| Literature DB >> 31793705 |
Heming Wu1,2,3,4, Qiuyan Zhu1,2,3,4, Hua Zhong1,2,3,4, Zhikang Yu1,2,3,4, Qunji Zhang1,2,3,4, Qingyan Huang1,2,3,4.
Abstract
OBJECTIVE: The aim of the study was to explore genotype distribution thalassemia and G6PD deficiency in Meizhou city, China.Entities:
Keywords: G6PD; Meizhou city; genotype distribution; southern China; thalassemia
Mesh:
Year: 2019 PMID: 31793705 PMCID: PMC7171329 DOI: 10.1002/jcla.23140
Source DB: PubMed Journal: J Clin Lab Anal ISSN: 0887-8013 Impact factor: 2.352
Figure 1The geographical position of the eight counties in Meizhou
The prevalence of α‐ and β‐thalassemia in different counties of Meizhou area
| Variable | Case number (n = 16 158) (percentage, %) | Total (n = 16 158) | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Xingning (n = 3146) | Wuhua (n = 3077) | Meixian (n = 2743) | Meijiang (n = 2098) | Fengshun (n = 1859) | Jiaoling (n = 1349) | Pingyuan (n = 966) | Dabu (n = 920) | ||
| α‐thalassemia | 693 (21.96) | 703 (22.85) | 615 (22.42) | 435 (20.73) | 411 (22.11) | 295 (21.87) | 230 (23.81) | 203 (22.07) | 3585 (22.19) |
| α‐thalassemia silent | 188 (5.98) | 174 (5.65) | 142 (5.18) | 95 (4.53) | 99 (5.33) | 84 (6.23) | 60 (6.21) | 46 (5.00) | 888 (5.50) |
| α‐thalassemia trait | 454 (14.43) | 458 (14.88) | 423 (15.42) | 316 (15.06) | 277 (14.90) | 199 (14.75) | 150 (15.53) | 139 (15.11) | 2416 (14.95) |
| HB H disease | 51 (1.62) | 71 (2.31) | 50 (1.82) | 24 (1.14) | 35 (1.88) | 12 (0.89) | 20 (2.07) | 18 (1.96) | 281 (1.74) |
| β‐thalassemia | 338 (10.74) | 336 (10.92) | 275 (10.03) | 218 (10.39) | 184 (9.80) | 144 (10.67) | 111(11.49) | 95 (10.33) | 1701 (10.53) |
| β‐thalassemia trait | 333 (10.58) | 330 (10.72) | 273 (9.95) | 214 (10.20) | 182 (9.79) | 142 (10.53) | 111 (11.49) | 93 (10,11) | 1678 (10.38) |
| β‐thalassemia major | 5 (0.16) | 6 (0.19) | 2 (0.07) | 4 (0.19) | 2 (0.11) | 2 (0.15) | 0 (0) | 2 (0.22) | 23 (0.14) |
| α‐compound β‐thalassemia | 40 (1.27) | 40 (1.30) | 29 (1.06) | 15 (0.71) | 20 (1.08) | 12 (0.89) | 7 (0.72) | 14 (1.52) | 177 (1.10) |
| Total | 1071 (34.04) | 1079 (35.07) | 919 (33.50) | 668 (31.84) | 615 (33.08) | 451 (33.43) | 348 (36.02) | 312 (33.91) | 5463 (33.81) |
The shaded cells show that there are statistically significant differences compared with other counties.
Manifests that compared with other counties, P < .05.
