Literature DB >> 34498163

CRISPR/Cas9 technology for improving agronomic traits and future prospective in agriculture.

Muhammad Junaid Rao1,2,3, Lingqiang Wang4,5.   

Abstract

MAIN
CONCLUSION: In this review, we have focused on the CRISPR/Cas9 technology for improving the agronomic traits in plants through point mutations, knockout, and single base editing, and we highlighted the recent progress in plant metabolic engineering. CRISPR/Cas9 technology has immense power to reproduce plants with desired characters and revolutionizing the field of genome engineering by erasing the barriers in targeted genome editing. Agriculture fields are using this advance genome editing tool to get the desired traits in the crops plants such as increase yield, improve product quality attributes, and enhance resistance against biotic and abiotic stresses by identifying and editing genes of interest. This review focuses on CRISPR/Cas-based gene knockout for trait improvement and single base editing to boost yield, quality, stress tolerance, and disease resistance traits in crops. Use of CRISPR/Cas9 system to facilitate crop domestication and hybrid breeding are also touched. We summarize recent developments and up-gradation of delivery mechanism (nanotechnology and virus particle-based delivery system) and progress in multiplex gene editing. We also shed lights in advances and challenges of engineering the important metabolic pathways that contain a variety of dietary metabolites and phytochemicals. In addition, we endorsed substantial technical hurdles and possible ways to overcome the unpredictability of CRISPR/Cas technology for broader application across various crop species. We speculated that by making a strong interconnection among all genomic fields will give a gigantic bunt of knowledge to develop crop expressing desired traits.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Agronomic traits; CRISPR/Cas9; Genome editing; Metabolic engineering; Metabolites

Mesh:

Year:  2021        PMID: 34498163     DOI: 10.1007/s00425-021-03716-y

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  119 in total

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Authors:  Melvin D Bolton
Journal:  Mol Plant Microbe Interact       Date:  2009-05       Impact factor: 4.171

Review 2.  Editing plant genomes with CRISPR/Cas9.

Authors:  Khaoula Belhaj; Angela Chaparro-Garcia; Sophien Kamoun; Nicola J Patron; Vladimir Nekrasov
Journal:  Curr Opin Biotechnol       Date:  2014-11-29       Impact factor: 9.740

Review 3.  The CRISPR/Cas9 system for plant genome editing and beyond.

Authors:  Luisa Bortesi; Rainer Fischer
Journal:  Biotechnol Adv       Date:  2014-12-20       Impact factor: 14.227

4.  Secondary metabolites in plant defence mechanisms.

Authors:  Richard N Bennett; Roger M Wallsgrove
Journal:  New Phytol       Date:  1994-08       Impact factor: 10.151

5.  Efficient gene editing in tomato in the first generation using the clustered regularly interspaced short palindromic repeats/CRISPR-associated9 system.

Authors:  Christopher Brooks; Vladimir Nekrasov; Zachary B Lippman; Joyce Van Eck
Journal:  Plant Physiol       Date:  2014-09-15       Impact factor: 8.340

6.  DNA replicons for plant genome engineering.

Authors:  Nicholas J Baltes; Javier Gil-Humanes; Tomas Cermak; Paul A Atkins; Daniel F Voytas
Journal:  Plant Cell       Date:  2014-01-17       Impact factor: 11.277

7.  CRISPR-Cas9 Targeted Mutagenesis Leads to Simultaneous Modification of Different Homoeologous Gene Copies in Polyploid Oilseed Rape (Brassica napus).

Authors:  Janina Braatz; Hans-Joachim Harloff; Martin Mascher; Nils Stein; Axel Himmelbach; Christian Jung
Journal:  Plant Physiol       Date:  2017-04-18       Impact factor: 8.340

8.  Multilevel analysis of primary metabolism provides new insights into the role of potassium nutrition for glycolysis and nitrogen assimilation in Arabidopsis roots.

