| Literature DB >> 34752669 |
Heming Wu1,2,3, Qingyan Huang1,2,3, Zhikang Yu1,2,3, Zhixiong Zhong1,2,3.
Abstract
BACKGROUND: Thalassemia is a group of inherited autosomal recessive hemolytic anemia disease caused by reduced or absent synthesis of globin chain/chains of hemoglobin. Only few studies showed the molecular characterization of α- and β-thalassemia in Meizhou city of China.Entities:
Keywords: Meizhou city; genotype distribution; thalassemia
Mesh:
Substances:
Year: 2021 PMID: 34752669 PMCID: PMC8649333 DOI: 10.1002/jcla.24105
Source DB: PubMed Journal: J Clin Lab Anal ISSN: 0887-8013 Impact factor: 2.352
Distribution genotypes and hematologic data of α‐thalassemia patients in Meizhou area
| Genotype | Cases | Constituent ratio (%) | MCV | MCH | ||||
|---|---|---|---|---|---|---|---|---|
| MCV < 82 fl | MCV normal | Proportion of MCV <82 fl (%) | MCH < 27 pg | MCH normal | Proportion of MCH < 27 pg (%) | |||
| ‐‐SEA/αα | 3039 | 62.78 | 2910 | 129 | 95.76 | 2898 | 141 | 95.36 |
| ‐α3.7/αα | 786 | 16.24 | 387 | 399 | 49.24 | 390 | 396 | 49.62 |
| ‐α4.2/αα | 310 | 6.40 | 179 | 131 | 57.74 | 168 | 142 | 54.19 |
| ‐‐SEA/‐α3.7 | 209 | 4.32 | 204 | 5 | 97.61 | 206 | 3 | 98.56 |
| αCSα/αα | 132 | 2.73 | 76 | 56 | 57.58 | 72 | 60 | 54.55 |
| αWSα/αα | 120 | 2.48 | 62 | 58 | 51.67 | 62 | 58 | 51.67 |
| ‐‐SEA/‐α4.2 | 82 | 1.69 | 79 | 3 | 96.34 | 79 | 3 | 96.34 |
| ‐‐SEA/αCSα | 66 | 1.36 | 49 | 17 | 74.24 | 63 | 3 | 95.45 |
| αQSα/αα | 37 | 0.76 | 33 | 4 | 89.19 | 35 | 2 | 94.59 |
| ‐‐SEA/αWSα | 17 | 0.35 | 15 | 2 | 88.24 | 14 | 3 | 82.35 |
| ‐α3.7/‐α3.7 | 12 | 0.25 | 12 | 100.00 | 12 | 100.00 | ||
| ‐α3.7/‐α4.2 | 11 | 0.23 | 11 | 100.00 | 11 | 100.00 | ||
| ‐‐SEA/αQSα | 5 | 0.10 | 5 | 100.00 | 5 | 100.00 | ||
| ‐α3.7/αCSα | 5 | 0.10 | 3 | 2 | 60.00 | 4 | 1 | 80.00 |
| ‐α3.7/αWSα | 4 | 0.08 | 4 | 100.00 | 2 | 2 | 50.00 | |
| ‐‐SEA/HKαα | 3 | 0.06 | 2 | 1 | 66.67 | 2 | 1 | 66.67 |
| αWSα/αWSα | 2 | 0.04 | 2 | 100.00 | 2 | 100.00 | ||
| ‐α4.2/αWSα | 1 | 0.02 | 1 | 100.00 | 1 | 100.00 | ||
| Total | 4841 | 100 | 4034 | 807 | 83.33 | 4026 | 815 | 83.16 |
Distribution genotypes and hematologic data of β‐thalassemia patients in Meizhou area
| Genotype | Cases | Constituent ratio (%) | MCV | MCH | ||||
|---|---|---|---|---|---|---|---|---|
| MCV < 82 fl | MCV normal | Proportion of MCV < 82 fl (%) | MCH < 27 pg | MCH normal | Proportion of MCH < 27 pg (%) | |||
| βIVS−II−654/βN | 898 | 40.14 | 865 | 33 | 96.33 | 859 | 39 | 95.66 |
| βCD41−42/βN | 743 | 33.21 | 714 | 29 | 96.10 | 704 | 39 | 94.75 |
