Literature DB >> 34471289

Structure of Geobacter pili reveals secretory rather than nanowire behaviour.

Yangqi Gu1,2, Vishok Srikanth1,3, Aldo I Salazar-Morales1,3, Ruchi Jain1,3, J Patrick O'Brien1,3, Sophia M Yi1,3, Rajesh Kumar Soni4, Fadel A Samatey1,3, Sibel Ebru Yalcin1,3, Nikhil S Malvankar5,6.   

Abstract

Extracellular electron transfer by Geobacter species through surface appendages known as microbial nanowires1 is important in a range of globally important environmental phenomena2, as well as for applications in bio-remediation, bioenergy, biofuels and bioelectronics. Since 2005, these nanowires have been thought to be type 4 pili composed solely of the PilA-N protein1. However, previous structural analyses have demonstrated that, during extracellular electron transfer, cells do not produce pili but rather nanowires made up of the cytochromes OmcS2,3 and OmcZ4. Here we show that Geobacter sulfurreducens binds PilA-N to PilA-C to assemble heterodimeric pili, which remain periplasmic under nanowire-producing conditions that require extracellular electron transfer5. Cryo-electron microscopy revealed that C-terminal residues of PilA-N stabilize its copolymerization with PilA-C (to form PilA-N-C) through electrostatic and hydrophobic interactions that position PilA-C along the outer surface of the filament. PilA-N-C filaments lack π-stacking of aromatic side chains and show a conductivity that is 20,000-fold lower than that of OmcZ nanowires. In contrast with surface-displayed type 4 pili, PilA-N-C filaments show structure, function and localization akin to those of type 2 secretion pseudopili6. The secretion of OmcS and OmcZ nanowires is lost when pilA-N is deleted and restored when PilA-N-C filaments are reconstituted. The substitution of pilA-N with the type 4 pili of other microorganisms also causes a loss of secretion of OmcZ nanowires. As all major phyla of prokaryotes use systems similar to type 4 pili, this nanowire translocation machinery may have a widespread effect in identifying the evolution and prevalence of diverse electron-transferring microorganisms and in determining nanowire assembly architecture for designing synthetic protein nanowires.
© 2021. The Author(s), under exclusive licence to Springer Nature Limited.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 34471289      PMCID: PMC9127704          DOI: 10.1038/s41586-021-03857-w

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   69.504


  42 in total

1.  Two isoforms of Geobacter sulfurreducens PilA have distinct roles in pilus biogenesis, cytochrome localization, extracellular electron transfer, and biofilm formation.

Authors:  Lubna V Richter; Steven J Sandler; Robert M Weis
Journal:  J Bacteriol       Date:  2012-03-09       Impact factor: 3.490

2.  Tunable metallic-like conductivity in microbial nanowire networks.

Authors:  Nikhil S Malvankar; Madeline Vargas; Kelly P Nevin; Ashley E Franks; Ching Leang; Byoung-Chan Kim; Kengo Inoue; Tünde Mester; Sean F Covalla; Jessica P Johnson; Vincent M Rotello; Mark T Tuominen; Derek R Lovley
Journal:  Nat Nanotechnol       Date:  2011-08-07       Impact factor: 39.213

3.  A pilin chaperone required for the expression of electrically conductive Geobacter sulfurreducens pili.

Authors:  Xing Liu; Ji Zhan; Xianyue Jing; Shungui Zhou; Derek R Lovley
Journal:  Environ Microbiol       Date:  2019-05-03       Impact factor: 5.491

4.  Syntrophic growth with direct interspecies electron transfer between pili-free Geobacter species.

Authors:  Xing Liu; Shiyan Zhuo; Christopher Rensing; Shungui Zhou
Journal:  ISME J       Date:  2018-06-06       Impact factor: 10.302

5.  Comparative Analysis of Type IV Pilin in Desulfuromonadales.

Authors:  Chuanjun Shu; Ke Xiao; Qin Yan; Xiao Sun
Journal:  Front Microbiol       Date:  2016-12-21       Impact factor: 5.640

Review 6.  The blind men and the filament: Understanding structures and functions of microbial nanowires.

Authors:  Sibel Ebru Yalcin; Nikhil S Malvankar
Journal:  Curr Opin Chem Biol       Date:  2020-10-15       Impact factor: 8.822

7.  Extracellular electron transfer via microbial nanowires.

Authors:  Gemma Reguera; Kevin D McCarthy; Teena Mehta; Julie S Nicoll; Mark T Tuominen; Derek R Lovley
Journal:  Nature       Date:  2005-06-23       Impact factor: 49.962

8.  Structure of Microbial Nanowires Reveals Stacked Hemes that Transport Electrons over Micrometers.

Authors:  Fengbin Wang; Yangqi Gu; J Patrick O'Brien; Sophia M Yi; Sibel Ebru Yalcin; Vishok Srikanth; Cong Shen; Dennis Vu; Nicole L Ing; Allon I Hochbaum; Edward H Egelman; Nikhil S Malvankar
Journal:  Cell       Date:  2019-04-04       Impact factor: 41.582

