Literature DB >> 34342780

Hymenobacter puniceus sp. nov., radiation resistant bacteria isolated from soil in South Korea.

Yuna Park1, Soohyun Maeng1, Tuvshinzaya Damdintogtokh1, Minji Bang1, Hyejin Oh1, Sathiyaraj Srinivasan2, Myung Kyum Kim3.   

Abstract

Two novel Gram-negative bacterial strains BT190T and BT191 were isolated from soil collected in Uijeongbu city (37°44'55″N, 127°02'20″E), Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strains BT190T and BT191 belong to a distinct lineage within the genus Hymenobacter (family Hymenobacteraceae, order Cytophagales, class Cytophagia). The level of 16S rRNA gene sequence similarity between the strains BT190T and BT190 was 99.5%. The strains BT190T and BT191 were closely related to Hymenobacter swuensis DY53T (97.0% 16S rRNA gene similarity), Hymenobacter metallilatus 9PBR-2 T (96.8%), Hymenobacter tibetensis XTM003T (96.8%) and Hymenobacter yonginensis HMD1010T (96.6%). The genome size of strain BT190T was 4,859,864 bp. The DNA G+C content of strain BT190T was 55.3 mol%. Bacterial growth was observed at 4-30 °C (optimum 25 °C) and pH 6.0-9.0 (optimum, pH 6.0-7.0) on R2A agar. Colonies of strains BT190T and BT191 were raised, smooth, circular and red-pink colored. The sole respiratory quinone of strain BT190T was MK-7 and the predominant cellular fatty acids were iso-C15:0, C16:1 ω5c, summed feature 3 (C16:1 ω6c / C16:1 ω7c) and summed feature 4 (iso-C17:1 I / anteiso-C17:1 B). The major polar lipids of strain BT190T were aminophospholipid (APL) and phosphatidylethanolamine (PE). Based on the chemotaxonomic, biochemical, and phylogenetic analysis, strains BT190T and BT191 can be suggested as a novel bacterial species within the genus Hymenobacter, for which the name Hymenobacter puniceus sp. nov is proposed. The type strain of Hymenobacter puniceus is BT190T (= KCTC 72342 T = NBRC 114860 T).
© 2021. The Author(s), under exclusive licence to Springer Nature Switzerland AG.

Entities:  

Keywords:  Hymenobacter; Hymenobacteraceae; Novel species; Taxonomy

Year:  2021        PMID: 34342780     DOI: 10.1007/s10482-021-01630-7

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  13 in total

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Journal:  Syst Appl Microbiol       Date:  1998-08       Impact factor: 4.022

2.  Hymenobacter perfusus sp. nov., Hymenobacter flocculans sp. nov. and Hymenobacter metalli sp. nov. three new species isolated from an uranium mine waste water treatment system.

Authors:  Ana Paula Chung; André Lopes; M Fernanda Nobre; Paula V Morais
Journal:  Syst Appl Microbiol       Date:  2010-11-03       Impact factor: 4.022

3.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

Authors:  Sudhir Kumar; Glen Stecher; Michael Li; Christina Knyaz; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2018-06-01       Impact factor: 16.240

4.  Hymenobacter qilianensis sp. nov., isolated from a subsurface sandstone sediment in the permafrost region of Qilian Mountains, China and emended description of the genus Hymenobacter.

Authors:  Lu Han; Shu-Jiao Wu; Chun-Yan Qin; You-Hai Zhu; Zhen-Quan Lu; Bing Xie; Jie Lv
Journal:  Antonie Van Leeuwenhoek       Date:  2014-03-28       Impact factor: 2.271

5.  Hymenobacter yonginensis sp. nov., isolated from a mesotrophic artificial lake.

Authors:  Yochan Joung; Sung-Heun Cho; Haneul Kim; Seung Bum Kim; Kiseong Joh
Journal:  Int J Syst Evol Microbiol       Date:  2010-07-23       Impact factor: 2.747

6.  Hymenobacter tibetensis sp. nov., a UV-resistant bacterium isolated from Qinghai-Tibet plateau.

Authors:  Jun Dai; Yang Wang; Lei Zhang; Yali Tang; Xuesong Luo; Hongli An; Chengxiang Fang
Journal:  Syst Appl Microbiol       Date:  2009-09-17       Impact factor: 4.022

7.  Comparative survival analysis of 12 histidine kinase mutants of Deinococcus radiodurans after exposure to DNA-damaging agents.

Authors:  Seonghun Im; Dusup Song; Minho Joe; Dongho Kim; Don-Hee Park; Sangyong Lim
Journal:  Bioprocess Biosyst Eng       Date:  2013-01-25       Impact factor: 3.210

8.  Hymenobacter swuensis sp. nov., a gamma-radiation-resistant bacteria isolated from mountain soil.

Authors:  Jae-Jin Lee; Sathiyaraj Srinivasan; Sangyong Lim; Minho Joe; Sang Hee Lee; Shin Ae Kwon; Yoon Jung Kwon; Jin Lee; Jin Ju Choi; Hye Min Lee; Young Kyung Auh; Myung Kyum Kim
Journal:  Curr Microbiol       Date:  2013-10-17       Impact factor: 2.188

9.  Hymenobacter metallilatus sp. nov., isolated from abandoned lead-zinc ore.

Authors:  Guang-Da Feng; Jun Zhang; Xian-Jiao Zhang; Sheng-Nan Wang; Xiong Xiong; Yu-Lian Zhang; Hua-Rui Huang; Hong-Hui Zhu
Journal:  Int J Syst Evol Microbiol       Date:  2019-05-23       Impact factor: 2.747

10.  Hymenobacter aquatilis sp. nov., isolated from a mesotrophic artificial lake.

Authors:  Heeyoung Kang; Inseong Cha; Haneul Kim; Kiseong Joh
Journal:  Int J Syst Evol Microbiol       Date:  2018-04-25       Impact factor: 2.747

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  1 in total

1.  Hymenobacter cyanobacteriorum sp. nov., isolated from a freshwater reservoir during the cyanobacterial bloom period.

Authors:  Ve Van Le; So-Ra Ko; Mingyeong Kang; Hee-Mock Oh; Chi-Yong Ahn
Journal:  Arch Microbiol       Date:  2022-06-06       Impact factor: 2.667

  1 in total

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