Literature DB >> 35658074

The convergence of head-on DNA unwinding forks induces helicase oligomerization and activity transition.

Lulu Bi1, Zhenheng Qin1,2,3, Teng Wang1, Yanan Li1, Xinshuo Jia1, Xia Zhang1, Xi-Miao Hou4, Mauro Modesti5, Xu-Guang Xi6, Bo Sun1.   

Abstract

Helicases are multifunctional motor proteins with the primary task of separating nucleic acid duplexes. These enzymes often exist in distinct oligomeric forms and play essential roles during nucleic acid metabolism. Whether there is a correlation between their oligomeric state and cellular function, and how helicases effectively perform functional switching remains enigmatic. Here, we address these questions using a combined single-molecule approach and Bloom syndrome helicase (BLM). By examining the head-on collision of two BLM-mediated DNA unwinding forks, we find that two groups of BLM, upon fork convergence, promptly oligomerize across the fork junctions and tightly bridge two independent single-stranded (ss) DNA molecules that were newly generated by the unwinding BLMs. This protein oligomerization is mediated by the helicase and RNase D C-terminal (HRDC) domain of BLM and can sustain a disruptive force of up to 300 pN. Strikingly, onsite BLM oligomerization gives rise to an immediate transition of their helicase activities, from unwinding dsDNA to translocating along ssDNA at exceedingly fast rates, thus allowing for the efficient displacement of ssDNA-binding proteins, such as RPA and RAD51. These findings uncover an activity transition pathway for helicases and help to explain how BLM plays both pro- and anti-recombination roles in the maintenance of genome stability.

Entities:  

Keywords:  BLM; SSB; helicase; oligomerization; single molecule

Mesh:

Substances:

Year:  2022        PMID: 35658074      PMCID: PMC9191346          DOI: 10.1073/pnas.2116462119

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


  52 in total

Review 1.  Structure and function of hexameric helicases.

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Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

Review 2.  SF1 and SF2 helicases: family matters.

Authors:  Margaret E Fairman-Williams; Ulf-Peter Guenther; Eckhard Jankowsky
Journal:  Curr Opin Struct Biol       Date:  2010-04-22       Impact factor: 6.809

Review 3.  The power of two: protein dimerization in biology.

Authors:  Neelan J Marianayagam; Margaret Sunde; Jacqueline M Matthews
Journal:  Trends Biochem Sci       Date:  2004-11       Impact factor: 13.807

4.  Single-molecule studies reveal dynamics of DNA unwinding by the ring-shaped T7 helicase.

Authors:  Daniel S Johnson; Lu Bai; Benjamin Y Smith; Smita S Patel; Michelle D Wang
Journal:  Cell       Date:  2007-06-29       Impact factor: 41.582

Review 5.  Structure and mechanism of helicases and nucleic acid translocases.

Authors:  Martin R Singleton; Mark S Dillingham; Dale B Wigley
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

6.  A helical bundle in the N-terminal domain of the BLM helicase mediates dimer and potentially hexamer formation.

Authors:  Jing Shi; Wei-Fei Chen; Bo Zhang; San-Hong Fan; Xia Ai; Na-Nv Liu; Stephane Rety; Xu-Guang Xi
Journal:  J Biol Chem       Date:  2017-02-22       Impact factor: 5.157

Review 7.  RNA helicase proteins as chaperones and remodelers.

Authors:  Inga Jarmoskaite; Rick Russell
Journal:  Annu Rev Biochem       Date:  2014-03-12       Impact factor: 23.643

Review 8.  Different mechanisms for translocation by monomeric and hexameric helicases.

Authors:  Yang Gao; Wei Yang
Journal:  Curr Opin Struct Biol       Date:  2019-11-26       Impact factor: 6.809

9.  Evidence for a functional dimeric form of the PcrA helicase in DNA unwinding.

Authors:  Ye Yang; Shuo-Xing Dou; Hua Ren; Peng-Ye Wang; Xing-Dong Zhang; Min Qian; Bing-Yi Pan; Xu Guang Xi
Journal:  Nucleic Acids Res       Date:  2008-02-14       Impact factor: 16.971

10.  Dynamics of Staphylococcus aureus Cas9 in DNA target Association and Dissociation.

Authors:  Siqi Zhang; Qian Zhang; Xi-Miao Hou; Lijuan Guo; Fangzhu Wang; Lulu Bi; Xia Zhang; Hai-Hong Li; Fengcai Wen; Xu-Guang Xi; Xingxu Huang; Bin Shen; Bo Sun
Journal:  EMBO Rep       Date:  2020-08-13       Impact factor: 8.807

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  1 in total

1.  Stochastically multimerized ParB orchestrates DNA assembly as unveiled by single-molecule analysis.

Authors:  Lijuan Guo; Yilin Zhao; Qian Zhang; Ying Feng; Lulu Bi; Xia Zhang; Teng Wang; Cong Liu; Hanhui Ma; Bo Sun
Journal:  Nucleic Acids Res       Date:  2022-09-09       Impact factor: 19.160

  1 in total

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