Allele frequencies of α‐ and β‐thalassemia in different counties of Meizhou area
| Mutant chromosomes | Allele number (percentage, %) | Total (n = 32 316) | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Xingning (n = 6292) | Wuhua (n = 6154) | Meixian (n = 5486) | Meijiang (n = 4196) | Fengshun (n = 3718) | Jiaoling (n = 2698) | Pingyuan (n = 1932) | Dabu (n = 1840) | ||
| α‐thalassemia | 790 (12.56) | 824 (13.39) | 693 (12.63) | 478 (11.39) | 473 (12.72) | 322 (11.93) | 253 (13.10) | 230 (12.50) | 4063 (12.57) |
| (‐‐SEA)deletion | 515 (8.18) | 521 (8.47) | 458 (8.34) | 329 (7.84) | 295 (7.93) | 202 (7.49) | 169 (8.75) | 157 (8.53) | 2646 (8.19) |
| (‐α3.7)deletion | 154 (2.45) | 169 (2.75) | 135 (2.46) | 82 (1.95) | 95 (2.56) | 57 (2.11) | 49 (2.53) | 33 (1.79) | 774 (2.40) |
| (‐α4.2)deletion | 67 (1.06) | 63 (1.02) | 49 (0.89) | 39 (0.93) | 33 (0.89) | 39 (1.45) | 22 (1.14) | 15 (0.82) | 327 (1.01) |
| αCSα(CD142,TAA → CAA) | 13 (0.21) | 31 (0.50) | 38 (0.69) | 18 (0.43) | 25 (0.67) | 13 (0.48) | 5 (0.26) | 18 (0.98) | 161 (0.50) |
| αWSα (CD122,CAC → CAG) | 38 (0.60) | 29 (0.47) | 10 (0.18) | 9 (0.21) | 15 (0.40) | 6 (0.22) | 8 (0.41) | 5 (0.27) | 120 (0.37) |
| αQSα (CD125,CTG → CCG) | 3 (0.05) | 11 (0.18) | 3 (0.05) | 1 (0.02) | 9 (0.24) | 5 (0.19) | 0 (0) | 2 (0.11) | 34 (0.11) |
| (‐αHK)deletion | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 1 (0.03) | 0 (0) | 0 (0) | 0 (0) | 1 (0.01) |
| β‐thalassemia | 382 (6.07) | 380 (6.17) | 305 (5.56) | 237 (5.65) | 201 (5.41) | 156 (5.78) | 119 (6.16) | 109 (5.92) | 1889 (5.85) |
| IVS‐II‐654(C → T) | 157 (2.50) | 144 (2.34) | 108 (1.97) | 97 (2.31) | 75 (2.02) | 75 (2.78) | 61 (3.16) | 46 (2.50) | 763 (2.36) |
| CD41‐42 (‐TCTT) | 103 (1.64) | 142 (2.31) | 109 (1.99) | 70 (1.67) | 85 (2.27) | 42 (1.56) | 32 (1.66) | 35 (1.90) | 618 (1.91) |
| ‐28 (A → G) | 54 (0.86) | 34 (0.55) | 28 (0.51) | 22 (0.52) | 14 (0.38) | 17 (0.63) | 17 (0.88) | 5 (0.27) | 191 (0.59) |
| CD17 (A → T) | 40 (0.64) | 43 (0.70) | 31 (0.57) | 20 (0.48) | 17 (0.46) | 8 (0.30) | 7 (0.36) | 10 (0.54) | 176 (0.54) |
| CD27‐28 (+C) | 10 (0.16) | 1 (0.02) | 6 (0.11) | 7 (0.17) | 0 (0) | 4 (0.15) | 2 (0.10) | 8 (0.43) | 38 (0.12) |
| CD26 (G → A) | 2 (0.03) | 1 (0.02) | 9 (0.16) | 10 (0.24) | 6 (0.16) | 8 (0.30) | 0 (0) | 2 (0.11) | 38 (0.12) |
| CD71‐72 (+A) | 8 (0.13) | 7 (0.11) | 4 (0.07) | 2 (0.05) | 1 (0.03) | 2 (0.07) | 0 (0) | 1 (0.05) | 25 (0.08) |
| Cap+40‐43 (‐AAAC) | 0 (0) | 3 (0.05) | 5 (0.09) | 6 (0.14) | 2 (0.05) | 0 (0) | 0 (0) | 2 (0.11) | 18 (0.06) |
| CD14‐15 (+G) | 2 (0.03) | 0 (0) | 1 (0.02) | 1 (0.02) | 1 (0.03) | 0 (0) | 0 (0) | 0 (0) | 5 (0.02) |
| ‐29 (A → G) | 5 (0.08) | 3 (0.05) | 2 (0.04) | 1 (0.02) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 11 (0.03) |
| CD43 (G → T) | 1 (0.02) | 2 (0.03) | 1 (0.02) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 4 (0.01) |
| IVS‐I‐1 | 0 (0) | 0 (0) | 1 (0.02) | 1 (0.02) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 2 (0.01) |
The shaded cells show that there are statistically significant differences compared with other counties.
manifests that compared with other counties, P < .05.
