Literature DB >> 23214532

Rigorous elimination of fast stochastic variables from the linear noise approximation using projection operators.

Philipp Thomas1, Ramon Grima, Arthur V Straube.   

Abstract

The linear noise approximation (LNA) offers a simple means by which one can study intrinsic noise in monostable biochemical networks. Using simple physical arguments, we have recently introduced the slow-scale LNA (ssLNA), which is a reduced version of the LNA under conditions of timescale separation. In this paper we present the first rigorous derivation of the ssLNA using the projection operator technique and show that the ssLNA follows uniquely from the standard LNA under the same conditions of timescale separation as those required for the deterministic quasi-steady-state approximation. We also show that the large molecule number limit of several common stochastic model reduction techniques under timescale separation conditions constitutes a special case of the ssLNA.

Mesh:

Year:  2012        PMID: 23214532     DOI: 10.1103/PhysRevE.86.041110

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  9 in total

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6.  Reduction of multiscale stochastic biochemical reaction networks using exact moment derivation.

Authors:  Jae Kyoung Kim; Eduardo D Sontag
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7.  The slow-scale linear noise approximation: an accurate, reduced stochastic description of biochemical networks under timescale separation conditions.

Authors:  Philipp Thomas; Arthur V Straube; Ramon Grima
Journal:  BMC Syst Biol       Date:  2012-05-14

8.  Exact model reduction with delays: closed-form distributions and extensions to fully bi-directional monomolecular reactions.

Authors:  Andre Leier; Manuel Barrio; Tatiana T Marquez-Lago
Journal:  J R Soc Interface       Date:  2014-04-02       Impact factor: 4.118

9.  The relationship between stochastic and deterministic quasi-steady state approximations.

Authors:  Jae Kyoung Kim; Krešimir Josić; Matthew R Bennett
Journal:  BMC Syst Biol       Date:  2015-11-23
  9 in total

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