Literature DB >> 34520722

Structure of mitotic chromosomes.

Andrew J Beel1, Maia Azubel2, Pierre-Jean Matteï1, Roger D Kornberg1.   

Abstract

Chromatin fibers must fold or coil in the process of chromosome condensation. Patterns of coiling have been demonstrated for reconstituted chromatin, but the actual trajectories of fibers in condensed states of chromosomes could not be visualized because of the high density of the material. We have exploited partial decondensation of mitotic chromosomes to reveal their internal structure at sub-nucleosomal resolution by cryo-electron tomography, without the use of stains, fixatives, milling, or sectioning. DNA gyres around nucleosomes were visible, allowing the nucleosomes to be identified and their orientations to be determined. Linker DNA regions were traced, revealing the trajectories of the chromatin fibers. The trajectories were irregular, with almost no evidence of coiling and no short- or long-range order of the chromosomal material. The 146-bp core particle, long known as a product of nuclease digestion, is identified as the native state of the nucleosome, with no regular spacing along the chromatin fibers.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  chromatin fibers; chromosome condensation; cryo-electron tomography; mitotic chromosomes

Mesh:

Substances:

Year:  2021        PMID: 34520722      PMCID: PMC8571045          DOI: 10.1016/j.molcel.2021.08.020

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  36 in total

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Authors:  Benedetta Dorigo; Thomas Schalch; Alexandra Kulangara; Sylwia Duda; Rasmus R Schroeder; Timothy J Richmond
Journal:  Science       Date:  2004-11-26       Impact factor: 47.728

2.  Automated electron microscope tomography using robust prediction of specimen movements.

Authors:  David N Mastronarde
Journal:  J Struct Biol       Date:  2005-10       Impact factor: 2.867

3.  Structure and Dynamics of a 197 bp Nucleosome in Complex with Linker Histone H1.

Authors:  Jan Bednar; Isabel Garcia-Saez; Ramachandran Boopathi; Amber R Cutter; Gabor Papai; Anna Reymer; Sajad H Syed; Imtiaz Nisar Lone; Ognyan Tonchev; Corinne Crucifix; Hervé Menoni; Christophe Papin; Dimitrios A Skoufias; Hitoshi Kurumizaka; Richard Lavery; Ali Hamiche; Jeffrey J Hayes; Patrick Schultz; Dimitar Angelov; Carlo Petosa; Stefan Dimitrov
Journal:  Mol Cell       Date:  2017-05-04       Impact factor: 17.970

4.  Cryo-EM study of the chromatin fiber reveals a double helix twisted by tetranucleosomal units.

Authors:  Feng Song; Ping Chen; Dapeng Sun; Mingzhu Wang; Liping Dong; Dan Liang; Rui-Ming Xu; Ping Zhu; Guohong Li
Journal:  Science       Date:  2014-04-25       Impact factor: 47.728

5.  Multi-scale 3D Cryo-Correlative Microscopy for Vitrified Cells.

Authors:  Gong-Her Wu; Patrick G Mitchell; Jesus G Galaz-Montoya; Corey W Hecksel; Emily M Sontag; Vimal Gangadharan; Jeffrey Marshman; David Mankus; Margaret E Bisher; Abigail K R Lytton-Jean; Judith Frydman; Kirk Czymmek; Wah Chiu
Journal:  Structure       Date:  2020-08-18       Impact factor: 5.006

6.  Human mitotic chromosomes consist predominantly of irregularly folded nucleosome fibres without a 30-nm chromatin structure.

Authors:  Yoshinori Nishino; Mikhail Eltsov; Yasumasa Joti; Kazuki Ito; Hideaki Takata; Yukio Takahashi; Saera Hihara; Achilleas S Frangakis; Naoko Imamoto; Tetsuya Ishikawa; Kazuhiro Maeshima
Journal:  EMBO J       Date:  2012-02-17       Impact factor: 11.598

7.  Cryo-ET reveals the macromolecular reorganization of S. pombe mitotic chromosomes in vivo.

Authors:  Shujun Cai; Chen Chen; Zhi Yang Tan; Yinyi Huang; Jian Shi; Lu Gan
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-08       Impact factor: 11.205

8.  DNA density in mitotic and meiotic metaphase chromosomes of plants and animals.

Authors:  M D Bennett; J S Heslop-Harrison; J B Smith; J P Ward
Journal:  J Cell Sci       Date:  1983-09       Impact factor: 5.285

9.  A three-dimensional approach to mitotic chromosome structure: evidence for a complex hierarchical organization.

Authors:  A S Belmont; J W Sedat; D A Agard
Journal:  J Cell Biol       Date:  1987-07       Impact factor: 10.539

10.  3.9 Å structure of the nucleosome core particle determined by phase-plate cryo-EM.

Authors:  Eugene Y D Chua; Vinod K Vogirala; Oviya Inian; Andrew S W Wong; Lars Nordenskiöld; Juergen M Plitzko; Radostin Danev; Sara Sandin
Journal:  Nucleic Acids Res       Date:  2016-08-25       Impact factor: 16.971

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  2 in total

1.  Reconstituted TAD-size chromatin fibers feature heterogeneous nucleosome clusters.

Authors:  Nikolay Korolev; Anatoly Zinchenko; Aghil Soman; Qinming Chen; Sook Yi Wong; Nikolay V Berezhnoy; Rajib Basak; Johan R C van der Maarel; John van Noort; Lars Nordenskiöld
Journal:  Sci Rep       Date:  2022-09-16       Impact factor: 4.996

2.  Chromatin Liquid-Liquid Phase Separation (LLPS) Is Regulated by Ionic Conditions and Fiber Length.

Authors:  Qinming Chen; Lei Zhao; Aghil Soman; Anastasia Yu Arkhipova; Jindi Li; Hao Li; Yinglu Chen; Xiangyan Shi; Lars Nordenskiöld
Journal:  Cells       Date:  2022-10-06       Impact factor: 7.666

  2 in total

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