The mutant genotypes of different counties in Meizhou area
| Mutant genotype | Case number (n = 16 158) (percentage, %) | Total (n = 16 158) | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Xingning (n = 3146) | Wuhua (n = 3077) | Meixian (n = 2743) | Meijiang (n = 2098) | Fengshun (n = 1859) | Jiaoling (n = 1349) | Pingyuan (n = 966) | Dabu (n = 920) | ||
| α‐thalassemia | 693 (22.03) | 703 (22.85) | 615 (22.42) | 435 (20.73) | 411 (22.11) | 295 (21.87) | 230 (23.81) | 203 (22.07) | 3585 (22.19) |
| ‐‐SEA/αα, βN/βN | 435 (13.83) | 425 (13.81) | 394 (14.36) | 298 (14.20) | 248 (13.34) | 181 (13.42) | 146 (15.11) | 129 (14.02) | 2256 (13.96) |
| ‐α3.7/αα, βN/βN | 115 (3.66) | 114 (4.68) | 99 (3.61) | 60 (2.86) | 68 (3.66) | 47 (3.48) | 34 (3.52) | 28 (3.04) | 565 (3.42) |
| ‐α4.2/αα, βN/βN | 46 (1.46) | 42 (1.36) | 34 (1.24) | 28 (1.33) | 18 (0.97) | 33 (2.45) | 18 (1.86) | 14 (1.52) | 233 (1.44) |
| ‐‐SEA/‐α3.7, βN/βN | 26 (0.83) | 37 (1.20) | 21 (0.77) | 16 (0.76) | 15 (0.81) | 6 (0.44) | 15 (1.55) | 5 (0.54) | 141 (0.87) |
| αCSα/αα, βN/βN | 8 (0.25) | 17 (0.55) | 26 (0.95) | 14 (0.67) | 14 (0.75) | 11 (0.82) | 4 (0.41) | 7 (0.76) | 101 (0.62) |
| αWSα/αα, βN/βN | 27 (0.86) | 18 (0.58) | 9 (0.33) | 7 (0.33) | 13 (0.70) | 4 (0.30) | 8 (0.83) | 4 (0.43) | 90 (0.56) |
| ‐‐SEA/‐α4.2, βN/βN | 17 (0.54) | 11 (0.36) | 14 (0.51) | 6 (0.29) | 10 (0.54) | 4 (0.30) | 4 (0.41) | 1 (0.10) | 67 (0.41) |
| ‐‐SEA/αCSα, βN/βN | 4 (0.13) | 14 (0.45) | 11 (0.40) | 2 (0.10) | 7 (0.38) | 2 (0.15) | 1 (0.10) | 11 (1.20) | 52 (0.32) |
| αQSα/αα, βN/βN | 3 (0.10) | 7 (0.23) | 2 (0.07) | 1 (0.05) | 9 (0.48) | 5 (0.37) | 0 (0) | 2 (0.22) | 29 (0.18) |
| ‐‐SEA/αWSα, βN/βN | 4 (0.13) | 5 (0.16) | 4 (0.15) | 0 (0) | 2 (0.11) | 0 (0) | 0 (0) | 1 (0.10) | 16 (0.10) |
| Others | 8 (0.25) | 13 (0.42) | 1 (0.04) | 3 (0.14) | 7 (0.38) | 2 (0.15) | 0 (0) | 1 (0.11) | 35 (0.22) |
| β‐thalassemia | 338 (10.74) | 336 (10.92) | 275 (10.03) | 218 (10.39) | 184 (9.90) | 144 (10.67) | 111 (11.49) | 95 (10.33) | 1701 (10.53) |
| αα/αα, βIVS‐II‐654/βN | 142 (4.51) | 123 (4.00) | 101 (3.68) | 92 (4.39) | 67 (3.60) | 69 (5.11) | 56 (5.80) | 37 (4.02) | 687 (4.25) |
| αα/αα, βCD41‐42/βN | 94 (2.99) | 127 (4.13) | 97 (3.54) | 64 (3.05) | 77 (4.14) | 39 (2.89) | 31 (2.30) | 34 (3.70) | 563 (3.48) |
| αα/αα, βCD17/βN | 37 (1.18) | 40 (1.30) | 26 (0.95) | 19 (0.91) | 17 (0.91) | 7 (0.52) | 7 (0.72) | 10 (1.09) | 163 (1.01) |
