Literature DB >> 34606445

Domain Adaptation for Medical Image Analysis: A Survey.

Hao Guan, Mingxia Liu.   

Abstract

Machine learning techniques used in computer-aided medical image analysis usually suffer from the domain shift problem caused by different distributions between source/reference data and target data. As a promising solution, domain adaptation has attracted considerable attention in recent years. The aim of this paper is to survey the recent advances of domain adaptation methods in medical image analysis. We first present the motivation of introducing domain adaptation techniques to tackle domain heterogeneity issues for medical image analysis. Then we provide a review of recent domain adaptation models in various medical image analysis tasks. We categorize the existing methods into shallow and deep models, and each of them is further divided into supervised, semi-supervised and unsupervised methods. We also provide a brief summary of the benchmark medical image datasets that support current domain adaptation research. This survey will enable researchers to gain a better understanding of the current status, challenges and future directions of this energetic research field.

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Mesh:

Year:  2022        PMID: 34606445      PMCID: PMC9011180          DOI: 10.1109/TBME.2021.3117407

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.756


  74 in total

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Journal:  IEEE Trans Med Imaging       Date:  2000-03       Impact factor: 10.048

Review 2.  Deep learning in radiology: An overview of the concepts and a survey of the state of the art with focus on MRI.

Authors:  Maciej A Mazurowski; Mateusz Buda; Ashirbani Saha; Mustafa R Bashir
Journal:  J Magn Reson Imaging       Date:  2018-12-21       Impact factor: 4.813

3.  Generalizing Deep Learning for Medical Image Segmentation to Unseen Domains via Deep Stacked Transformation.

Authors:  Ling Zhang; Xiaosong Wang; Dong Yang; Thomas Sanford; Stephanie Harmon; Baris Turkbey; Bradford J Wood; Holger Roth; Andriy Myronenko; Daguang Xu; Ziyue Xu
Journal:  IEEE Trans Med Imaging       Date:  2020-02-12       Impact factor: 10.048

4.  Domain adaptation for microscopy imaging.

Authors:  Carlos Becker; C Mario Christoudias; Pascal Fua
Journal:  IEEE Trans Med Imaging       Date:  2014-12-02       Impact factor: 10.048

5.  Epithelium-Stroma Classification via Convolutional Neural Networks and Unsupervised Domain Adaptation in Histopathological Images.

Authors:  Yue Huang; Han Zheng; Chi Liu; Xinghao Ding; Gustavo K Rohde
Journal:  IEEE J Biomed Health Inform       Date:  2017-04-06       Impact factor: 5.772

6.  Visual Correspondences for Unsupervised Domain Adaptation on Electron Microscopy Images.

Authors:  Roger Bermudez-Chacon; Okan Altingovde; Carlos Becker; Mathieu Salzmann; Pascal Fua
Journal:  IEEE Trans Med Imaging       Date:  2019-10-09       Impact factor: 10.048

Review 7.  Deep Learning in Medical Image Analysis.

Authors:  Dinggang Shen; Guorong Wu; Heung-Il Suk
Journal:  Annu Rev Biomed Eng       Date:  2017-03-09       Impact factor: 9.590

Review 8.  The WU-Minn Human Connectome Project: an overview.

Authors:  David C Van Essen; Stephen M Smith; Deanna M Barch; Timothy E J Behrens; Essa Yacoub; Kamil Ugurbil
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

9.  A Survey of Unsupervised Deep Domain Adaptation.

Authors:  Garrett Wilson; Diane J Cook
Journal:  ACM Trans Intell Syst Technol       Date:  2020-07-05       Impact factor: 4.654

Review 10.  The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).