| βCD17/βN | 206 | 9.21 | 195 | 11 | 94.66 | 194 | 12 | 94.17 |
| β−28/βN | 204 | 9.12 | 192 | 12 | 94.12 | 186 | 18 | 91.18 |
| βCD27−28/βN | 39 | 1.74 | 38 | 1 | 97.44 | 38 | 1 | 97.44 |
| βCD26/βN | 32 | 1.43 | 28 | 4 | 87.50 | 28 | 4 | 87.50 |
| βCD71−72/βN | 30 | 1.34 | 30 | 100.00 | 30 | 100.00 | ||
| βCap+40−43/βN | 21 | 0.94 | 10 | 11 | 47.62 | 11 | 10 | 52.38 |
| β−29/βN | 12 | 0.54 | 11 | 1 | 91.67 | 10 | 2 | 83.33 |
| βCD14−15/βN | 11 | 0.49 | 10 | 1 | 90.91 | 11 | 100.00 | |
| β−28/β−28 | 7 | 0.31 | 6 | 1 | 85.71 | 6 | 1 | 85.71 |
| βCD43/βN | 6 | 0.27 | 6 | 100.00 | 6 | 100.00 | ||
| βIVS−II−654/βIVS−II−654 | 6 | 0.27 | 3 | 3 | 50.00 | 3 | 3 | 50.00 |
| βCD41−42/βCD26 | 4 | 0.18 | 4 | 100.00 | 4 | 100.00 | ||
| βIVS−II−654/βCD26 | 3 | 0.13 | 2 | 1 | 66.67 | 3 | 100.00 | |
| β−28/βCD27−28 | 2 | 0.09 | 2 | 100.00 | 2 | 100.00 | ||
| βCD41−42/β−28 | 2 | 0.09 | 2 | 100.00 | 1 | 1 | 50.00 | |
| βCD41−42/βCD41−42 | 2 | 0.09 | 2 | 100.00 | 1 | 1 | 50.00 | |
| βIVS−I−1/βN | 1 | 0.04 | 1 | 100.00 | 1 | 100.00 | ||
| β−28/βCap+40−43 | 1 | 0.04 | 1 | 100.00 | 1 | 100.00 | ||
| βCD17/β−28 | 1 | 0.04 | 1 | 100.00 | 1 | 100.00 | ||
| βCD17/βCD26 | 1 | 0.04 | 1 | 100.00 | 1 | 100.00 | ||
| βCD41−42/βCap+40−43 | 1 | 0.04 | 1 | 100.00 | 1 | 100.00 | ||
| βCD41−42/βCD27−28 | 1 | 0.04 | 1 | 100.00 | 1 | 100.00 | ||
| βCD41−42/βIVS−II−654 | 1 | 0.04 | 1 | ‐ | 1 | ‐ | ||
| βIVS−I−5/βN | 1 | 0.04 | 1 | ‐ | 1 | ‐ | ||
| βIVS−II−654/β−28 | 1 | 0.04 | 1 | 100.00 | 1 | ‐ | ||
| Total | 2237 | 100 | 2127 | 110 | 95.08 | 2103 | 134 | 94.01 |
Distribution genotypes and hematologic data of composite α‐thalassemia and β‐thalassemia patients in Meizhou area
| Genotype | Cases | Constituent ratio (%) | MCV | MCH | ||||
|---|---|---|---|---|---|---|---|---|
| MCV < 82 fl | MCV normal | Proportion of MCV < 82 fl (%) | MCH < 27 pg | MCH normal | Proportion of MCH < 27 pg (%) | |||
| ‐‐SEA/αα, βIVS−II−654/βN | 46 | 18.85 | 43 | 3 | 93.48 | 41 | 5 | 89.13 |
| ‐‐SEA/αα, βCD41−42/βN | 36 | 14.75 | 35 | 1 | 97.22 | 34 | 2 | 94.44 |
| ‐‐SEA/αα, β−28/βN | 22 | 9.02 | 19 | 3 | 86.36 | 20 | 2 | 90.91 |
| ‐α3.7/αα, βIVS−II−654/βN | 21 | 8.61 | 19 | 2 | 90.48 | 19 | 2 | 90.48 |
| ‐α3.7/αα, βCD41−42/βN | 18 | 7.38 | 16 | 2 | 88.89 | 17 | 1 | 94.44 |
| ‐‐SEA/αα, βCD17/βN | 11 | 4.51 | 11 | 100.00 | 11 | 100.00 | ||
| ‐‐SEA/αα, βCD27−28/βN | 8 | 3.28 | 7 | 1 | 87.50 | 7 | 1 | 87.50 |
| ‐α4.2/αα, βCD41−42/βN | 8 | 3.28 | 7 | 1 | 87.50 | 7 | 1 | 87.50 |
| ‐‐SEA/αα, βCD26/βN | 6 | 2.46 | 6 | 100.00 | 6 | 100.00 | ||