| αα/αα, β‐28/βN | 36 (1.14) | 26 (0.84) | 26 (0.95) | 15 (0.72) | 12 (0.65) | 17 (1.26) | 15 (1.55) | 2 (0.22) | 149 (0.92) |
| αα/αα, βCD27‐28/βN | 8 (0.25) | 1 (0.03) | 5 (0.18) | 6 (0.29) | 0 (0) | 3 (0.22) | 2 (0.19) | 4 (0.43) | 29 (0.18) |
| αα/αα, βE/βN | 1 (0.03) | 0 (0) | 4 (0.15) | 9 (0.43) | 6 (0.32) | 5 (0.37) | 0 (0) | 2 (0.22) | 27 (0.17) |
| αα/αα, βCD71‐72/βN | 7 (0.22) | 6 (0.19) | 4 (0.15) | 2 (0.10) | 0 (0) | 2 (0.15) | 0 (0) | 1 (0.11) | 22 (0.14) |
| αα/αα, βCap/βN | 0 (0) | 2 (0.06) | 5 (0.18) | 4 (0.19) | 2 (0.11) | 0 (0) | 0 (0) | 2 (0.22) | 15 (0.09) |
| αα/αα, β‐29/βN | 5 (0.16) | 3 (0.10) | 2 (0.07) | 1 (0.05) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 11 (0.07) |
| αα/αα, βCD14‐15/βN | 2 (0.06) | 0 (0) | 1 (0.04) | 1 (0.05) | 1 (0.05) | 0 (0) | 0 (0) | 0 (0) | 5 (0.03) |
| Others | 6 (0.19) | 8 (0.26) | 4 (0.15) | 5 (0.24) | 2 (0.11) | 2 (0.15) | 0 (0) | 3 (0.33) | 30 (0.19) |
The shaded cells show that there are statistically significant differences compared with other counties.
manifests that compared with other counties, P < .05.
Allele frequencies of G6PD in different counties of Meizhou area
| Variable | Allele number (percentage, %) | Total (n = 805) | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Xingning (n = 185) | Wuhua (n = 154) | Meixian (n = 119) | Meijiang (n = 89) | Fengshun (n = 102) | Jiaoling (n = 46) | Pingyuan (n = 52) | Dabu (n = 58) | ||
| c.1376 G → T | 19(10.27) | 28 (18.18) | 12 (10.08) | 4 (4.49) | 10 (9.80) | 2 (4.35) | 9 (17.31) | 7 (12.07) | 91 (11.30) |
| c.1388 G → A | 16 (8.65) | 14 (9.09) | 12 (10.08) | 13 (14.61) | 12 (11.76) | 4 (8.70) | 4 (7.89) | 3 (5.17) | 78 (9.69) |
| c.95 A → G | 7 (3.78) | 4 (2.60) | 4 (3.36) | 1 (1.12) | 1 (0.98) | 0 (0) | 0 (0) | 1 (1.72) | 18 (2.24) |
| c.1024 C → T | 1 (0.54) | 1 (0.65) | 2 (1.68) | 2 (2.25) | 0 (0) | 1 (2.17) | 0 (0) | 1 (1.72) | 8 (0.99) |
| c.871G → A | 1 (0.54) | 0 (0) | 1 (0.84) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 2 (0.25) |
| c.1360 C → T | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 1 (1.92) | 0 (0) | 1 (0.12) |
| Total | 44 (23.78) | 47 (30.52) | 31 (26.05) | 20 (22.47) | 23 (22.55) | 7 (15.22) | 14 (26.92) | 12 (20.69) | 198 (24.60) |
The shaded cells show that there are statistically significant differences compared with other counties.
manifests that compared with other counties, P < .05.