Authors:  Bjoern H Menze; Andras Jakab; Stefan Bauer; Jayashree Kalpathy-Cramer; Keyvan Farahani; Justin Kirby; Yuliya Burren; Nicole Porz; Johannes Slotboom; Roland Wiest; Levente Lanczi; Elizabeth Gerstner; Marc-André Weber; Tal Arbel; Brian B Avants; Nicholas Ayache; Patricia Buendia; D Louis Collins; Nicolas Cordier; Jason J Corso; Antonio Criminisi; Tilak Das; Hervé Delingette; Çağatay Demiralp; Christopher R Durst; Michel Dojat; Senan Doyle; Joana Festa; Florence Forbes; Ezequiel Geremia; Ben Glocker; Polina Golland; Xiaotao Guo; Andac Hamamci; Khan M Iftekharuddin; Raj Jena; Nigel M John; Ender Konukoglu; Danial Lashkari; José Antonió Mariz; Raphael Meier; Sérgio Pereira; Doina Precup; Stephen J Price; Tammy Riklin Raviv; Syed M S Reza; Michael Ryan; Duygu Sarikaya; Lawrence Schwartz; Hoo-Chang Shin; Jamie Shotton; Carlos A Silva; Nuno Sousa; Nagesh K Subbanna; Gabor Szekely; Thomas J Taylor; Owen M Thomas; Nicholas J Tustison; Gozde Unal; Flor Vasseur; Max Wintermark; Dong Hye Ye; Liang Zhao; Binsheng Zhao; Darko Zikic; Marcel Prastawa; Mauricio Reyes; Koen Van Leemput
Journal:  IEEE Trans Med Imaging       Date:  2014-12-04       Impact factor: 10.048

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  8 in total

1.  Domain-Prior-Induced Structural MRI Adaptation for Clinical Progression Prediction of Subjective Cognitive Decline.

Authors:  Minhui Yu; Hao Guan; Yuqi Fang; Ling Yue; Mingxia Liu
Journal:  Med Image Comput Comput Assist Interv       Date:  2022-09-15

2.  Adaptive Multimodal Neuroimage Integration for Major Depression Disorder Detection.

Authors:  Qianqian Wang; Long Li; Lishan Qiao; Mingxia Liu
Journal:  Front Neuroinform       Date:  2022-04-29       Impact factor: 3.739

3.  Deep Learning in Neuroimaging: Overcoming Challenges With Emerging Approaches.

Authors:  Jason Smucny; Ge Shi; Ian Davidson
Journal:  Front Psychiatry       Date:  2022-06-02       Impact factor: 5.435

4.  Performance and Robustness of Regional Image Segmentation Driven by Selected Evolutionary and Genetic Algorithms: Study on MR Articular Cartilage Images.

Authors:  Jan Kubicek; Alice Varysova; Martin Cerny; Kristyna Hancarova; David Oczka; Martin Augustynek; Marek Penhaker; Ondrej Prokop; Radomir Scurek
Journal:  Sensors (Basel)       Date:  2022-08-23       Impact factor: 3.847

5.  Unsupervised Domain Adaptation for Vertebrae Detection and Identification in 3D CT Volumes Using a Domain Sanity Loss.

Authors:  Pascal Sager; Sebastian Salzmann; Felice Burn; Thilo Stadelmann
Journal:  J Imaging       Date:  2022-08-19

6.  Learning coronary artery calcium scoring in coronary CTA from non-contrast CT using unsupervised domain adaptation.

Authors:  Zhiwei Zhai; Sanne G M van Velzen; Nikolas Lessmann; Nils Planken; Tim Leiner; Ivana Išgum
Journal:  Front Cardiovasc Med       Date:  2022-09-12

7.  A domain adaptation benchmark for T1-weighted brain magnetic resonance image segmentation.

Authors:  Parisa Saat; Nikita Nogovitsyn; Muhammad Yusuf Hassan; Muhammad Athar Ganaie; Roberto Souza; Hadi Hemmati
Journal:  Front Neuroinform       Date:  2022-09-23       Impact factor: 3.739

8.  Denoising of pediatric low dose abdominal CT using deep learning based algorithm.

Authors:  Hyoung Suk Park; Kiwan Jeon; JeongEun Lee; Sun Kyoung You
Journal:  PLoS One       Date:  2022-01-21       Impact factor: 3.240

  8 in total

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