Literature DB >> 34532522

Microtitre Plate Based Cell-SELEX Method.

Munish Shorie1, Harmanjit Kaur1.   

Abstract

Aptamers have emerged as a novel category in the field of bioreceptors due to their wide applications ranging from biosensing to therapeutics. Several variations of their screening process, called SELEX have been reported which can yield sequences with desired properties needed for their final use. We report a facile microtiter plate-based Cell-SELEX method for a gram-negative bacteria E. coli. The optimized protocol allows the reduction of number of rounds for SELEX by offering higher surface area and longer retention times. In addition, this protocol can be modified for other prokaryotic and eukaryotic cells, and glycan moieties as target for generation of high affinity bio-receptors in a short course of time in-vitro.
Copyright © 2018 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Aptamers; Bacteria; E. coli; Gram negative bacteria; Microbial detection; SELEX; bio-receptor screening

Year:  2018        PMID: 34532522      PMCID: PMC8342047          DOI: 10.21769/BioProtoc.3051

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  7 in total

1.  Development of DNA aptamers using Cell-SELEX.

Authors:  Kwame Sefah; Dihua Shangguan; Xiangling Xiong; Meghan B O'Donoghue; Weihong Tan
Journal:  Nat Protoc       Date:  2010-06-03       Impact factor: 13.491

2.  Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase.

Authors:  C Tuerk; L Gold
Journal:  Science       Date:  1990-08-03       Impact factor: 47.728

3.  In vitro selection of RNA molecules that bind specific ligands.

Authors:  A D Ellington; J W Szostak
Journal:  Nature       Date:  1990-08-30       Impact factor: 49.962

4.  Nanobioprobe mediated DNA aptamers for explosive detection.

Authors:  Munish Shorie; Vijayender Bhalla; Preeti Pathania; C Raman Suri
Journal:  Chem Commun (Camb)       Date:  2014-02-04       Impact factor: 6.222

5.  Bridged Rebar Graphene functionalized aptasensor for pathogenic E. coli O78:K80:H11 detection.

Authors:  Harmanjit Kaur; Munish Shorie; Manju Sharma; Ashok K Ganguli; Priyanka Sabherwal
Journal:  Biosens Bioelectron       Date:  2017-07-05       Impact factor: 10.618

6.  Isolation and characterization of DNA aptamers against Escherichia coli using a bacterial cell-systematic evolution of ligands by exponential enrichment approach.

Authors:  Yeon Seok Kim; Min Young Song; Jongsoo Jurng; Byoung Chan Kim
Journal:  Anal Biochem       Date:  2013-01-26       Impact factor: 3.365

7.  Bacterial growth, detachment and cell size control on polyethylene terephthalate surfaces.

Authors:  Liyun Wang; Daming Fan; Wei Chen; Eugene M Terentjev
Journal:  Sci Rep       Date:  2015-10-14       Impact factor: 4.379

  7 in total

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