Literature DB >> 34647400

Xanthopsin-Like Systems via Site-Specific Click-Functionalization of a Retinoic Acid Binding Protein.

Giusy Tassone1, Marco Paolino1, Cecilia Pozzi1, Annalisa Reale1, Laura Salvini2, Gianluca Giorgi1, Maurizio Orlandini1, Federico Galvagni1, Stefano Mangani1, Xuchun Yang3, Benedetta Carlotti4, Fausto Ortica4, Loredana Latterini4, Massimo Olivucci1,3, Andrea Cappelli1.   

Abstract

The use of light-responsive proteins to control both living or synthetic cells, is at the core of the expanding fields of optogenetics and synthetic biology. It is thus apparent that a richer reaction toolbox for the preparation of such systems is of fundamental importance. Here, we provide a proof-of-principle demonstration that Morita-Baylis-Hillman adducts can be employed to perform a facile site-specific, irreversible and diastereoselective click-functionalization of a lysine residue buried into a lipophilic binding pocket and yielding an unnatural chromophore with an extended π-system. In doing so we effectively open the path to the in vitro preparation of a library of synthetic proteins structurally reminiscent of xanthopsin eubacterial photoreceptors. We argue that such a library, made of variable unnatural chromophores inserted in an easy-to-mutate and crystallize retinoic acid transporter, significantly expand the scope of the recently introduced rhodopsin mimics as both optogenetic and "lab-on-a-molecule" tools.
© 2021 Wiley-VCH GmbH.

Entities:  

Keywords:  Morita-Baylis-Hillman adducts; PYP-like chromophores; light-sensitive proteins; site-specific reactions; synthetic xanthopsin-like proteins

Mesh:

Substances:

Year:  2021        PMID: 34647400      PMCID: PMC8934143          DOI: 10.1002/cbic.202100449

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  39 in total

1.  Structural and dynamic changes of photoactive yellow protein during its photocycle in solution.

Authors:  G Rubinstenn; G W Vuister; F A Mulder; P E Düx; R Boelens; K J Hellingwerf; R Kaptein
Journal:  Nat Struct Biol       Date:  1998-07

2.  Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser.

Authors:  Przemyslaw Nogly; Tobias Weinert; Daniel James; Sergio Carbajo; Dmitry Ozerov; Antonia Furrer; Dardan Gashi; Veniamin Borin; Petr Skopintsev; Kathrin Jaeger; Karol Nass; Petra Båth; Robert Bosman; Jason Koglin; Matthew Seaberg; Thomas Lane; Demet Kekilli; Steffen Brünle; Tomoyuki Tanaka; Wenting Wu; Christopher Milne; Thomas White; Anton Barty; Uwe Weierstall; Valerie Panneels; Eriko Nango; So Iwata; Mark Hunter; Igor Schapiro; Gebhard Schertler; Richard Neutze; Jörg Standfuss
Journal:  Science       Date:  2018-06-14       Impact factor: 47.728

Review 3.  Theory and Simulation of the Ultrafast Double-Bond Isomerization of Biological Chromophores.

Authors:  Samer Gozem; Hoi Ling Luk; Igor Schapiro; Massimo Olivucci
Journal:  Chem Rev       Date:  2017-10-30       Impact factor: 60.622

4.  Bile Acid Binding Protein Functionalization Leads to a Fully Synthetic Rhodopsin Mimic.

Authors:  Katiuscia Pagano; Marco Paolino; Stefania Fusi; Vinicio Zanirato; Claudio Trapella; Germano Giuliani; Andrea Cappelli; Serena Zanzoni; Henriette Molinari; Laura Ragona; Massimo Olivucci
Journal:  J Phys Chem Lett       Date:  2019-04-22       Impact factor: 6.475

5.  Optogenetic Inhibitor of the Transcription Factor CREB.

Authors:  Ahmed M Ali; Jakeb M Reis; Yan Xia; Asim J Rashid; Valentina Mercaldo; Brandon J Walters; Katherine E Brechun; Vitali Borisenko; Sheena A Josselyn; John Karanicolas; G Andrew Woolley
Journal:  Chem Biol       Date:  2015-11-19

6.  [18F]SiFA-isothiocyanate: a new highly effective radioactive labeling agent for lysine-containing proteins.