| αCSα/αα, βIVS−II−654/βN | 6 | 2.46 | 6 | 100.00 | 6 | 100.00 | ||
| ‐α3.7/αα, β−28/βN | 5 | 2.05 | 5 | 100.00 | 5 | 100.00 | ||
| ‐α4.2/αα, βIVS−II−654/βN | 5 | 2.05 | 5 | 100.00 | 5 | 100.00 | ||
| αCSα/αα, βCD41−42/βN | 5 | 2.05 | 5 | 100.00 | 5 | 100.00 | ||
| ‐‐SEA/αα, βIVS−II−654/β−28 | 3 | 1.23 | 3 | 100.00 | 3 | 100.00 | ||
| ‐α3.7/αα, βCD26/βN | 3 | 1.23 | 1 | 2 | 33.33 | 1 | 2 | 33.33 |
| αWSα/αα, βCD17/βN | 3 | 1.23 | 3 | 100.00 | 3 | 100.00 | ||
| αWSα/αα, βCD41−42/βN | 3 | 1.23 | 3 | 100.00 | 3 | 100.00 | ||
| ‐‐SEA/‐α3.7, βCD41−42/βN | 2 | 0.82 | 2 | 100.00 | 2 | 100.00 | ||
| ‐‐SEA/‐α3.7, βIVS−II−654/βN | 2 | 0.82 | 2 | 100.00 | 2 | 100.00 | ||
| ‐α3.7/αα, βCD17/βN | 2 | 0.82 | 2 | 100.00 | 2 | 100.00 | ||
| ‐α4.2/αα, β−28/βN | 2 | 0.82 | 2 | 100.00 | 1 | 1 | 50.00 | |
| ‐α4.2/αα, βCD17/βN | 2 | 0.82 | 2 | 100.00 | 2 | 100.00 | ||
| ‐‐SEA/HKαα, βIVS−II−654/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐‐SEA/‐α3.7, βCap+40−43/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐‐SEA/‐α4.2, βIVS−II−654/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐‐SEA/αCSα, βCD17/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐‐SEA/αCSα, βCD41−42/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐‐SEA/αCSα, βIVS−II−654/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐‐SEA/αα, βIVS−II−654/βCD27−28 | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐‐SEA/αα, βCap+40−43/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐‐SEA/αα, βCD17/β−28 | 1 | 0.41 | 1 | 100.00 | 1 | 0.00 | ||
| ‐‐SEA/αα, βCD71−72/βN | 1 | 0.41 | 1 | 0.00 | 1 | 0.00 | ||
| ‐α3.7/αα, β−28/β−28 | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐α3.7/αα, βCap+40−43/βN | 1 | 0.41 | 1 | 0.00 | 1 | 0.00 | ||
| ‐α3.7/αα, βCD17/βCD27−28 | 1 | 0.41 | 1 | 100.00 | 1 | 0.00 | ||
| ‐α3.7/αα, βCD41−42/βIVS−II−654 | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐α3.7/αα, βCD71−72/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐α4.2/‐α4.2, βCD41−42/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐α4.2/αα, βCD71−72/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| ‐α4.2/αα, βCD26/βN | 1 | 0.41 | 1 | 100.00 | 1 | 0.00 | ||
| αCSα/αα, β−28/βN | 1 | 0.41 | 1 | 0.00 | 1 | 100.00 | ||
| αCSα/αα, βCD27−28/βN | 1 | 0.41 | 1 | 0.00 | 1 | 100.00 | ||
| αQSα/αα, βCD41−42/β−28 | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| αWSα/‐α3.7, βCD41−42/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| αWSα/αα, βCD27−28/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| αWSα/αα, βCD26/βN | 1 | 0.41 | 1 | 100.00 | 1 | 100.00 | ||
