Literature DB >> 34664402

The importance of RNA modifications: From cells to muscle physiology.

Anindhya Sundar Das1,2, Juan D Alfonzo2,3, Federica Accornero1,2.   

Abstract

Naturally occurring post-transcriptional chemical modifications serve critical roles in impacting RNA structure and function. More directly, modifications may affect RNA stability, intracellular transport, translational efficiency, and fidelity. The combination of effects caused by modifications are ultimately linked to gene expression regulation at a genome-wide scale. The latter is especially true in systems that undergo rapid metabolic and or translational remodeling in response to external stimuli, such as the presence of stressors, but beyond that, modifications may also affect cell homeostasis. Although examples of the importance of RNA modifications in translation are accumulating rapidly, still what these contribute to the function of complex physiological systems such as muscle is only recently emerging. In the present review, we will introduce key information on various modifications and highlight connections between those and cellular malfunctions. In passing, we will describe well-documented roles for modifications in the nervous system and use this information as a stepping stone to emphasize a glaring paucity of knowledge on the role of RNA modifications in heart and skeletal muscle, with particular emphasis on mitochondrial function in those systems. This article is categorized under: RNA in Disease and Development > RNA in Disease RNA Processing > RNA Editing and Modification.
© 2021 Wiley Periodicals LLC.

Entities:  

Keywords:  mRNA; mitochondria; modifications; muscle; rRNA; tRNA; translation

Mesh:

Substances:

Year:  2021        PMID: 34664402      PMCID: PMC9016094          DOI: 10.1002/wrna.1700

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.349


  163 in total

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Authors:  Daniel F Bogenhagen
Journal:  Biochim Biophys Acta       Date:  2011-11-27

2.  Biosynthesis of wybutosine, a hyper-modified nucleoside in eukaryotic phenylalanine tRNA.

Authors:  Akiko Noma; Yohei Kirino; Yoshiho Ikeuchi; Tsutomu Suzuki
Journal:  EMBO J       Date:  2006-04-27       Impact factor: 11.598

Review 3.  Transfer RNA methytransferases and their corresponding modifications in budding yeast and humans: activities, predications, and potential roles in human health.

Authors:  William L Towns; Thomas J Begley
Journal:  DNA Cell Biol       Date:  2011-12-22       Impact factor: 3.311

Review 4.  Posttranscriptional RNA Modifications: playing metabolic games in a cell's chemical Legoland.

Authors:  Mark Helm; Juan D Alfonzo
Journal:  Chem Biol       Date:  2013-12-05

5.  A protein-only RNase P in human mitochondria.

Authors:  Scott C Walker; David R Engelke
Journal:  Cell       Date:  2008-10-31       Impact factor: 41.582

6.  The m1A landscape on cytosolic and mitochondrial mRNA at single-base resolution.

Authors:  Modi Safra; Aldema Sas-Chen; Ronit Nir; Roni Winkler; Aharon Nachshon; Dan Bar-Yaacov; Matthias Erlacher; Walter Rossmanith; Noam Stern-Ginossar; Schraga Schwartz
Journal:  Nature       Date:  2017-10-25       Impact factor: 49.962

7.  Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA.

Authors:  Jeffrey E Squires; Hardip R Patel; Marco Nousch; Tennille Sibbritt; David T Humphreys; Brian J Parker; Catherine M Suter; Thomas Preiss
Journal:  Nucleic Acids Res       Date:  2012-02-16       Impact factor: 16.971

8.  TRMT5 Mutations Cause a Defect in Post-transcriptional Modification of Mitochondrial tRNA Associated with Multiple Respiratory-Chain Deficiencies.

Authors:  Christopher A Powell; Robert Kopajtich; Aaron R D'Souza; Joanna Rorbach; Laura S Kremer; Ralf A Husain; Cristina Dallabona; Claudia Donnini; Charlotte L Alston; Helen Griffin; Angela Pyle; Patrick F Chinnery; Tim M Strom; Thomas Meitinger; Richard J Rodenburg; Gudrun Schottmann; Markus Schuelke; Nadine Romain; Ronald G Haller; Ileana Ferrero; Tobias B Haack; Robert W Taylor; Holger Prokisch; Michal Minczuk
Journal:  Am J Hum Genet       Date:  2015-07-16       Impact factor: 11.025

Review 9.  Modifications and functional genomics of human transfer RNA.

Authors:  Tao Pan
Journal:  Cell Res       Date:  2018-02-20       Impact factor: 25.617

10.  Signs of cardiac autonomic imbalance and proarrhythmic remodeling in FTO deficient mice.

Authors:  Luca Carnevali; Gallia Graiani; Stefano Rossi; Mumna Al Banchaabouchi; Emilio Macchi; Federico Quaini; Nadia Rosenthal; Andrea Sgoifo
Journal:  PLoS One       Date:  2014-04-17       Impact factor: 3.240

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  3 in total

Review 1.  Recent insights into the structure, function, and regulation of the eukaryotic transfer RNA splicing endonuclease complex.

Authors:  Cassandra K Hayne; Tanae A Lewis; Robin E Stanley
Journal:  Wiley Interdiscip Rev RNA       Date:  2022-02-14       Impact factor: 9.349

2.  Mutant NPM1-Regulated FTO-Mediated m6A Demethylation Promotes Leukemic Cell Survival via PDGFRB/ERK Signaling Axis.

Authors:  Qiaoling Xiao; Li Lei; Jun Ren; Meixi Peng; Yipei Jing; Xueke Jiang; Junpeng Huang; Yonghong Tao; Can Lin; Jing Yang; Minghui Sun; Lisha Tang; Xingyu Wei; Zailin Yang; Ling Zhang
Journal:  Front Oncol       Date:  2022-02-08       Impact factor: 6.244

Review 3.  The Epitranscriptomic Mechanism of Metal Toxicity and Carcinogenesis.

Authors:  Chengfeng Yang; Zhishan Wang
Journal:  Int J Mol Sci       Date:  2022-10-05       Impact factor: 6.208

  3 in total

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