| Literature DB >> 34346164 |
Juan Li1, Nan Wang2, Fang Zhang3, Shan Jin1, Yaqi Dong1, Xiangjun Dong1, Yuqing Chen1, Xue Kong1, Yao Tong1, Qi Mi1, Yinghui Zhao1, Yi Zhang4.
Abstract
BACKGROUND: Lung adenocarcinoma (LUAD) is the main subtype of primary lung cancer and is a leading cause of cancer-related death worldwide. PIWI-interacting RNAs (piRNAs) are a type of small non-coding RNAs that may play crucial roles in cancer progression and serve as biomarkers for tumor detection. This study aimed to explore the expression profiles and diagnostic values of piRNAs in LUAD.Entities:
Keywords: PIWI-interacting RNAs; biomarker; diagnosis; lung adenocarcinoma; serum exosome
Mesh:
Substances:
Year: 2021 PMID: 34346164 PMCID: PMC8447905 DOI: 10.1111/1759-7714.14094
Source DB: PubMed Journal: Thorac Cancer ISSN: 1759-7706 Impact factor: 3.500
FIGURE 1The analysis of dysregulated piRNAs in LUAD patients. (a) Bar graph of small RNA transcripts identified from LUAD patient's tissue samples. (b,c) The heatmap (b) and volcano plots (c) of 85 differently expressed piRNAs in LUAD patients. T, LUAD tissues; N, paired adjacent non‐tumor tissues
Feature of top 10 mostly upregulated piRNAs
| piRNA_ID | log2FC | Regulation | |
|---|---|---|---|
| piR‐hsa‐1008 | 4.636623662 | 0.000157193 | UP |
| piR‐hsa‐26925 | 3.680927145 | 0.009539399 | UP |
| piR‐hsa‐28231 | 3.676403107 | 0.004281919 | UP |
| piR‐hsa‐11256 | 3.4113601 | 0.007260661 | UP |
| piR‐hsa‐5444 | 3.388361348 | 0.010085528 | UP |
| piR‐hsa‐30636 | 3.356912918 | 0.010721393 | UP |
| piR‐hsa‐24143 | 3.313713536 | 0.03099702 | UP |
| piR‐hsa‐6842 | 3.100589608 | 0.049094356 | UP |
| piR‐hsa‐8757 | 3.07264821 | 0.004560042 | UP |
| piR‐hsa‐15572 | 3.069194841 | 6.35E‐05 | UP |
FIGURE 2Screening and verification of candidate upregulated piRNAs in tissues. (a) Heatmap of top 10 candidate piRNAs with statistical significance. T, LUAD tissues; N, paired adjacent non‐tumor tissues. (b–e) Relative expressions of piR‐hsa‐26925 (b), piR‐hsa‐5444 (c), piR‐hsa‐30636 (d) and piR‐hsa‐8757 (e) in LUAD patients. *p < 0.05, ***p < 0.001
FIGURE 3Characterization of serum exosomes. (a) TEM images of exosomes isolated and detected from serum samples (scale bar, 200 nm). (b) the NTA showed the size distribution and the number of serum exosomes. (c) Western blot analysis of exosomal markers, including TSG101 and CD9
FIGURE 4The diagnostic values of piRNAs in serum exosomes. (a,b) Relative expressions of piR‐hsa‐26925 (a) and piR‐hsa‐5444 (b) in the serum exosome samples from LUAD patients and healthy controls. (c,d). ROC curve for piR‐hsa‐26925 (c) and piR‐hsa‐5444 (d) in serum exosome samples. (e) ROC curve for the 2‐piRNA panel in serum exosome samples. ***p < 0.001
FIGURE 5The stability of serum exosomal piRNAs. Serum exosome samples were subjected to incubation at room temperature, repeated freeze–thaw cycles, and incubation at −80°C, and qRT‐PCR was used to detect the expressions of piR‐has‐26925 (a–c) and piR‐has‐5444 (d–f)