Literature DB >> 34764222

Anammox bacteria drive fixed nitrogen loss in hadal trench sediments.

Bo Thamdrup1, Clemens Schauberger2, Morten Larsen2, Blandine Trouche3, Lois Maignien3, Sophie Arnaud-Haond4, Frank Wenzhöfer2,5,6, Ronnie N Glud2,7,8.   

Abstract

Benthic N2 production by microbial denitrification and anammox is the largest sink for fixed nitrogen in the oceans. Most N2 production occurs on the continental shelves, where a high flux of reactive organic matter fuels the depletion of nitrate close to the sediment surface. By contrast, N2 production rates in abyssal sediments are low due to low inputs of reactive organics, and nitrogen transformations are dominated by aerobic nitrification and the release of nitrate to the bottom water. Here, we demonstrate that this trend is reversed in the deepest parts of the oceans, the hadal trenches, where focusing of reactive organic matter enhances benthic microbial activity. Thus, at ∼8-km depth in the Atacama Trench, underlying productive surface waters, nitrate is depleted within a few centimeters of the sediment surface, N2 production rates reach those reported from some continental margin sites, and fixed nitrogen loss is mainly conveyed by anammox bacteria. These bacteria are closely related to those known from shallow oxygen minimum zone waters, and comparison of activities measured in the laboratory and in situ suggest they are piezotolerant. Even the Kermadec Trench, underlying oligotrophic surface waters, exhibits substantial fixed N removal. Our results underline the role of hadal sediments as hot spots of deep-sea biological activity, revealing a fully functional benthic nitrogen cycle at high hydrostatic pressure and pointing to hadal sediments as a previously unexplored niche for anaerobic microbial ecology and diagenesis.

Entities:  

Keywords:  denitrification; hadal trenches; marine biogeochemistry; microbial ecology

Mesh:

Substances:

Year:  2021        PMID: 34764222      PMCID: PMC8609620          DOI: 10.1073/pnas.2104529118

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Molecular evidence for genus level diversity of bacteria capable of catalyzing anaerobic ammonium oxidation.

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Journal:  Syst Appl Microbiol       Date:  2000-04       Impact factor: 4.022

2.  Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation.

Authors:  Ivica Letunic; Peer Bork
Journal:  Bioinformatics       Date:  2006-10-18       Impact factor: 6.937

3.  Revising the nitrogen cycle in the Peruvian oxygen minimum zone.

Authors:  Phyllis Lam; Gaute Lavik; Marlene M Jensen; Jack van de Vossenberg; Markus Schmid; Dagmar Woebken; Dimitri Gutiérrez; Rudolf Amann; Mike S M Jetten; Marcel M M Kuypers
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-02       Impact factor: 11.205

4.  Towards a consistent classification scheme for geochemical environments, or, why we wish the term 'suboxic' would go away.

Authors:  D E Canfield; B Thamdrup
Journal:  Geobiology       Date:  2009-09       Impact factor: 4.407

5.  Stark contrast in denitrification and anammox across the deep Norwegian trench in the Skagerrak.

Authors:  Mark Trimmer; Pia Engström; Bo Thamdrup
Journal:  Appl Environ Microbiol       Date:  2013-09-20       Impact factor: 4.792

6.  Molecular mechanism of anaerobic ammonium oxidation.

Authors:  Boran Kartal; Wouter J Maalcke; Naomi M de Almeida; Irina Cirpus; Jolein Gloerich; Wim Geerts; Huub J M Op den Camp; Harry R Harhangi; Eva M Janssen-Megens; Kees-Jan Francoijs; Hendrik G Stunnenberg; Jan T Keltjens; Mike S M Jetten; Marc Strous
Journal:  Nature       Date:  2011-10-02       Impact factor: 49.962

7.  Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria.

Authors:  Sangita Ganesh; Anthony D Bertagnolli; Laura A Bristow; Cory C Padilla; Nigel Blackwood; Montserrat Aldunate; Annie Bourbonnais; Mark A Altabet; Rex R Malmstrom; Tanja Woyke; Osvaldo Ulloa; Konstantinos T Konstantinidis; Bo Thamdrup; Frank J Stewart
Journal:  ISME J       Date:  2018-07-10       Impact factor: 10.302

8.  Performance, accuracy, and Web server for evolutionary placement of short sequence reads under maximum likelihood.

Authors:  Simon A Berger; Denis Krompass; Alexandros Stamatakis
Journal:  Syst Biol       Date:  2011-03-23       Impact factor: 15.683

9.  Distinctive gene and protein characteristics of extremely piezophilic Colwellia.

Authors:  Logan M Peoples; Than S Kyaw; Juan A Ugalde; Kelli K Mullane; Roger A Chastain; A Aristides Yayanos; Masataka Kusube; Barbara A Methé; Douglas H Bartlett
Journal:  BMC Genomics       Date:  2020-10-06       Impact factor: 3.969

10.  Microbial community structure in hadal sediments: high similarity along trench axes and strong changes along redox gradients.

Authors:  Clemens Schauberger; Ronnie N Glud; Bela Hausmann; Blandine Trouche; Lois Maignien; Julie Poulain; Patrick Wincker; Sophie Arnaud-Haond; Frank Wenzhöfer; Bo Thamdrup
Journal:  ISME J       Date:  2021-06-08       Impact factor: 10.302

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  2 in total

Review 1.  The marine nitrogen cycle: new developments and global change.

Authors:  David A Hutchins; Douglas G Capone
Journal:  Nat Rev Microbiol       Date:  2022-02-07       Impact factor: 78.297

2.  Microbiomes in the Challenger Deep slope and bottom-axis sediments.

Authors:  Ying-Li Zhou; Paraskevi Mara; Guo-Jie Cui; Virginia P Edgcomb; Yong Wang
Journal:  Nat Commun       Date:  2022-03-21       Impact factor: 14.919

  2 in total

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