| Literature DB >> 34315899 |
Mattia Manica1,2, Giorgio Guzzetta1,2, Flavia Riccardo3, Antonio Valenti4, Piero Poletti1,2, Valentina Marziano1,2, Filippo Trentini1,2, Xanthi Andrianou3,5, Alberto Mateo-Urdiales3,6, Martina Del Manso3,6, Massimo Fabiani3, Maria Fenicia Vescio3, Matteo Spuri3, Daniele Petrone3, Antonino Bella3, Sergio Iavicoli4, Marco Ajelli7,8, Silvio Brusaferro3, Patrizio Pezzotti3, Stefano Merler9,10.
Abstract
To counter the second COVID-19 wave in autumn 2020, the Italian government introduced a system of physical distancing measures organized in progressively restrictive tiers (coded as yellow, orange, and red) imposed on a regional basis according to real-time epidemiological risk assessments. We leverage the data from the Italian COVID-19 integrated surveillance system and publicly available mobility data to evaluate the impact of the three-tiered regional restriction system on human activities, SARS-CoV-2 transmissibility and hospitalization burden in Italy. The individuals' attendance to locations outside the residential settings was progressively reduced with tiers, but less than during the national lockdown against the first COVID-19 wave in the spring. The reproduction number R(t) decreased below the epidemic threshold in 85 out of 107 provinces after the introduction of the tier system, reaching average values of about 0.95-1.02 in the yellow tier, 0.80-0.93 in the orange tier and 0.74-0.83 in the red tier. We estimate that the reduced transmissibility resulted in averting about 36% of the hospitalizations between November 6 and November 25, 2020. These results are instrumental to inform public health efforts aimed at preventing future resurgence of cases.Entities:
Year: 2021 PMID: 34315899 PMCID: PMC8316570 DOI: 10.1038/s41467-021-24832-z
Source DB: PubMed Journal: Nat Commun ISSN: 2041-1723 Impact factor: 14.919
Description of restrictions applied in Italy since October 14[4–7,16–20].
| Restrictions | October 14–November 5, 2020 | November 6, 2020–onwards | ||
|---|---|---|---|---|
| National restrictions | Yellow tier | Orange tier | Red tier | |
| Face masks | Mandatory in outdoor spaces | Mandatory in outdoor spaces | Mandatory in outdoor spaces | Mandatory in outdoor spaces |
| Individual movements | No restrictions | Stay-home mandate between 10 p.m. and 5 a.m. (except for work, health and other certified reasons) | Stay-home mandate between 10 p.m. and 5 a.m. and ban on movements between municipalities and to/from other regions (except for work, health and other certified reasons) | Stay-home mandate and ban on movements between municipalities and to/from other regions (except for work, health and other certified reasons). |
| Retail and services | Open | Shopping malls closed during weekends and holidays (with the exception of essential retail & services) | Shopping malls closed during weekends and holidays (with the exception of essential retail & services) | All shops closed (with the exception of essential retail & services) |
| Schools & childcare | Open until October 18. Recommendation to adopt distance learning for high schools and universities since October 19. Mandatory distance learning for at least 75% of the time in high schools since October 26. Regional exceptions:- in Campania, kindergartens were closed and distance learning for all schools adopted since October 16; - in Apulia, distance learning for all schools adopted since October 30; - in Lombardy, 100% distance learning for high schools since October 26; - in Calabria, 100% distance learning for high schools and universities since October 26. | Distance learning in high schools and universities except when on-site attendance is essential (i.e., for laboratory activities) | Distance learning in high schools and universities except when on-site attendance is essential (i.e., for laboratory activities) | Distance learning in second and third grade of middle schools, in all grades of high schools and universities |
| Bars serving food, Cafès & Restaurants | No service after 12 a.m. until October 25. No service after 6 p.m. and take away allowed until 12 a.m. since October 26. | No service after 6 p.m. and take away allowed until 10 p.m. | Closed. Take away allowed until 10 p.m. | Closed. Take away allowed until 10 p.m. |
| Public transport | No capacity reduction In Umbria, 50% capacity reduction since October 21. | 50% capacity reduction (except school service) | 50% capacity reduction (except school service) | 50% capacity reduction (except school service) |
| Indoor recreational and cultural venues | Open with capacity reduction until October 25. Closed since October 26. | Closed | Closed | Closed |
| Gyms, pools & leisure venues | Open until October 25. Non-professional contact sports not permitted. Closed except outdoor sport centers since October 26. | Closed except outdoor sport centers | Closed except outdoor sport centers | Individual outdoor training only (except sports events of national interest) |
Fig. 1Changes in the time spent in different locations relative to pre-pandemic values over time8, September 25–November 25.
Colors represent three distinct intervention periods, separated by vertical darker lines: September 25–October 13 (gray, no interventions), October 14–November 5 (teal, national interventions), November 6–November 25 (yellow, orange and red, aggregating provinces by the corresponding tier). Thin lines represent values for individual provinces. Thick lines are regression lines computed over provinces with the same restrictions and are reported to help the visual identification of trends in different periods.
