Literature DB >> 34481360

Break-induced replication mechanisms in yeast and mammals.

Xiaohua Wu1, Anna Malkova2.   

Abstract

Break-induced replication (BIR) is a pathway specialized in repair of double-strand DNA breaks with only one end capable of invading homologous template that can arise following replication collapse, telomere erosion or DNA cutting by site-specific endonucleases. For a long time, yeast remained the only model system to study BIR. Studies in yeast demonstrated that BIR represents an unusual mode of DNA synthesis that is driven by a migrating bubble and leads to conservative inheritance of newly synthesized DNA. This unusual type of DNA synthesis leads to high levels of mutations and chromosome rearrangements. Recently, multiple examples of BIR were uncovered in mammalian cells that allowed the comparison of BIR between organisms. It appeared initially that BIR in mammalian cells is predominantly independent of RAD51, and therefore different from BIR that is predominantly Rad51-dependent in yeast. However, a series of systematic studies utilizing site-specific DNA breaks for BIR initiation in mammalian reporters led to the discovery of highly efficient RAD51-dependent BIR, allowing side-by side comparison with BIR in yeast which is the focus of this review. Published by Elsevier Ltd.

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Year:  2021        PMID: 34481360      PMCID: PMC9109633          DOI: 10.1016/j.gde.2021.08.002

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   4.665


  69 in total

1.  Who's who in human recombination: BRCA2 and RAD52.

Authors:  Jie Liu; Wolf-Dietrich Heyer
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-28       Impact factor: 11.205

2.  DNA REPAIR. Mus81 and converging forks limit the mutagenicity of replication fork breakage.

Authors:  Ryan Mayle; Ian M Campbell; Christine R Beck; Yang Yu; Marenda Wilson; Chad A Shaw; Lotte Bjergbaek; James R Lupski; Grzegorz Ira
Journal:  Science       Date:  2015-08-14       Impact factor: 47.728

Review 3.  Break-induced replication: what is it and what is it for?

Authors:  Bertrand Llorente; Catherine E Smith; Lorraine S Symington
Journal:  Cell Cycle       Date:  2008-01-14       Impact factor: 4.534

Review 4.  Break induced replication in eukaryotes: mechanisms, functions, and consequences.

Authors:  Cynthia J Sakofsky; Anna Malkova
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-04-21       Impact factor: 8.250

5.  RAD52 Facilitates Mitotic DNA Synthesis Following Replication Stress.

Authors:  Rahul Bhowmick; Sheroy Minocherhomji; Ian D Hickson
Journal:  Mol Cell       Date:  2016-12-15       Impact factor: 17.970

6.  Clustered mutations in yeast and in human cancers can arise from damaged long single-strand DNA regions.

Authors:  Steven A Roberts; Joan Sterling; Cole Thompson; Shawn Harris; Deepak Mav; Ruchir Shah; Leszek J Klimczak; Gregory V Kryukov; Ewa Malc; Piotr A Mieczkowski; Michael A Resnick; Dmitry A Gordenin
Journal:  Mol Cell       Date:  2012-05-17       Impact factor: 17.970

7.  Defective resection at DNA double-strand breaks leads to de novo telomere formation and enhances gene targeting.

Authors:  Woo-Hyun Chung; Zhu Zhu; Alma Papusha; Anna Malkova; Grzegorz Ira
Journal:  PLoS Genet       Date:  2010-05-13       Impact factor: 5.917

8.  DNA Polymerase Delta Synthesizes Both Strands during Break-Induced Replication.

Authors:  Roberto A Donnianni; Zhi-Xiong Zhou; Scott A Lujan; Amr Al-Zain; Valerie Garcia; Eleanor Glancy; Adam B Burkholder; Thomas A Kunkel; Lorraine S Symington
Journal:  Mol Cell       Date:  2019-09-05       Impact factor: 17.970

9.  Large inverted repeats in the vicinity of a single double-strand break strongly affect repair in yeast diploids lacking Rad51.

Authors:  Brandon Downing; Rachel Morgan; Kelly VanHulle; Angela Deem; Anna Malkova
Journal:  Mutat Res       Date:  2008-08-05       Impact factor: 2.433

Review 10.  A microhomology-mediated break-induced replication model for the origin of human copy number variation.

Authors:  P J Hastings; Grzegorz Ira; James R Lupski
Journal:  PLoS Genet       Date:  2009-01-30       Impact factor: 5.917

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  4 in total

1.  The convergence of head-on DNA unwinding forks induces helicase oligomerization and activity transition.

Authors:  Lulu Bi; Zhenheng Qin; Teng Wang; Yanan Li; Xinshuo Jia; Xia Zhang; Xi-Miao Hou; Mauro Modesti; Xu-Guang Xi; Bo Sun
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-03       Impact factor: 12.779

Review 2.  Break-induced replication: unraveling each step.

Authors:  Liping Liu; Anna Malkova
Journal:  Trends Genet       Date:  2022-04-19       Impact factor: 11.821

3.  Ribodysgenesis: sudden genome instability in the yeast Saccharomyces cerevisiae arising from RNase H2 cleavage at genomic-embedded ribonucleotides.

Authors:  Yang Sui; Anastasiya Epstein; Margaret Dominska; Dao-Qiong Zheng; Thomas D Petes; Hannah L Klein
Journal:  Nucleic Acids Res       Date:  2022-06-24       Impact factor: 19.160

4.  DNA nicks induce mutational signatures associated with BRCA1 deficiency.

Authors:  Yi-Li Feng; Qian Liu; Ruo-Dan Chen; Si-Cheng Liu; Zhi-Cheng Huang; Kun-Ming Liu; Xiao-Ying Yang; An-Yong Xie
Journal:  Nat Commun       Date:  2022-07-25       Impact factor: 17.694

  4 in total

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