Literature DB >> 34846200

Deep Learning Automated Background Phase Error Correction for Abdominopelvic 4D Flow MRI.

Sophie You1, Evan M Masutani1, Marcus T Alley1, Shreyas S Vasanawala1, Pam R Taub1, Joy Liau1, Anne C Roberts1, Albert Hsiao1.   

Abstract

Background Four-dimensional (4D) flow MRI has the potential to provide hemodynamic insights for a variety of abdominopelvic vascular diseases, but its clinical utility is currently impaired by background phase error, which can be challenging to correct. Purpose To assess the feasibility of using deep learning to automatically perform image-based background phase error correction in 4D flow MRI and to compare its effectiveness relative to manual image-based correction. Materials and Methods A convenience sample of 139 abdominopelvic 4D flow MRI acquisitions performed between January 2016 and July 2020 was retrospectively collected. Manual phase error correction was performed using dedicated imaging software and served as the reference standard. After reserving 40 examinations for testing, the remaining examinations were randomly divided into training (86% [85 of 99]) and validation (14% [14 of 99]) data sets to train a multichannel three-dimensional U-Net convolutional neural network. Flow measurements were obtained for the infrarenal aorta, common iliac arteries, common iliac veins, and inferior vena cava. Statistical analyses included Pearson correlation, Bland-Altman analysis, and F tests with Bonferroni correction. Results A total of 139 patients (mean age, 47 years ± 14 [standard deviation]; 108 women) were included. Inflow-outflow correlation improved after manual correction (ρ = 0.94, P < .001) compared with that before correction (ρ = 0.50, P < .001). Automated correction showed similar results (ρ = 0.91, P < .001) and demonstrated very strong correlation with manual correction (ρ = 0.98, P < .001). Both correction methods reduced inflow-outflow variance, improving mean difference from -0.14 L/min (95% limits of agreement: -1.61, 1.32) (uncorrected) to 0.05 L/min (95% limits of agreement: -0.32, 0.42) (manually corrected) and 0.05 L/min (95% limits of agreement: -0.38, 0.49) (automatically corrected). There was no significant difference in inflow-outflow variance between manual and automated correction methods (P = .10). Conclusion Deep learning automated phase error correction reduced inflow-outflow bias and variance of volumetric flow measurements in four-dimensional flow MRI, achieving results comparable with manual image-based phase error correction. © RSNA, 2021 See also the editorial by Roldán-Alzate and Grist in this issue.

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Year:  2021        PMID: 34846200      PMCID: PMC8893183          DOI: 10.1148/radiol.2021211270

Source DB:  PubMed          Journal:  Radiology        ISSN: 0033-8419            Impact factor:   11.105


  28 in total

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Authors:  Stefanie Winkelmann; Tobias Schaeffter; Thomas Koehler; Holger Eggers; Olaf Doessel
Journal:  IEEE Trans Med Imaging       Date:  2007-01       Impact factor: 10.048

Review 2.  Intraclass correlations: uses in assessing rater reliability.

Authors:  P E Shrout; J L Fleiss
Journal:  Psychol Bull       Date:  1979-03       Impact factor: 17.737

Review 3.  4D Flow MRI in Neuroradiology: Techniques and Applications.

Authors:  Vitor Mendes Pereira; Benedicte Delattre; Olivier Brina; Pierre Bouillot; Maria Isabel Vargas
Journal:  Top Magn Reson Imaging       Date:  2016-04

4.  Free-breathing pediatric MRI with nonrigid motion correction and acceleration.

Authors:  Joseph Y Cheng; Tao Zhang; Nichanan Ruangwattanapaisarn; Marcus T Alley; Martin Uecker; John M Pauly; Michael Lustig; Shreyas S Vasanawala
Journal:  J Magn Reson Imaging       Date:  2014-10-20       Impact factor: 4.813

5.  Superior Abdominal 4D Flow MRI Data Consistency with Adjusted Preprocessing Workflow and Noncontrast Acquisitions.

Authors:  Eric J Keller; Jeremy D Collins; Cynthia Rigsby; James C Carr; Michael Markl; Susanne Schnell
Journal:  Acad Radiol       Date:  2016-12-08       Impact factor: 3.173

6.  In-vivo validation of interpolation-based phase offset correction in cardiovascular magnetic resonance flow quantification: a multi-vendor, multi-center study.

Authors:  Mark B M Hofman; Manouk J A Rodenburg; Karin Markenroth Bloch; Beat Werner; Jos J M Westenberg; Emanuela R Valsangiacomo Buechel; Robin Nijveldt; Onno A Spruijt; Philip J Kilner; Albert C van Rossum; Peter D Gatehouse
Journal:  J Cardiovasc Magn Reson       Date:  2019-05-20       Impact factor: 5.364

7.  Data Quality and Optimal Background Correction Order of Respiratory-Gated k-Space Segmented Spoiled Gradient Echo (SGRE) and Echo Planar Imaging (EPI)-Based 4D Flow MRI.

Authors:  Federica Viola; Petter Dyverfeldt; Carl-Johan Carlhäll; Tino Ebbers
Journal:  J Magn Reson Imaging       Date:  2019-07-22       Impact factor: 4.813

8.  Flow measurement by cardiovascular magnetic resonance: a multi-centre multi-vendor study of background phase offset errors that can compromise the accuracy of derived regurgitant or shunt flow measurements.

Authors:  Peter D Gatehouse; Marijn P Rolf; Martin J Graves; Mark Bm Hofman; John Totman; Beat Werner; Rebecca A Quest; Yingmin Liu; Jochen von Spiczak; Matthias Dieringer; David N Firmin; Albert van Rossum; Massimo Lombardi; Juerg Schwitter; Jeanette Schulz-Menger; Philip J Kilner
Journal:  J Cardiovasc Magn Reson       Date:  2010-01-14       Impact factor: 5.364

Review 9.  4D flow cardiovascular magnetic resonance consensus statement.

Authors:  Petter Dyverfeldt; Malenka Bissell; Alex J Barker; Ann F Bolger; Carl-Johan Carlhäll; Tino Ebbers; Christopher J Francios; Alex Frydrychowicz; Julia Geiger; Daniel Giese; Michael D Hope; Philip J Kilner; Sebastian Kozerke; Saul Myerson; Stefan Neubauer; Oliver Wieben; Michael Markl
Journal:  J Cardiovasc Magn Reson       Date:  2015-08-10       Impact factor: 5.364

Review 10.  Contrast-enhanced ultrasound (CEUS) of the abdominal vasculature.

Authors:  Vasileios Rafailidis; Cheng Fang; Gibran T Yusuf; Dean Y Huang; Paul S Sidhu
Journal:  Abdom Radiol (NY)       Date:  2018-04
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  1 in total

Review 1.  4D Flow MRI in the portal venous system: imaging and analysis methods, and clinical applications.

Authors:  Ryota Hyodo; Yasuo Takehara; Shinji Naganawa
Journal:  Radiol Med       Date:  2022-09-19       Impact factor: 6.313

  1 in total

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