Literature DB >> 34539926

GEOMScope: Large Field-of-view 3D Lensless Microscopy with Low Computational Complexity.

Feng Tian1, Junjie Hu1, Weijian Yang1.   

Abstract

Imaging systems with miniaturized device footprint, real-time processing speed and high resolution three-dimensional (3D) visualization are critical to broad biomedical applications such as endoscopy. Most of existing imaging systems rely on bulky lenses and mechanically refocusing to perform 3D imaging. Here, we demonstrate GEOMScope, a lensless single-shot 3D microscope that forms image through a single layer of thin microlens array and reconstructs objects through an innovative algorithm combining geometrical-optics-based pixel back projection and background suppressions. We verify the effectiveness of GEOMScope on resolution target, fluorescent particles and volumetric objects. Comparing to other widefield lensless imaging devices, we significantly reduce the required computational resource and increase the reconstruction speed by orders of magnitude. This enables us to image and recover large volume 3D object in high resolution with near real-time processing speed. Such a low computational complexity is attributed to the joint design of imaging optics and reconstruction algorithms, and a joint application of geometrical optics and machine learning in the 3D reconstruction. More broadly, the excellent performance of GEOMScope in imaging resolution, volume, and reconstruction speed implicates that geometrical optics could greatly benefit and play an important role in computational imaging.

Entities:  

Keywords:  3D imaging; 3D microscopy; computational imaging; geometrical optics; lensless imaging; light field; microlens array

Year:  2021        PMID: 34539926      PMCID: PMC8445384          DOI: 10.1002/lpor.202100072

Source DB:  PubMed          Journal:  Laser Photon Rev        ISSN: 1863-8880            Impact factor:   10.947


  19 in total

1.  Lensless high-resolution on-chip optofluidic microscopes for Caenorhabditis elegans and cell imaging.

Authors:  Xiquan Cui; Lap Man Lee; Xin Heng; Weiwei Zhong; Paul W Sternberg; Demetri Psaltis; Changhuei Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-28       Impact factor: 11.205

2.  Wave optics theory and 3-D deconvolution for the light field microscope.

Authors:  Michael Broxton; Logan Grosenick; Samuel Yang; Noy Cohen; Aaron Andalman; Karl Deisseroth; Marc Levoy
Journal:  Opt Express       Date:  2013-10-21       Impact factor: 3.894

3.  Fast, volumetric live-cell imaging using high-resolution light-field microscopy.

Authors:  Haoyu Li; Changliang Guo; Deborah Kim-Holzapfel; Weiyi Li; Yelena Altshuller; Bryce Schroeder; Wenhao Liu; Yizhi Meng; Jarrod B French; Ken-Ichi Takamaru; Michael A Frohman; Shu Jia
Journal:  Biomed Opt Express       Date:  2018-12-04       Impact factor: 3.732

4.  Deconvolving images with unknown boundaries using the alternating direction method of multipliers.

Authors:  Mariana S C Almeida; Mario Figueiredo
Journal:  IEEE Trans Image Process       Date:  2013-04-16       Impact factor: 10.856

Review 5.  Lensless Imaging and Sensing.

Authors:  Aydogan Ozcan; Euan McLeod
Journal:  Annu Rev Biomed Eng       Date:  2016-01-25       Impact factor: 9.590

6.  On-chip fluorescence microscopy with a random microlens diffuser.

Authors:  Grace Kuo; Fanglin Linda Liu; Irene Grossrubatscher; Ren Ng; Laura Waller
Journal:  Opt Express       Date:  2020-03-16       Impact factor: 3.894

7.  Design of a high-resolution light field miniscope for volumetric imaging in scattering tissue.

Authors:  Yanqin Chen; Bo Xiong; Yujia Xue; Xin Jin; Joseph Greene; Lei Tian
Journal:  Biomed Opt Express       Date:  2020-02-28       Impact factor: 3.732

8.  Fourier light-field microscopy.

Authors:  Changliang Guo; Wenhao Liu; Xuanwen Hua; Haoyu Li; Shu Jia
Journal:  Opt Express       Date:  2019-09-02       Impact factor: 3.894

9.  Single-shot 3D wide-field fluorescence imaging with a Computational Miniature Mesoscope.

Authors:  Yujia Xue; Ian G Davison; David A Boas; Lei Tian
Journal:  Sci Adv       Date:  2020-10-21       Impact factor: 14.136

10.  Miniscope3D: optimized single-shot miniature 3D fluorescence microscopy.

Authors:  Kyrollos Yanny; Nick Antipa; William Liberti; Sam Dehaeck; Kristina Monakhova; Fanglin Linda Liu; Konlin Shen; Ren Ng; Laura Waller
Journal:  Light Sci Appl       Date:  2020-10-02       Impact factor: 17.782

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  1 in total

1.  Neurophotonic tools for microscopic measurements and manipulation: status report.

Authors:  Ahmed S Abdelfattah; Sapna Ahuja; Taner Akkin; Srinivasa Rao Allu; Joshua Brake; David A Boas; Erin M Buckley; Robert E Campbell; Anderson I Chen; Xiaojun Cheng; Tomáš Čižmár; Irene Costantini; Massimo De Vittorio; Anna Devor; Patrick R Doran; Mirna El Khatib; Valentina Emiliani; Natalie Fomin-Thunemann; Yeshaiahu Fainman; Tomas Fernandez-Alfonso; Christopher G L Ferri; Ariel Gilad; Xue Han; Andrew Harris; Elizabeth M C Hillman; Ute Hochgeschwender; Matthew G Holt; Na Ji; Kıvılcım Kılıç; Evelyn M R Lake; Lei Li; Tianqi Li; Philipp Mächler; Evan W Miller; Rickson C Mesquita; K M Naga Srinivas Nadella; U Valentin Nägerl; Yusuke Nasu; Axel Nimmerjahn; Petra Ondráčková; Francesco S Pavone; Citlali Perez Campos; Darcy S Peterka; Filippo Pisano; Ferruccio Pisanello; Francesca Puppo; Bernardo L Sabatini; Sanaz Sadegh; Sava Sakadzic; Shy Shoham; Sanaya N Shroff; R Angus Silver; Ruth R Sims; Spencer L Smith; Vivek J Srinivasan; Martin Thunemann; Lei Tian; Lin Tian; Thomas Troxler; Antoine Valera; Alipasha Vaziri; Sergei A Vinogradov; Flavia Vitale; Lihong V Wang; Hana Uhlířová; Chris Xu; Changhuei Yang; Mu-Han Yang; Gary Yellen; Ofer Yizhar; Yongxin Zhao
Journal:  Neurophotonics       Date:  2022-04-27       Impact factor: 4.212

  1 in total

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