Literature DB >> 34307840

RNA and DNA nanoparticles for triggering RNA interference.

Ziad El Tannir1, Kirill A Afonin1,2, Bruce A Shapiro2.   

Abstract

Control over the delivery of different functionalities and their synchronized activation in vivo is a challenging undertaking that requires careful design and implementation. The goal of the research highlighted herein was to develop a platform allowing the simultaneous activation of multiple RNA interference pathways and other functionalities inside cells. Our team has developed several RNA, RNA/DNA and DNA/RNA nanoparticles able to successfully complete such tasks. The reported designs can potentially be used to target myriad of different diseases.

Keywords:  FRET; RNA interference; RNA nanotechnology; RNA/DNA hybrids; siRNAs

Year:  2015        PMID: 34307840      PMCID: PMC8301276     

Source DB:  PubMed          Journal:  RNA Dis        ISSN: 2375-2467


  31 in total

1.  Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate.

Authors:  S M Elbashir; J Martinez; A Patkaniowska; W Lendeckel; T Tuschl
Journal:  EMBO J       Date:  2001-12-03       Impact factor: 11.598

2.  Computational and experimental studies of reassociating RNA/DNA hybrids containing split functionalities.

Authors:  Kirill A Afonin; Eckart Bindewald; Maria Kireeva; Bruce A Shapiro
Journal:  Methods Enzymol       Date:  2015-02-10       Impact factor: 1.600

3.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

4.  Design and self-assembly of siRNA-functionalized RNA nanoparticles for use in automated nanomedicine.

Authors:  Kirill A Afonin; Wade W Grabow; Faye M Walker; Eckart Bindewald; Marina A Dobrovolskaia; Bruce A Shapiro; Luc Jaeger
Journal:  Nat Protoc       Date:  2011-12-01       Impact factor: 13.491

5.  Co-transcriptional assembly of chemically modified RNA nanoparticles functionalized with siRNAs.

Authors:  Kirill A Afonin; Maria Kireeva; Wade W Grabow; Mikhail Kashlev; Luc Jaeger; Bruce A Shapiro
Journal:  Nano Lett       Date:  2012-09-27       Impact factor: 11.189

6.  Fluorescent monitoring of RNA assembly and processing using the split-spinach aptamer.

Authors:  Tucker A Rogers; Grant E Andrews; Luc Jaeger; Wade W Grabow
Journal:  ACS Synth Biol       Date:  2014-05-08       Impact factor: 5.110

7.  Computational and experimental characterization of RNA cubic nanoscaffolds.

Authors:  Kirill A Afonin; Wojciech Kasprzak; Eckart Bindewald; Praneet S Puppala; Alex R Diehl; Kenneth T Hall; Tae Jin Kim; Michael T Zimmermann; Robert L Jernigan; Luc Jaeger; Bruce A Shapiro
Journal:  Methods       Date:  2013-11-01       Impact factor: 3.608

Review 8.  Stable RNA nanoparticles as potential new generation drugs for cancer therapy.

Authors:  Yi Shu; Fengmei Pi; Ashwani Sharma; Mehdi Rajabi; Farzin Haque; Dan Shu; Markos Leggas; B Mark Evers; Peixuan Guo
Journal:  Adv Drug Deliv Rev       Date:  2013-11-22       Impact factor: 15.470

9.  Synergistic self-assembly of RNA and DNA molecules.

Authors:  Seung Hyeon Ko; Min Su; Chuan Zhang; Alexander E Ribbe; Wen Jiang; Chengde Mao
Journal:  Nat Chem       Date:  2010-10-31       Impact factor: 24.427

10.  Enhancing immunomodulation on innate immunity by shape transition among RNA triangle, square and pentagon nanovehicles.

Authors:  Emil F Khisamutdinov; Hui Li; Daniel L Jasinski; Jiao Chen; Jian Fu; Peixuan Guo
Journal:  Nucleic Acids Res       Date:  2014-08-04       Impact factor: 16.971

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