Change in the number of visitors in different locations relative to pre-pandemic values, as estimated by a linear mixed model (mean and 95%CI, values in percentage).
| Location | National | Yellow | Orange | Red |
|---|---|---|---|---|
| Grocery/Pharmacy | −0.9 (−2.7; 0.9) | −6.2 (−8.0; −4.3) | −12.2 (−14.1; −10.3) | −22.0 (−24.0; -20.1) |
| Parks | 11.1 (7.3; 14.9) | 5.0 (0.8; 9.1) | −20.1 (−24.3; −15.8) | -34.1 (−38.6; -29.6) |
| Retail/Recreation | −20.8 (−23.5; −18.2) | −29.8 (−32.5; −27.1) | −46.6 (−49.3; −43.8) | −55.1 (−57.9; -52.3) |
| Transit stations | −19.7 (-22.6; −16.7) | −34.4 (−37.4; −31.3) | −44.6 (−47.7; -41.5) | −50.9 (−54.1; −47.7) |
| Workplaces | −16.7 (−17.9; −15.4) | −23.4 (−24.7; −22.1) | −28.2 (−29.6; −26.9) | −32.6 (−34.0; −31.2) |
| Residential | 6.9 (6.4; 7.3) | 10.6 (10.1; 11.1) | 14.7 (14.2; 15.2) | 16.9 (16.4; 17.4) |
For residential locations, the reported value refers to the changes in the time spent. National interventions were in place from October 14 to November 5, 2020, while values for different tiers refer to the period November 6–25.
Fig. 2Temporal dynamics of the net reproduction numbers R(t) and of the assigned tiers between October 30 and November 25.
Each line shows the mean R(t) for an Italian province (black) or region (blue). Provinces are grouped by region as tiers were assigned on a regional basis. Colored rectangles refer to the timeframe when the different tiers were adopted: teal = national interventions, yellow, orange and red as the corresponding tier (see Table 1 for restrictions associated with the different tiers).
Models to evaluate the change in transmissibility (R(t)) associated to tiers.
| Model | Method | Mean si (days) | Geographic scale | Number of data points | Estimated outcome | Grouping | |
|---|---|---|---|---|---|---|---|
| A | LMM | 6.68 | Province | 214 | Net change | Maximum tier | 0.58 |
| B | LMM | 6.68 | Province | 214 | Relative change | Maximum tier | 0.62 |
| C | LMM | 6.68 | Province | 214 | Net change | Tier | 0.58 |
| D | LMM | 6.68 | Region | 42 | Net change | Maximum tier | 0.70 |
| E | LMM | 5.01 | Province | 122 | Net change | Maximum tier | 0.56 |
| F | Renewal equation | 6.68 | Region | 21 | Final R(t) | No grouping | – |
Net change refers to the difference between the mean R(t) in the period October 30–November 5, 2020 and the mean R(t) in the period November 19–25, 2020. Relative change refers to the net change divided by the mean R(t) in the period October 30–November 5, 2020. Final R(t) refers to the expected final value of R(t) after 2 weeks since the enactment of the tier, considered as the time for an intervention to reach its full effect on R(t)[11]. Maximum tier indicates that provinces and regions were grouped by the strictest tier enacted over the study period. In model C, only provinces that did not change tier over the study period were selected, and the assigned tier was used for the grouping. R2 is the estimated marginal coefficient of determination computed based on Nakagawa et al. [27].
LMM linear mixed model, SI serial interval.
Fig. 3Estimates from LMMs.
A Net change of the reproduction number between the week October 30–November 5, 2020, and the week November 19–25, 2020, by tier group. n = 107 observations (provinces) observed over 2 time periods for model A, B,C, and E, n = 21 observations (regions) observed over 2 time periods for model D. B Relative change of the reproduction number between the week October 30–November 5, 2020, and the week November 19–25, 2020, by tier group, n = 107 observations (provinces) observed over 2 time periods for model A, B, C, and E, n = 21 observations (regions) observed over two time periods for model D. C Mean reproduction number in the week October 30–November 5, 2020, and in the week November 19–25, 2020, by tier group, n = 107 observations (provinces) in each time period for model A,B,C, and E, n = 21 observations (regions) in each time period for model D. Dots (center of the error bars) represent the mean values, vertical lines represent 95% CI. Colors (yellow, orange and red) are associated with the corresponding tier group. See Table 3 for a description of models.
Fig. 4Incidence of hospital admissions by tier level over the period October 14–November 25, 2020.
Regions are grouped by the maximum tier assigned over the study period. Black lines represent observed hospital admissions. Teal lines represent mean projected values (shaded area: 95% projection interval) under the assumption that national restrictions were maintained after November 6, i.e., that the reproduction number was constant over the projection period. Shaded areas between the two curves highlight averted hospitalizations, the colors of each shaded area are associated with the corresponding tier.