| Literature DB >> 34825985 |
Justin Eilertsen1,2, Santiago Schnell3,4,5.
Abstract
The quasi-steady-state approximation is widely used to develop simplified deterministic or stochastic models of enzyme catalyzed reactions. In deterministic models, the quasi-steady-state approximation can be mathematically justified from singular perturbation theory. For several closed enzymatic reactions, the homologous extension of the quasi-steady-state approximation to the stochastic regime, known as the stochastic quasi-steady-state approximation, has been shown to be accurate under the analogous conditions that permit the quasi-steady-state reduction in the deterministic counterpart. However, it was recently demonstrated that the extension of the stochastic quasi-steady-state approximation to an open Michaelis-Menten reaction mechanism is only valid under a condition that is far more restrictive than the qualifier that ensures the validity of its corresponding deterministic quasi-steady-state approximation. In this paper, we suggest a possible explanation for this discrepancy from the lens of geometric singular perturbation theory. In so doing, we illustrate a misconception in the application of the quasi-steady-state approximation: timescale separation does not imply singular perturbation.Entities:
Keywords: Fenichel theory; Langevin equation; Linear noise approximation; Michaelis–Menten reaction mechanism; Quasi-steady-state approximation; Singular perturbation; Slow scale linear noise approximation; Stochastic process; Tikhonov’s theorem
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Year: 2021 PMID: 34825985 PMCID: PMC8768927 DOI: 10.1007/s11538-021-00966-5
Source DB: PubMed Journal: Bull Math Biol ISSN: 0092-8240 Impact factor: 1.758