Authors:  Patrick Armengaud; Ronan Sulpice; Anthony J Miller; Mark Stitt; Anna Amtmann; Yves Gibon
Journal:  Plant Physiol       Date:  2009-04-03       Impact factor: 8.340

9.  Manipulating the Biosynthesis of Bioactive Compound Alkaloids for Next-Generation Metabolic Engineering in Opium Poppy Using CRISPR-Cas 9 Genome Editing Technology.

Authors:  Yagiz Alagoz; Tugba Gurkok; Baohong Zhang; Turgay Unver
Journal:  Sci Rep       Date:  2016-08-03       Impact factor: 4.379

10.  Efficient targeted multiallelic mutagenesis in tetraploid potato (Solanum tuberosum) by transient CRISPR-Cas9 expression in protoplasts.

Authors:  Mariette Andersson; Helle Turesson; Alessandro Nicolia; Ann-Sofie Fält; Mathias Samuelsson; Per Hofvander
Journal:  Plant Cell Rep       Date:  2016-10-03       Impact factor: 4.570

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Authors:  Yanjun Li; Dan Tang; Zongrang Liu; Jianjun Chen; Baoping Cheng; Rahul Kumar; Huseyin Yer; Yi Li
Journal:  Plants (Basel)       Date:  2022-05-30

Review 2.  CRISPR/Cas9 in Planta Hairy Root Transformation: A Powerful Platform for Functional Analysis of Root Traits in Soybean.

Authors:  Mohsen Niazian; François Belzile; Davoud Torkamaneh
Journal:  Plants (Basel)       Date:  2022-04-12

Review 3.  Functional Studies of Plant Latex as a Rich Source of Bioactive Compounds: Focus on Proteins and Alkaloids.

Authors:  Joanna Gracz-Bernaciak; Oliwia Mazur; Robert Nawrot
Journal:  Int J Mol Sci       Date:  2021-11-17       Impact factor: 5.923

Review 4.  Antioxidant Metabolites in Primitive, Wild, and Cultivated Citrus and Their Role in Stress Tolerance.

Authors:  Muhammad Junaid Rao; Songguo Wu; Mingzheng Duan; Lingqiang Wang
Journal:  Molecules       Date:  2021-09-24       Impact factor: 4.411

Review 5.  Molecular signatures between citrus and Candidatus Liberibacter asiaticus.

Authors:  Bin Hu; Muhammad Junaid Rao; Xiuxin Deng; Sheo Shankar Pandey; Connor Hendrich; Fang Ding; Nian Wang; Qiang Xu
Journal:  PLoS Pathog       Date:  2021-12-09       Impact factor: 6.823

6.  Transcriptomic and Widely Targeted Metabolomic Approach Identified Diverse Group of Bioactive Compounds, Antiradical Activities, and Their Associated Genes in Six Sugarcane Varieties.

Authors:  Muhammad Junaid Rao; Mingzheng Duan; Jihong Wang; Shijian Han; Li Ma; Xinyi Mo; Min Li; Lihua Hu; Lingqiang Wang
Journal:  Antioxidants (Basel)       Date:  2022-07-04

Review 7.  Genetic manipulation for abiotic stress resistance traits in crops.

Authors:  Nardana Esmaeili; Guoxin Shen; Hong Zhang
Journal:  Front Plant Sci       Date:  2022-09-21       Impact factor: 6.627

Review 8.  Entailing the Next-Generation Sequencing and Metabolome for Sustainable Agriculture by Improving Plant Tolerance.

Authors:  Muhammad Furqan Ashraf; Dan Hou; Quaid Hussain; Muhammad Imran; Jialong Pei; Mohsin Ali; Aamar Shehzad; Muhammad Anwar; Ali Noman; Muhammad Waseem; Xinchun Lin
Journal:  Int J Mol Sci       Date:  2022-01-07       Impact factor: 5.923

  8 in total

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