| Literature DB >> 34573370 |
Ji Yoon Han1, Joonhong Park2,3.
Abstract
The terminal 14q32 duplication has been reported often in association with other cytogenetic abnormalities, and individuals with this specific duplication showed varying degrees of developmental delay/intellectual disability (DD/ID) and growth retardation (GR), and distinct facial dysmorphisms. Herein, based on the limited cases of terminal duplication of 14q32 known to date, we present new affected siblings presenting with DD/ID, GR, and facial dysmorphism, as well as cerebral infarction caused by recurrent de novo der(14)t(14;14)(p11.2;q32.1) leading to terminal duplication of 14q32. We used coverage analysis generated via duo exome sequencing, performed chromosomal microarray (CMA) as a confirmatory test, and compared our findings with those reported previously. Coverage analysis generated via duo exome sequencing revealed a 17.2 Mb heterozygous duplication at chromosome 14q32.11-q32.33 with a Z ratio ranging between 0.5 and 1 in the proband and her elder brother. As a complementary method, CMA established a terminal duplication described as the arr[hg19]14q32.11q32.33(90,043,558_107,258,824)x3 in the proband and her elder brother; however, the parents and other siblings showed normal karyotyping and no abnormal gain or loss of CMA results. Five candidate genes, BCL11B, CCNK, YY1, DYNC1H1, and PACS2, were associated with the clinical phenotypes in our cases. Although the parents had normal chromosomes, two affected cases carrying terminal duplication of 14q32 can be explained by gonadal mosaicism. Further studies are needed to establish the association between cerebrovascular events and terminal duplication of chromosome 14q32, including investigation into the cytogenetics of patients with precise clinical descriptions.Entities:
Keywords: cerebral infarction; chromosomal microarray; developmental delay; exome sequencing; facial dysmorphism; growth retardation; intellectual disability; terminal 14q32 duplication
Mesh:
Year: 2021 PMID: 34573370 PMCID: PMC8472681 DOI: 10.3390/genes12091388
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.096
Figure 1Pedigree analysis, clinical imaging, and brain magnetic resonance imaging (MRI) and angiography (MRA) in the proband (II-4) and her elder brother (II-3). (A) Pedigree analysis and clinical photography. (Upper panel) Family pedigree shows a recurrent and dominant de novo duplication of 14q32.11-q32.33 in Korean siblings associated with intellectual disability, growth retardation, facial dysmorphism, and cerebral infarction. (Lower panel) A dysmorphic face characterized by frontal bossing, widely spaced teeth, broad upper alveolar ridges, broad mouth, downturned corners of the mouth, broad nasal root, and deep nasal bridge. (B) The proband showed acute infarction in the right striatocapsular region and cortical area of the right temporal lobe (a and b). The proximal M1 segment of right MCA was occluded, and the distal MCA was retrograde filled by leptomeningeal collaterals (c and d). (C) Her elder brother showed abnormal development of the right hemisphere combined with cortical dysplasia (a and b) and dysgenesis of the corpus callosum (c and d).
Figure 2Results of chromosomal analysis in the proband and her family members. Chromosomal analysis revealed 46,XX,der(14)t(14;14)(p11.2;q32.1) in the proband (A) and 46,XY,der(14)t(14;14)(p11.2;q32.1) in her elder brother (B) as indicated by the red arrow, respectively. However, their father (C) and mother (D) showed normal karyotyping.
Figure 3Results of coverage analysis based on duo exome sequencing, and chromosomal microarray in the proband (II-4) and her elder brother (II-3). (A) Copy number analysis using duo exome sequencing revealed 14q32.11-q32.33 duplication in the proband (II-4) and her elder brother (II-3), as highlighted in the red box. (B) Chromosomal microarray established a gain of 17.2 Mb from 14q32.11 to 14qter in the proband (II-4) and her elder brother (II-3). The arr[hg19]14q32.11q32.33(90,043,558_107,258,824)x3 is highlighted in the red box.
Figure 4Literature review of the clinical features and frequencies of 14q duplication in 45 reported cases attributed to translocation, tandem duplication, inversion, or insertion [5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49]. Blue bar, detailed phenotypes of growth and development; green bar, detailed phenotypes of facial dysmorphisms; orange bar, detailed phenotypes of other organ system anomalies; grey bar, detailed phenotypes of other problems; DD, developmental delay; ID, intellectual disability.
Fifteen candidate genes associated with developmental delay located between 14q32 and 14q33.
| DD Genes | Morbidity | Diseases | OMIM | Inheritance |
|---|---|---|---|---|
|
| Yes | Hydrocephalus, congenital, 1 | # 236600 | AR |
|
| Yes | Achondrogenesis, type IA | # 200600 | AR |
|
| Yes | Amelogenesis imperfecta, type IIA5 | # 615887 | AR |
|
| Yes | Dysostosis multiplex, Ain-Naz type | # 619345 | AR |
|
| Yes | Li-Campeau syndrome | # 619189 | AR |
|
| Yes | Pontocerebellar hypoplasia type 1A | # 607596 | AR |
|
| Yes | Intellectual developmental disorder with dysmorphic facies, speech delay, and T-cell abnormalities | # 618092 | AD |
|
| Yes | Intellectual developmental disorder with hypertelorism and distinctive facies | # 618147 | AD |
|
| Yes | Gabriele-de Vries syndrome | # 617557 | AD |
|
| Yes | Mental retardation, autosomal dominant 13 | # 614563 | AD |
|
| Yes | Spastic paraplegia 49, autosomal recessive | # 615031 | AR |
|
| Yes | Mitochondrial complex IV deficiency, nuclear type 17 | # 619061 | AR |
|
| Yes | Cowden syndrome 6 | # 615109 | AD |
|
| Yes | Cerebellofaciodental syndrome | # 616202 | AR |
|
| Yes | Developmental and epileptic encephalopathy 66 | # 618067 | AD |
DD, developmental delay; OMIM, Online Mendelian Inheritance in Man; #, a number sign in OMIM; AR, autosomal recessive; AD, autosomal dominant.
Figure 5Schematic representation of previously reported cases spanning the terminal 17.2 Mb of chromosome 14q32, including ClinGen Dosage Sensitivity Map and Copy Number variation Morbidity Map of Developmental Delay displayed by UCSC Genome Browser (http://genome.ucsc.edu/; accessed on 30 August 2021). Blue bars indicate pathogenic or related gains based on copy number variation morbidity map of developmental delay.