Literature DB >> 34469755

High-resolution structure of the membrane-embedded skeletal muscle ryanodine receptor.

Zephan Melville1, Kookjoo Kim1, Oliver B Clarke2, Andrew R Marks3.   

Abstract

The type 1 ryanodine receptor (RyR)/calcium release channel on the sarcoplasmic reticulum (SR) is required for skeletal muscle excitation-contraction coupling and is the largest known ion channel, composed of four 565-kDa protomers. Cryogenic electron microscopy (cryo-EM) studies of the RyR have primarily used detergent to solubilize the channel; in the present study, we have used cryo-EM to solve high-resolution structures of the channel in liposomes using a gel-filtration approach with on-column detergent removal to form liposomes and incorporate the channel simultaneously. This allowed us to resolve the structure of the channel in the primed and open states at 3.4 and 4.0 Å, respectively, with a single dataset. This method offers validation for detergent-based structures of the RyR and offers a starting point for utilizing a chemical gradient mimicking the SR, where Ca2+ concentrations are millimolar in the lumen and nanomolar in the cytosol.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  calcium release channel; cryoelectron microscopy; excitation-contraction coupling; ion channel; membrane protein; proteoliposomes; ryanodine receptor; sarcoplasmic reticulum; skeletal muscle

Mesh:

Substances:

Year:  2021        PMID: 34469755      PMCID: PMC8741649          DOI: 10.1016/j.str.2021.08.001

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  67 in total

1.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

2.  The pore dimensions of gramicidin A.

Authors:  O S Smart; J M Goodfellow; B A Wallace
Journal:  Biophys J       Date:  1993-12       Impact factor: 4.033

3.  Architecture and conformational switch mechanism of the ryanodine receptor.

Authors:  Rouslan G Efremov; Alexander Leitner; Ruedi Aebersold; Stefan Raunser
Journal:  Nature       Date:  2014-12-01       Impact factor: 49.962

Review 4.  Cryo-electron microscopy of vitrified specimens.

Authors:  J Dubochet; M Adrian; J J Chang; J C Homo; J Lepault; A W McDowall; P Schultz
Journal:  Q Rev Biophys       Date:  1988-05       Impact factor: 5.318

Review 5.  Intracellular calcium release channels: an update.

Authors:  Gaetano Santulli; Ryutaro Nakashima; Qi Yuan; Andrew R Marks
Journal:  J Physiol       Date:  2017-05-15       Impact factor: 5.182

6.  Electron microscopy and computer image averaging of ice-embedded large ribosomal subunits from Escherichia coli.

Authors:  T Wagenknecht; R Grassucci; J Frank
Journal:  J Mol Biol       Date:  1988-01-05       Impact factor: 5.469

7.  Coupled gating of skeletal muscle ryanodine receptors is modulated by Ca2+, Mg2+, and ATP.

Authors:  Maura Porta; Paula L Diaz-Sylvester; Jake T Neumann; Ariel L Escobar; Sidney Fleischer; Julio A Copello
Journal:  Am J Physiol Cell Physiol       Date:  2012-07-11       Impact factor: 4.249

Review 8.  Membrane protein assembly into Nanodiscs.

Authors:  Timothy H Bayburt; Stephen G Sligar
Journal:  FEBS Lett       Date:  2009-10-16       Impact factor: 4.124

9.  Calcium leak through ryanodine receptor is involved in neuronal death induced by mutant huntingtin.

Authors:  Mari Suzuki; Yoshitaka Nagai; Keiji Wada; Tatsuro Koike
Journal:  Biochem Biophys Res Commun       Date:  2012-11-03       Impact factor: 3.575

10.  Solubilization of Membrane Proteins into Functional Lipid-Bilayer Nanodiscs Using a Diisobutylene/Maleic Acid Copolymer.

Authors:  Abraham Olusegun Oluwole; Bartholomäus Danielczak; Annette Meister; Jonathan Oyebamiji Babalola; Carolyn Vargas; Sandro Keller
Journal:  Angew Chem Int Ed Engl       Date:  2017-01-12       Impact factor: 15.336

View more
  3 in total

1.  Molecular mechanism of the severe MH/CCD mutation Y522S in skeletal ryanodine receptor (RyR1) by cryo-EM.

Authors:  Kavita A Iyer; Yifan Hu; Thomas Klose; Takashi Murayama; Montserrat Samsó
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-22       Impact factor: 12.779

2.  Correlation of Phenotype-Genotype and Protein Structure in RYR1-Related Myopathy.

Authors:  Xingzhi Chang; Risheng Wei; Cuijie Wei; Jieyu Liu; Lun Qin; Hui Yan; Yinan Ma; Zhaoxia Wang; Hui Xiong
Journal:  Front Neurol       Date:  2022-05-26       Impact factor: 4.086

3.  Structural basis for activation and gating of IP3 receptors.

Authors:  Emily A Schmitz; Hirohide Takahashi; Erkan Karakas
Journal:  Nat Commun       Date:  2022-03-17       Impact factor: 14.919

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.