Authors:  Pedro Rosa-Neto; Björn Wängler; Ljuba Iovkova; Guido Boening; Andrew Reader; Klaus Jurkschat; Esther Schirrmacher
Journal:  Chembiochem       Date:  2009-05-25       Impact factor: 3.164

7.  A Photoisomerizing Rhodopsin Mimic Observed at Atomic Resolution.

Authors:  Meisam Nosrati; Tetyana Berbasova; Chrysoula Vasileiou; Babak Borhan; James H Geiger
Journal:  J Am Chem Soc       Date:  2016-07-05       Impact factor: 15.419

8.  The microbial opsin family of optogenetic tools.

Authors:  Feng Zhang; Johannes Vierock; Ofer Yizhar; Lief E Fenno; Satoshi Tsunoda; Arash Kianianmomeni; Matthias Prigge; Andre Berndt; John Cushman; Jürgen Polle; Jon Magnuson; Peter Hegemann; Karl Deisseroth
Journal:  Cell       Date:  2011-12-23       Impact factor: 41.582

9.  Development of Imidazole-Reactive Molecules Leading to a New Aggregation-Induced Emission Fluorophore Based on the Cinnamic Scaffold.

Authors:  Vincenzo Razzano; Marco Paolino; Annalisa Reale; Germano Giuliani; Roberto Artusi; Gianfranco Caselli; Michela Visintin; Francesco Makovec; Alessandro Donati; Francesca Villafiorita-Monteleone; Chiara Botta; Andrea Cappelli
Journal:  ACS Omega       Date:  2017-09-06

10.  Three-dimensional view of ultrafast dynamics in photoexcited bacteriorhodopsin.

Authors:  Gabriela Nass Kovacs; Jacques-Philippe Colletier; Marie Luise Grünbein; Yang Yang; Till Stensitzki; Alexander Batyuk; Sergio Carbajo; R Bruce Doak; David Ehrenberg; Lutz Foucar; Raphael Gasper; Alexander Gorel; Mario Hilpert; Marco Kloos; Jason E Koglin; Jochen Reinstein; Christopher M Roome; Ramona Schlesinger; Matthew Seaberg; Robert L Shoeman; Miriam Stricker; Sébastien Boutet; Stefan Haacke; Joachim Heberle; Karsten Heyne; Tatiana Domratcheva; Thomas R M Barends; Ilme Schlichting
Journal:  Nat Commun       Date:  2019-07-18       Impact factor: 14.919

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  2 in total

1.  Design, synthesis and biological evaluation of light-driven on-off multitarget AChE and MAO-B inhibitors.

Authors:  Marco Paolino; Mariagrazia Rullo; Samuele Maramai; Modesto de Candia; Leonardo Pisani; Marco Catto; Claudia Mugnaini; Antonella Brizzi; Andrea Cappelli; Massimo Olivucci; Federico Corelli; Cosimo D Altomare
Journal:  RSC Med Chem       Date:  2022-06-01

2.  Design, Synthesis and Characterization of a Visible-Light-Sensitive Molecular Switch and Its PEGylation Towards a Self-Assembling Molecule.

Authors:  Marco Paolino; Mario Saletti; Annalisa Reale; Mariano Licciardi; Paola Varvarà; Arnaud Marquette; Jérémie Léonard; Claudia Bonechi; Alessandro Donati; Gianluca Giorgi; Germano Giuliani; Benedetta Carlotti; Fausto Ortica; Loredana Latterini; Mariangela Gentile; Eugenio Paccagnini; Massimo Olivucci; Andrea Cappelli
Journal:  Chemistry       Date:  2022-07-13       Impact factor: 5.020

  2 in total

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