronn3,4, Frank Hertel6,7,8.
Abstract
Meningiomas are among the most frequent tumors of the central nervous system. For a total resection, shown to decrease recurrences, it is paramount to reliably discriminate tumor tissue from normal dura mater intraoperatively. Raman spectroscopy (RS) is a non-destructive, label-free method for vibrational analysis of biochemical molecules. On the microscopic level, RS was already used to differentiate meningioma from dura mater. In this study we test its suitability for intraoperative macroscopic meningioma diagnostics. RS is applied to surgical specimen of intracranial meningiomas. The main purpose is the differentiation of tumor from normal dura mater, in order to potentially accelerate the diagnostic workflow. The collected meningioma and dura mater samples (n = 223 tissue samples from a total of 59 patients) are analyzed under untreated conditions using a new partially robotized RS acquisition system. Spectra (n = 1273) are combined with the according histopathological analysis for each sample. Based on this, a classifier is trained via machine learning. Our trained classifier separates meningioma and dura mater with a sensitivity of 96.06 [Formula: see text] 0.03% and a specificity of 95.44 [Formula: see text] 0.02% for internal fivefold cross validation and 100% and 93.97% if validated with an external test set. RS is an efficient method to discriminate meningioma from healthy dura mater in fresh tissue samples without additional processing or histopathological imaging. It is a quick and reliable complementary diagnostic tool to the neuropathological workflow and has potential for guided surgery. RS offers a safe way to examine unfixed surgical specimens in a perioperative setting.Entities:
Mesh:
Year: 2021 PMID: 34880346 PMCID: PMC8654829 DOI: 10.1038/s41598-021-02977-7
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1(A) Spectroscopic data acquisition and visualization system with robotized measuring spot navigation (Solais, Synaptive, Toronto, Canada). Upper left: Computer screen with the spectral curves on the left side and the white-light image on the right side. Lower left: Shows the robotized measurement chamber. (B) Flow chart of data flow.
Data overview.
| Meningioma subtype | Patients | Patient’s (n; %) | Measuring points (n; %) | ||
|---|---|---|---|---|---|
| Training set | Validation set | Training set | Validation set | ||
| Transitional meningioma | 13 | 10 (76.9%) | 3 (23.1%) | 171 (74.7%) | 58 (25.3%) |
| Meningiothelial meningioma | 19 | 15 (78.9%) | 4 (21.1%) | 197 (78.5%) | 54 (21.5%) |
| Atypical meningioma | 4 | 4 (100%) | 0 | 62 (100%) | 0 |
| Fibrous meningioma | 6 | 6 (100%) | 0 | 69 (100%) | 0 |
| Meningioma, not otherwise specified | 2 | 2 (100%) | 0 | 20 (100%) | 0 |
| Secretory meningioma | 1 | 1 (100%) | 0 | 14 (100%) | 0 |
| Subtotal “MGM” | |||||
| Healthy dura mater | 22 | 16 (72.7%) | 6 (27.3%) | 128 (79.0%) | 34 (21.0%0 |
| Tumor infiltration zone | Vide supra | Vide supra | 371 (80.7%) | 89 (19.3%) | |
| Verification sample | 1 | 1 | 108 | ||
| Total | 1268 | ||||
Three classes were defined: Unequivocal meningioma tumor tissue, healthy dura mater and tumor-infiltrated dura mater samples. The data was split up in a training and validation set. The percentages indicate the corresponding portions of samples and measuring points, subdivided in the different tissue types. Upper table part: Meningioma samples. Middle table part: Origin of the probed healthy dura mater samples. Lower table part: Meningioma-infiltrated dura mater samples. Closing line: Total numbers of patients, samples and measuring points. Notice that, the infiltration zone samples belong to patients that were already considered in the other classes. The kept out surgical-site-simulating verification sample was of atypical meningioma tissue origin and was used for the subsequent classifier mapping study.
Significant values are in bold.
Figure 5Histological verification of the meningioma-dura mater-classifier. (A) Visible Light Image (VLI) exported from the Solais with engraved measuring points and with a retraced frame. (B) Same VLI superimposed by a classifier heat map with color scale ranging from blue (not meningioma tissue) to yellow (meningioma). The greenish parts are the transition zones between the meningioma tissue and dura mater. (C) Superposition of 21 hematoxylin & eosin stained slides of the same sample with the tumor infiltration zoom-in window and measuring point specifications.
Figure 2(A) Individual average spectra and standard deviation of meningioma subtypes and of dura mater. Based on 47 measuring points of fibrous meningioma (MGM_fibr, dark-blue), 110 of meningothelial meningioma (MGM_men, orange), 159 of transitional meningioma (MGM_tra, yellow), 4 of secretory meningioma (MGM_sec, light blue), 56 of atypical meningioma (MGM_aty, purple), 25 of NOS-meningioma (MGM_NOS, green) and 117 of dura mater (Dura, scarlet). The spectra were z-score normalized. (B) to (D): Zoomed-in subintervals with focus on the spectral differences between the different meningioma subtypes and dura mater. (B) Subintervals from 830 to 1020 cm−1, (C) from 1200 to 1750 cm−1, (D) from 2820 to 2960 cm−1. The arrows in (A) to (D) represent the distinctive peaks between meningioma and dura mater, partially in line with the collagen spectrum[38].
Figure 3The tSNE-Cluster, based on the training data set, of meningioma subtypes and dura mater. The color-code is the same as in Fig. 2. (A), tSNE-Cluster of pathologically secured diagnoses of entire Raman spectrum of the chosen subclasses. (B) tSNE Cluster of pathologically approved diagnoses over high-wavenumber region (HWNR), interval 2800 cm−1 to 3000 cm−1. (C) tSNE Clusters based on collagen peaks.
Figure 4Top: Average spectra of all normalized (z-score normalized) meningioma and dura mater measurements; Bottom: Absolute difference spectrum of the previously plotted average spectra. Significant differences, calculated using Wilcoxon-Mann–Whitney-U test (Bonferroni-corrected p-value, resulting in p ≤ 0.01/1603 = 10 − 6), are highlighted in yellow.