| αWSα/αα, βIVS−II−654/βN | 1 | 0.41 | 1 | 100.00 | 1 | 0.00 | ||
| Total | 244 | 100 | 225 | 19 | 92.21 | 221 | 23 | 90.57 |
Allele frequencies of α‐ and β‐thalassemia mutations in the Meizhou area
| Allele | Constituent ratio (%) | |
|---|---|---|
| α‐thalassemia | ||
| ‐‐SEA | 3567 | 64.69 |
| ‐α3.7 | 1099 | 19.93 |
| ‐α4.2 | 426 | 7.73 |
| αCSα | 219 | 3.97 |
| αWSα | 156 | 2.83 |
| αQSα | 43 | 0.78 |
| HKαα | 4 | 0.07 |
| Total | 5514 | 100 |
| β‐thalassemia | ||
| IVS‐II−654 (C>T) | 1004 | 39.79 |
| VCD41‐42 (‐TCTT) | 833 | 33.02 |
| −28 (A>G) | 262 | 10.38 |
| CD17 (A>T) | 229 | 9.08 |
| CD27‐28 (+C) | 54 | 2.14 |
| CD26 (G>A) | 51 | 2.02 |
| CD71‐72 (+A) | 33 | 1.31 |
| CAP +40–43 (‐AAAC) | 26 | 1.03 |
| −29 (A>G) | 12 | 0.48 |
| CD14‐15 (+G) | 11 | 0.44 |
| CD43 (G>T) | 6 | 0.24 |
| IVS‐I−1 | 1 | 0.04 |
| IVS‐I−5 | 1 | 0.04 |
| Total | 2523 | 100 |
Comparison of the allele constituent ratios of α‐ and β‐thalassemia common mutations in the populations of Meizhou, some regions of Guangdong province and some provinces of southern China
| Area | First | Second | Third | Fourth | Fifth | Others | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mutation | % | Mutation | % | Mutation | % | Mutation | % | Mutation | % | % | |
| α‐thalassemia | |||||||||||
| Our data | ‐‐SEA | 64.7 | ‐α3.7 | 19.9 | ‐α4.2 | 7.7 | αCSα | 4.0 | αWSα | 2.8 | 0.9 |
| Fujian province | ‐‐SEA | 66.1 | ‐α3.7 | 20.7 | ‐α4.2 | 7.2 | αQSα | 3.3 | αCSα | 1.4 | 1.3 |
| Guangdong province | ‐‐SEA | 51.5 | ‐α3.7 | 28.4 | ‐α4.2 | 9.5 | αWSα | 6.5 | αCSα | 2.6 | 1.5 |
| Guangxi province | ‐‐SEA | 45.5 | ‐α3.7 | 25.4 | ‐α4.2 | 11.3 | αCSα | 7.9 | αQSα | 5.6 | 4.3 |
| Chongqing area | ‐α3.7 | 53.6 | ‐‐SEA | 17.9 | ‐α4.2 | 8.9 | αQSα | 1.8 | ‐ | ‐ | ‐ |
| Yunnan province | ‐‐SEA | 59.2 | ‐α3.7 | 19.0 | αCSα | 15.5 | ‐α4.2 | 6.3 | ‐ | ‐ | ‐ |
| Jiangxi province | ‐‐SEA | 61.8 | ‐α3.7 | 41.9 | ‐α4.2 | 9.7 | αQSα | 1.4 | αCSα | 1.1 | ‐ |
| Shantou city | ‐‐SEA | 52.7 | ‐α3.7 | 30.9 | ‐α4.2 | 9.1 | αCSα | 3.6 | αQSα | 3.6 | ‐ |
| Chaozhou city | ‐‐SEA | 58.7 | ‐α3.7 | 22.0 | ‐α4.2 | 14.8 | αCSα | 3.1 | αQSα | 1.4 | ‐ |
| Shaoguan city | ‐‐SEA | 51.4 | ‐α3.7 | 41.0 | ‐α4.2 | 4.8 | αCSα | 2.9 | ‐ | ‐ | ‐ |
| Heyuan city | ‐‐SEA | 78.8 | ‐α3.7 | 13.5 | ‐α4.2 | 7.7 | ‐ | ‐ | ‐ | ‐ | ‐ |
| Zhuhai city | ‐‐SEA | 50.0 | ‐α3.7 | 29.7 | ‐α4.2 | 10.9 | αCSα | 2.9 | αQSα | 1.4 | 5.1 |
| Shenzhen city | ‐‐SEA | 75.7 | ‐α3.7 | 17.5 | ‐α4.2 | 5.6 | αCSα | 1.1 | ‐ | ‐ | ‐ |
