Literature DB >> 34490781

In Situ Covalent Functionalization of DNA Origami Virus-like Particles.

Grant A Knappe1,2, Eike-Christian Wamhoff1, Benjamin J Read3, Darrell J Irvine1,3,4,5,6, Mark Bathe1.   

Abstract

DNA origami is a powerful nanomaterial for biomedical applications due in part to its capacity for programmable, site-specific functionalization. To realize these applications, scalable and efficient conjugation protocols are needed for diverse moieties ranging from small molecules to biomacromolecules. Currently, there are no facile and general methods for in situ covalent modification and label-free quantification of reaction conversion. Here, we investigate the postassembly functionalization of DNA origami and the subsequent high-performance liquid chromatography-based characterization of these nanomaterials. Following this approach, we developed a versatile DNA origami functionalization and characterization platform. We observed quantitative in situ conversion using widely accessible click chemistry for carbohydrates, small molecules, peptides, polymers, and proteins. This platform should provide broader access to covalently functionalized DNA origami, as illustrated here by PEGylation for passivation and HIV antigen decoration to construct virus-like particle vaccines.

Entities:  

Keywords:  DNA nanotechnology; DNA origami; bioconjugation; click chemistry; nanoparticles; reaction characterization

Mesh:

Substances:

Year:  2021        PMID: 34490781      PMCID: PMC8628367          DOI: 10.1021/acsnano.1c03158

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   18.027


  54 in total

1.  Orthogonal protein decoration of DNA origami.

Authors:  Barbara Saccà; Rebecca Meyer; Michael Erkelenz; Kathrin Kiko; Andreas Arndt; Hendrik Schroeder; Kersten S Rabe; Christof M Niemeyer
Journal:  Angew Chem Int Ed Engl       Date:  2010-12-03       Impact factor: 15.336

2.  Hierarchical assembly of metal nanoparticles, quantum dots and organic dyes using DNA origami scaffolds.

Authors:  Robert Schreiber; Jaekwon Do; Eva-Maria Roller; Tao Zhang; Verena J Schüller; Philipp C Nickels; Jochen Feldmann; Tim Liedl
Journal:  Nat Nanotechnol       Date:  2013-12-01       Impact factor: 39.213

3.  Complex wireframe DNA origami nanostructures with multi-arm junction vertices.

Authors:  Fei Zhang; Shuoxing Jiang; Siyu Wu; Yulin Li; Chengde Mao; Yan Liu; Hao Yan
Journal:  Nat Nanotechnol       Date:  2015-07-20       Impact factor: 39.213

4.  DNA rendering of polyhedral meshes at the nanoscale.

Authors:  Erik Benson; Abdulmelik Mohammed; Johan Gardell; Sergej Masich; Eugen Czeizler; Pekka Orponen; Björn Högberg
Journal:  Nature       Date:  2015-07-23       Impact factor: 49.962

Review 5.  DNA Origami: Scaffolds for Creating Higher Order Structures.

Authors:  Fan Hong; Fei Zhang; Yan Liu; Hao Yan
Journal:  Chem Rev       Date:  2017-06-12       Impact factor: 60.622

6.  Analyzing DNA Nanotechnology: A Call to Arms For The Analytical Chemistry Community.

Authors:  Divita Mathur; Igor L Medintz
Journal:  Anal Chem       Date:  2017-02-16       Impact factor: 6.986

7.  Functional patterning of DNA origami by parallel enzymatic modification.

Authors:  Kasper Jahn; Thomas Tørring; Niels Vinther Voigt; Rasmus Schøler Sørensen; Anne Louise Bank Kodal; Ebbe Sloth Andersen; Kurt Vesterager Gothelf; Jørgen Kjems
Journal:  Bioconjug Chem       Date:  2011-03-17       Impact factor: 4.774

8.  Interenzyme substrate diffusion for an enzyme cascade organized on spatially addressable DNA nanostructures.

Authors:  Jinglin Fu; Minghui Liu; Yan Liu; Neal W Woodbury; Hao Yan
Journal:  J Am Chem Soc       Date:  2012-03-16       Impact factor: 15.419

9.  Hierarchical Assembly of Nucleic Acid/Coiled-Coil Peptide Nanostructures.

Authors:  Alex Buchberger; Chad R Simmons; Nour Eddine Fahmi; Ronit Freeman; Nicholas Stephanopoulos
Journal:  J Am Chem Soc       Date:  2020-01-05       Impact factor: 15.419

10.  Control of enzyme reactions by a reconfigurable DNA nanovault.

Authors:  Guido Grossi; Mette Dalgaard Ebbesen Jepsen; Jørgen Kjems; Ebbe Sloth Andersen
Journal:  Nat Commun       Date:  2017-10-19       Impact factor: 14.919

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  5 in total

1.  Spatially Patterned Neutralizing Icosahedral DNA Nanocage for Efficient SARS-CoV-2 Blocking.

Authors:  Jialu Zhang; Yunyun Xu; Yihao Huang; Miao Sun; Siwen Liu; Shuang Wan; Honglin Chen; Chaoyong Yang; Yang Yang; Yanling Song
Journal:  J Am Chem Soc       Date:  2022-06-30       Impact factor: 16.383

2.  Anion-specific structure and stability of guanidinium-bound DNA origami.

Authors:  Marcel Hanke; Daniel Dornbusch; Christoph Hadlich; Andre Rossberg; Niklas Hansen; Guido Grundmeier; Satoru Tsushima; Adrian Keller; Karim Fahmy
Journal:  Comput Struct Biotechnol J       Date:  2022-05-23       Impact factor: 6.155

Review 3.  Critical review of nucleic acid nanotechnology to identify gaps and inform a strategy for accelerated clinical translation.

Authors:  Kirill A Afonin; Marina A Dobrovolskaia; Weina Ke; Piotr Grodzinski; Mark Bathe
Journal:  Adv Drug Deliv Rev       Date:  2021-12-13       Impact factor: 17.873

Review 4.  Aptamers as promising nanotheranostic tools in the COVID-19 pandemic era.

Authors:  Christian K O Dzuvor; Ebenezer Larteh Tettey; Michael K Danquah
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2022-03-03

5.  Enhancing antibody responses by multivalent antigen display on thymus-independent DNA origami scaffolds.

Authors:  Eike-Christian Wamhoff; Larance Ronsard; Jared Feldman; Blake M Hauser; Grant A Knappe; Anna Romanov; Evan Lam; Kerri St Denis; Alejandro B Balazs; Aaron Schmidt; Daniel Lingwood; Mark Bathe
Journal:  bioRxiv       Date:  2022-08-24
  5 in total

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