Literature DB >> 34697481

Nanometre-scale imaging and AI reveal the interior of whole cells.

Jason R Swedlow, Lucy Collinson.   

Abstract

Entities:  

Keywords:  Cell biology; Microscopy

Mesh:

Year:  2021        PMID: 34697481     DOI: 10.1038/d41586-021-02776-0

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


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  9 in total

1.  Site-specific 3D imaging of cells and tissues with a dual beam microscope.

Authors:  Jurgen A W Heymann; Mike Hayles; Ingo Gestmann; Lucille A Giannuzzi; Ben Lich; Sriram Subramaniam
Journal:  J Struct Biol       Date:  2006-04-04       Impact factor: 2.867

2.  Connectomic reconstruction of the inner plexiform layer in the mouse retina.

Authors:  Moritz Helmstaedter; Kevin L Briggman; Srinivas C Turaga; Viren Jain; H Sebastian Seung; Winfried Denk
Journal:  Nature       Date:  2013-08-08       Impact factor: 49.962

3.  Deep learning for automatic segmentation of the nuclear envelope in electron microscopy data, trained with volunteer segmentations.

Authors:  Helen Spiers; Harry Songhurst; Luke Nightingale; Joost de Folter; Roger Hutchings; Christopher J Peddie; Anne Weston; Amy Strange; Steve Hindmarsh; Chris Lintott; Lucy M Collinson; Martin L Jones
Journal:  Traffic       Date:  2021-05-16       Impact factor: 6.215

4.  A connectome and analysis of the adult Drosophila central brain.

Authors:  Louis K Scheffer; C Shan Xu; Michal Januszewski; Zhiyuan Lu; Shin-Ya Takemura; Kenneth J Hayworth; Gary B Huang; Kazunori Shinomiya; Jeremy Maitlin-Shepard; Stuart Berg; Jody Clements; Philip M Hubbard; William T Katz; Lowell Umayam; Ting Zhao; David Ackerman; Tim Blakely; John Bogovic; Tom Dolafi; Dagmar Kainmueller; Takashi Kawase; Khaled A Khairy; Laramie Leavitt; Peter H Li; Larry Lindsey; Nicole Neubarth; Donald J Olbris; Hideo Otsuna; Eric T Trautman; Masayoshi Ito; Alexander S Bates; Jens Goldammer; Tanya Wolff; Robert Svirskas; Philipp Schlegel; Erika Neace; Christopher J Knecht; Chelsea X Alvarado; Dennis A Bailey; Samantha Ballinger; Jolanta A Borycz; Brandon S Canino; Natasha Cheatham; Michael Cook; Marisa Dreher; Octave Duclos; Bryon Eubanks; Kelli Fairbanks; Samantha Finley; Nora Forknall; Audrey Francis; Gary Patrick Hopkins; Emily M Joyce; SungJin Kim; Nicole A Kirk; Julie Kovalyak; Shirley A Lauchie; Alanna Lohff; Charli Maldonado; Emily A Manley; Sari McLin; Caroline Mooney; Miatta Ndama; Omotara Ogundeyi; Nneoma Okeoma; Christopher Ordish; Nicholas Padilla; Christopher M Patrick; Tyler Paterson; Elliott E Phillips; Emily M Phillips; Neha Rampally; Caitlin Ribeiro; Madelaine K Robertson; Jon Thomson Rymer; Sean M Ryan; Megan Sammons; Anne K Scott; Ashley L Scott; Aya Shinomiya; Claire Smith; Kelsey Smith; Natalie L Smith; Margaret A Sobeski; Alia Suleiman; Jackie Swift; Satoko Takemura; Iris Talebi; Dorota Tarnogorska; Emily Tenshaw; Temour Tokhi; John J Walsh; Tansy Yang; Jane Anne Horne; Feng Li; Ruchi Parekh; Patricia K Rivlin; Vivek Jayaraman; Marta Costa; Gregory Sxe Jefferis; Kei Ito; Stephan Saalfeld; Reed George; Ian A Meinertzhagen; Gerald M Rubin; Harald F Hess; Viren Jain; Stephen M Plaza
Journal:  Elife       Date:  2020-09-07       Impact factor: 8.140

5.  Whole-brain serial-section electron microscopy in larval zebrafish.

Authors:  David Grant Colburn Hildebrand; Marcelo Cicconet; Russel Miguel Torres; Woohyuk Choi; Tran Minh Quan; Jungmin Moon; Arthur Willis Wetzel; Andrew Scott Champion; Brett Jesse Graham; Owen Randlett; George Scott Plummer; Ruben Portugues; Isaac Henry Bianco; Stephan Saalfeld; Alexander David Baden; Kunal Lillaney; Randal Burns; Joshua Tzvi Vogelstein; Alexander Franz Schier; Wei-Chung Allen Lee; Won-Ki Jeong; Jeff William Lichtman; Florian Engert
Journal:  Nature       Date:  2017-05-10       Impact factor: 49.962

6.  Cellpose: a generalist algorithm for cellular segmentation.

Authors:  Carsen Stringer; Tim Wang; Michalis Michaelos; Marius Pachitariu
Journal:  Nat Methods       Date:  2020-12-14       Impact factor: 47.990

7.  A Complete Electron Microscopy Volume of the Brain of Adult Drosophila melanogaster.

Authors:  Zhihao Zheng; J Scott Lauritzen; Eric Perlman; Camenzind G Robinson; Matthew Nichols; Daniel Milkie; Omar Torrens; John Price; Corey B Fisher; Nadiya Sharifi; Steven A Calle-Schuler; Lucia Kmecova; Iqbal J Ali; Bill Karsh; Eric T Trautman; John A Bogovic; Philipp Hanslovsky; Gregory S X E Jefferis; Michael Kazhdan; Khaled Khairy; Stephan Saalfeld; Richard D Fetter; Davi D Bock
Journal:  Cell       Date:  2018-07-19       Impact factor: 41.582

8.  nucleAIzer: A Parameter-free Deep Learning Framework for Nucleus Segmentation Using Image Style Transfer.

Authors:  Reka Hollandi; Abel Szkalisity; Timea Toth; Ervin Tasnadi; Csaba Molnar; Botond Mathe; Istvan Grexa; Jozsef Molnar; Arpad Balind; Mate Gorbe; Maria Kovacs; Ede Migh; Allen Goodman; Tamas Balassa; Krisztian Koos; Wenyu Wang; Juan Carlos Caicedo; Norbert Bara; Ferenc Kovacs; Lassi Paavolainen; Tivadar Danka; Andras Kriston; Anne Elizabeth Carpenter; Kevin Smith; Peter Horvath
Journal:  Cell Syst       Date:  2020-05-07       Impact factor: 10.304

9.  A call for public archives for biological image data.

Authors:  Jan Ellenberg; Jason R Swedlow; Mary Barlow; Charles E Cook; Ugis Sarkans; Ardan Patwardhan; Alvis Brazma; Ewan Birney
Journal:  Nat Methods       Date:  2018-11       Impact factor: 28.547

  9 in total

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