| Shunde district, Foshan city | ‐‐SEA | 50.5 | ‐α3.7 | 44.1 | ‐α4.2 | 4.3 | αCSα | 1.1 | ‐ | ‐ | ‐ |
| Nanhai district, Foshan city | ‐‐SEA | 77.6 | ‐α3.7 | 15.0 | ‐α4.2 | 7.4 | ‐ | ‐ | ‐ | ‐ | ‐ |
| Meta‐analysis conducted by Lai et al. | ‐‐SEA | 51.0 | ‐α3.7 | 27.5 | ‐α4.2 | 9.5 | αWSα | 6.1 | αCSα | 4.3 | ‐ |
| β‐thalassemia | |||||||||||
| Our data | IVS‐II−654 (C>T) | 39.8 | CD41‐42 (‐TCTT) | 33.0 | −28 (A>G) | 10.4 | CD17 (A>T) | 9.1 | CD27‐28 (+C) | 2.1 | 5.6 |
| Fujian province | IVS‐II−654 (C>T) | 43.9 | CD41‐42 (‐TCTT) | 27.0 | CD17 (A>T) | 8.1 | CD71‐72 (+A) | 6.8 | CD26 (G>A) | 1.4 | 12.8 |
| Guangdong province | CD41‐42 (‐TCTT) | 39.2 | IVS‐II−654 (C>T) | 26.0 | CD71‐72 (+A) | 14.2 | CD17 (A>T) | 8.2 | CD26 (G>A) | 2.6 | 9.8 |
| Guangxi province | CD41‐42 (‐TCTT) | 42.3 | CD17 (A>T) | 28.1 | CD71‐72 (+A) | 7.7 | IVS‐II−654 (C>T) | 6.6 | −28 (A>G) | 6.4 | 8.9 |
| Chongqing area | CD41‐42 (‐TCTT) | 46.7 | IVS‐II−654 (C>T) | 20.0 | CD17 (A>T) | 11.1 | CD26 (G>A) | 11.1 | −29 (A>G) | 8.9 | 2.2 |
| Yunnan province | CD26 (G>A) | 30.5 | CD17 (A>T) | 20.8 | CD41‐42 (‐TCTT) | 17.5 | IVS‐II−654 (C>T) | 17.2 | −28 (A>G) | 6.9 | 7.1 |
| Jiangxi province | IVS‐II−654 (C>T) | 39.1 | CD41‐42 (‐TCTT) | 30.4 | −28 (A>G) | 18.3 | CD17 (A>T) | 4.3 | CD27‐28 (+C) | 4.3 | 3.6 |
| Shantou city | IVS‐II−654 (C>T) | 46.7 | CD41‐42 (‐TCTT) | 20.0 | −28 (A>G) | 13.3 | CD17 (A>T) | 13.3 | Cap +1 (A>C) | 6.7 | ‐ |
| Chaozhou city | IVS‐II−654 (C>T) | 36.8 | CD41‐42 (‐TCTT) | 34.2 | −28 (A>G) | 13.2 | CD26 (G>A) | 7.9 | CD17 (A>T) | 5.3 | 2.6 |
| Shaoguan city | CD41‐42 (‐TCTT) | 47.3 | IVS‐II−654 (C>T) | 16.4 | −28 (A>G) | 12.7 | CD43 (G>T) | 9.1 | CD71‐72 (+A) | 3.6 | 10.9 |
| Heyuan city | CD41‐42 (‐TCTT) | 47.9 | IVS‐II−654 (C>T) | 33.9 | CD14‐15 (+G) | 7.0 | −28 (A>G) | 5.6 | CD17 (A>T) | 2.8 | 2.8 |
| Zhuhai city | CD41‐42 (‐TCTT) | 41.0 | −28 (A>G) | 17.4 | IVS‐II−654 (C>T) | 17.0 | CD17 (A>T) | 9.0 | CD71‐72 (+A) | 4.7 | 10.9 |
| Shenzhen city | CD41‐42 (‐TCTT) | 41.3 | IVS‐II−654 (C>T) | 27.5 | −28 (A>G) | 13.8 | CD17 (A>T) | 8.8 | CD71‐72 (+A) | 2.5 | 6.3 |
| Shunde district, Foshan city | CD41‐42 (‐TCTT) | 39.9 | IVS‐II−654 (C>T) | 21.0 | CD17 (A>T) | 19.4 | −28 (A>G) | 12.9 | CD26 (G>A) | 5.0 | 1.8 |
| Nanhai district, Foshan city | CD41‐42 (‐TCTT) | 38.2 | IVS‐II−654 (C>T) | 22.8 | −28 (A>G) | 15.1 | CD17 (A>T) | 10.2 | CD43 (G>T) | 4.7 | 9.0 |
| Meta‐analysis conducted by Lai et al. | CD41‐42 (‐TCTT) | 38.7 | IVS‐II−654 (C>T) | 18.6 | CD17 (A>T) | 16.1 | −28 (A>G) | 10.9 | CD71‐72 (+A) | 3.5 | 12.2 |