| Literature DB >> 34684691 |
Joanna Bogusiewicz1, Katarzyna Burlikowska1, Karol Jaroch1, Paulina Zofia Gorynska1, Krzysztof Gorynski1, Marcin Birski2, Jacek Furtak2, Dariusz Paczkowski2, Marek Harat2,3, Barbara Bojko1.
Abstract
Alterations in the carnitine shuttle system may be an indication of the presence of cancer. As such, in-depth analyses of this pathway in different malignant tumors could be important for the detection and treatment of this disease. The current study aims to assess the profiles of carnitine and acylcarnitines in gliomas with respect to their grade, the presence of isocitrate dehydrogenase (IDH) mutations, and 1p/19q co-deletion. Brain tumors obtained from 19 patients were sampled on-site using solid-phase microextraction (SPME) immediately following excision. Analytes were desorbed and then analyzed via liquid chromatography-high-resolution mass spectrometry. The results showed that SPME enabled the extraction of carnitine and 22 acylcarnitines. An analysis of the correlation factor revealed the presence of two separate clusters: short-chain and long-chain carnitine esters. Slightly higher carnitine and acylcarnitine concentrations were observed in the higher-malignancy tumor samples (high vs. low grade) and in those samples with worse projected clinical outcomes (without vs. with IDH mutation; without vs. with 1p/19q co-deletion). Thus, the proposed chemical biopsy approach offers a simple solution for on-site sampling that enables sample preservation, thus supporting comprehensive multi-method analyses.Entities:
Keywords: acylcarnitine; cancer; carnitine; glioma; liquid chromatography–mass spectrometry LC–MS; solid-phase microextraction SPME
Mesh:
Substances:
Year: 2021 PMID: 34684691 PMCID: PMC8540799 DOI: 10.3390/molecules26206112
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Acylcarnitines identified in gliomas sampled via solid-phase microextraction (SPME). Table 1 represents identification details and ratios of normalized peak areas for detected analytes. AC—acylcarnitine; del—presence of 1p/19q co-deletion; HGG—high-grade glioma; IDHm—IDH mutation, IDHw—IDH wild-type; LCAC—long-chain-length acylcarnitine; LGG—low-grade glioma; MCAC—medium-chain-length acylcarnitines; n-del—absence of 1p/19q co-deletion; SCAC—short-chain-length acylcarnitines.
| Group | AC | Chemical Formula | M/Z | RT [min] | HGG: LGG | IDHw: IDHm | n-del: del |
|---|---|---|---|---|---|---|---|
|
|
| C9H18O4N1 | 204.1231 | 12.46 | 0.87 | 0.97 | 0.93 |
|
| C10H20O4N1 | 218.1387 | 11.00 | 2.89 a | 1.68 | 1.68 | |
|
| C11H22O4N1 | 232.1543 | 9.72 | 0.85 | 0.94 | 0.84 | |
| AC C5:1 | C12H22O4N1 | 244.1543 | 9.28 | 0.95 | 0.78 | 0.83 | |
|
| C12H24O4N1 | 246.1700 | 8.96 | 1.38 | 1.00 | 1.22 | |
|
|
| C13H26O4N1 | 260.1856 | 8.37 | 0.66 | 0.91 | 1.11 |
|
| C15H30O4N1 | 288.2169 | 7.79 | 1.20 | 1.04 | 0.95 | |
|
| C16H32O4N1 | 302.2325 | 7.62 | 29.98 a | 2.12 | 1.37 | |
|
| C17H32O4N1 | 314.2326 | 7.52 | 3.86 a | 1.18 | 0.74 | |
|
| C17H34O4N1 | 316.2484 | 7.48 | 1.53 | 1.09 | 0.93 | |
|
|
| C19H36O4N1 | 342.2640 | 7.27 | 1.50 | 1.56 | 0.99 |
|
| C19H38O4N1 | 344.2796 | 7.23 | 1.34 | 1.66 b | 1.22 | |
|
| C21H38O4N1 | 368.2797 | 7.12 | 2.72 a | 1.94 | 1.33 | |
|
| C21H40O4N1 | 370.2953 | 7.07 | 1.06 | 1.19 | 1.02 | |
|
| C21H42O4N1 | 372.3108 | 7.10 | 0.89 | 1.08 | 0.96 | |
|
| C23H44O4N1 | 398.3266 | 6.96 | 0.82 | 0.60 b | 0.59 c | |
|
| C23H46O4N1 | 400.3423 | 6.96 | 0.92 | 0.96 | 1.06 | |
|
| C25H46O4N1 | 424.3422 | 6.89 | 1.05 | 0.79 | 0.86 | |
|
| C25H48O4N1 | 426.3579 | 6.84 | 0.87 | 0.79 | 1.00 | |
|
| C27H46O4N1 | 448.3424 | 6.80 | 2.43 | 1.77 | 1.73 | |
|
| C27H48O4N1 | 450.3578 | 6.78 | 13.89 a | 2.87 | 2.17 | |
|
| C27H50O4N1 | 454.3891 | 6.71 | 0.71 | 1.25 | 11.19 |
a the average normalized peak area for HGG is statistically significantly different from LGG, p < 0.05; b the average normalized peak area for IDHw is statistically significantly different from IDHm, p < 0.05; c the average normalized peak area for n-del is statistically significantly different from del, p < 0.05.
Figure 1Carnitine and acylcarnitines correlation network. Only statistically significant correlation factors were presented (p < 0.05). AC—acylcarnitine; C—carnitine; SCAC—short-chain-length acylcarnitines; MCAC—medium-chain-length acylcarnitines; LCAC—long-chain-length acylcarnitines.
Figure 2Ratios of SCAC, MCAC, and LCAC in the studied groups: (A) low-grade (LGG) and high-grade glioma (HGG); (B) IDH mutation status—IDH mutant (IDHm) and IDH wild-type (IDHw); (C) 1p/19q co-deletion—presence of deletion (del) and absence of deletion (n-del). AC—acylcarnitine; del—presence of 1p/19q co-deletion; HGG—high-grade glioma; IDHm—IDH mutation, IDHw—IDH wild-type; LCAC—long-chain-length acylcarnitine; LGG—low-grade glioma; MCAC—medium-chain-length acylcarnitines; n-del—absence of 1p/19q co-deletion; SCAC—short-chain-length acylcarnitines; a the average peak area for HGG is statistically significantly different from LGG, p < 0.05.