9.  Cryo-EM reveals the structural basis of long-range electron transport in a cytochrome-based bacterial nanowire.

Authors:  David J Filman; Stephen F Marino; Joy E Ward; Lu Yang; Zoltán Mester; Esther Bullitt; Derek R Lovley; Mike Strauss
Journal:  Commun Biol       Date:  2019-06-19

10.  Electric field stimulates production of highly conductive microbial OmcZ nanowires.

Authors:  Sibel Ebru Yalcin; J Patrick O'Brien; Yangqi Gu; Krystle Reiss; Sophia M Yi; Ruchi Jain; Vishok Srikanth; Peter J Dahl; Winston Huynh; Dennis Vu; Atanu Acharya; Subhajyoti Chaudhuri; Tamas Varga; Victor S Batista; Nikhil S Malvankar
Journal:  Nat Chem Biol       Date:  2020-08-17       Impact factor: 15.040

View more
  15 in total

1.  Cryo-EM structure of an extracellular Geobacter OmcE cytochrome filament reveals tetrahaem packing.

Authors:  Fengbin Wang; Khawla Mustafa; Victor Suciu; Komal Joshi; Chi H Chan; Sol Choi; Zhangli Su; Dong Si; Allon I Hochbaum; Edward H Egelman; Daniel R Bond
Journal:  Nat Microbiol       Date:  2022-07-07       Impact factor: 30.964

2.  On the Existence of Pilin-Based Microbial Nanowires.

Authors:  Derek R Lovley
Journal:  Front Microbiol       Date:  2022-06-06       Impact factor: 6.064

Review 3.  Contribution of configurations, electrode and membrane materials, electron transfer mechanisms, and cost of components on the current and future development of microbial fuel cells.

Authors:  Fátima Borja-Maldonado; Miguel Ángel López Zavala
Journal:  Heliyon       Date:  2022-06-30

4.  Development of a Highly Sensitive Luciferase-Based Reporter System To Study Two-Step Protein Secretion in Cyanobacteria.

Authors:  David A Russo; Julie A Z Zedler; Fabian D Conradi; Nils Schuergers; Poul Erik Jensen; Conrad W Mullineaux; Annegret Wilde; Georg Pohnert
Journal:  J Bacteriol       Date:  2021-12-13       Impact factor: 3.476

5.  Sludge Derived Carbon Modified Anode in Microbial Fuel Cell for Performance Improvement and Microbial Community Dynamics.

Authors:  Kaili Zhu; Yihu Xu; Xiao Yang; Wencai Fu; Wenhao Dang; Jinxia Yuan; Zhiwei Wang
Journal:  Membranes (Basel)       Date:  2022-01-20

Review 6.  Structure Determination of Microtubules and Pili: Past, Present, and Future Directions.

Authors:  James A Garnett; Joseph Atherton
Journal:  Front Mol Biosci       Date:  2022-01-14

7.  Protein nanowires with tunable functionality and programmable self-assembly using sequence-controlled synthesis.

Authors:  Nikhil S Malvankar; Farren J Isaacs; Daniel Mark Shapiro; Gunasheil Mandava; Sibel Ebru Yalcin; Pol Arranz-Gibert; Peter J Dahl; Catharine Shipps; Yangqi Gu; Vishok Srikanth; Aldo I Salazar-Morales; J Patrick O'Brien; Koen Vanderschuren; Dennis Vu; Victor S Batista
Journal:  Nat Commun       Date:  2022-02-11       Impact factor: 17.694

8.  Dissecting the Structural and Conductive Functions of Nanowires in Geobacter sulfurreducens Electroactive Biofilms.

Authors:  Yin Ye; Xing Liu; Kenneth H Nealson; Christopher Rensing; Shuping Qin; Shungui Zhou
Journal:  mBio       Date:  2022-02-15       Impact factor: 7.786

9.  The Signaling Pathway That cGAMP Riboswitches Found: Analysis and Application of Riboswitches to Study cGAMP Signaling in Geobacter sulfurreducens.

Authors:  Zhesen Tan; Chi Ho Chan; Michael Maleska; Bryan Banuelos Jara; Brian K Lohman; Nathan J Ricks; Daniel R Bond; Ming C Hammond
Journal:  Int J Mol Sci       Date:  2022-01-21       Impact factor: 6.208

Review 10.  Biofilm Biology and Engineering of Geobacter and Shewanella spp. for Energy Applications.

Authors:  Yidan Hu; Yinghui Wang; Xi Han; Yawei Shan; Feng Li; Liang Shi
Journal:  Front Bioeng Biotechnol       Date:  2021-12-03
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.