Literature DB >> 34296223

A Multi-Tissue Global Estimation Framework for Asymmetric Fiber Orientation Distributions.

Ye Wu1,2, Yuanjing Feng1, Dinggang Shen2, Pew-Thian Yap2.   

Abstract

In connectomics, tractography involves tracing connections across gray-white matter boundaries in gyral blades of complex cortical convolutions. To date, most tractography algorithms exhibit gyral bias with fiber streamlines preferentially terminating at gyral crowns rather than sulcal banks or fundi. In this work, we will demonstrate that a multi-tissue global estimation framework of the asymmetric fiber orientation distribution function (AFODF) will mitigate the effects of gyral bias and will allow fiber streamlines at gyral blades to make sharper turns into the cortical gray matter. This is validated using in-vivo data from the Human Connectome Project (HCP), showing that, in a typical gyral blade with high curvature, the fiber streamlines estimated using AFODFs bend more naturally into the cortex than FODFs. Furthermore, we show that AFODF tractography results in better cortico-cortical connectivity.

Entities:  

Year:  2018        PMID: 34296223      PMCID: PMC8294669          DOI: 10.1007/978-3-030-00931-1_6

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  10 in total

1.  About the geometry of asymmetric fiber orientation distributions.

Authors:  Marco Reisert; Elias Kellner; Valerij G Kiselev
Journal:  IEEE Trans Med Imaging       Date:  2012-02-15       Impact factor: 10.048

2.  Multi-Tissue Decomposition of Diffusion MRI Signals via Sparse-Group Estimation.

Authors: 
Journal:  IEEE Trans Image Process       Date:  2016-07-07       Impact factor: 10.856

3.  Robust determination of the fibre orientation distribution in diffusion MRI: non-negativity constrained super-resolved spherical deconvolution.

Authors:  J-Donald Tournier; Fernando Calamante; Alan Connelly
Journal:  Neuroimage       Date:  2007-02-21       Impact factor: 6.556

4.  Estimation of fiber orientations using neighborhood information.

Authors:  Chuyang Ye; Jiachen Zhuo; Rao P Gullapalli; Jerry L Prince
Journal:  Med Image Anal       Date:  2016-05-16       Impact factor: 8.545

Review 5.  The WU-Minn Human Connectome Project: an overview.

Authors:  David C Van Essen; Stephen M Smith; Deanna M Barch; Timothy E J Behrens; Essa Yacoub; Kamil Ugurbil
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

6.  Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data.

Authors:  Ben Jeurissen; Jacques-Donald Tournier; Thijs Dhollander; Alan Connelly; Jan Sijbers
Journal:  Neuroimage       Date:  2014-08-07       Impact factor: 6.556

7.  Confirmation of a gyral bias in diffusion MRI fiber tractography.

Authors:  Kurt Schilling; Yurui Gao; Vaibhav Janve; Iwona Stepniewska; Bennett A Landman; Adam W Anderson
Journal:  Hum Brain Mapp       Date:  2017-12-19       Impact factor: 5.038

8.  Dipy, a library for the analysis of diffusion MRI data.

Authors:  Eleftherios Garyfallidis; Matthew Brett; Bagrat Amirbekian; Ariel Rokem; Stefan van der Walt; Maxime Descoteaux; Ian Nimmo-Smith
Journal:  Front Neuroinform       Date:  2014-02-21       Impact factor: 4.081

9.  Improved tractography using asymmetric fibre orientation distributions.

Authors:  Matteo Bastiani; Michiel Cottaar; Krikor Dikranian; Aurobrata Ghosh; Hui Zhang; Daniel C Alexander; Timothy E Behrens; Saad Jbabdi; Stamatios N Sotiropoulos
Journal:  Neuroimage       Date:  2017-06-29       Impact factor: 6.556

10.  The challenge of mapping the human connectome based on diffusion tractography.

Authors:  Klaus H Maier-Hein; Peter F Neher; Jean-Christophe Houde; Marc-Alexandre Côté; Eleftherios Garyfallidis; Jidan Zhong; Maxime Chamberland; Fang-Cheng Yeh; Ying-Chia Lin; Qing Ji; Wilburn E Reddick; John O Glass; David Qixiang Chen; Yuanjing Feng; Chengfeng Gao; Ye Wu; Jieyan Ma; Renjie He; Qiang Li; Carl-Fredrik Westin; Samuel Deslauriers-Gauthier; J Omar Ocegueda González; Michael Paquette; Samuel St-Jean; Gabriel Girard; François Rheault; Jasmeen Sidhu; Chantal M W Tax; Fenghua Guo; Hamed Y Mesri; Szabolcs Dávid; Martijn Froeling; Anneriet M Heemskerk; Alexander Leemans; Arnaud Boré; Basile Pinsard; Christophe Bedetti; Matthieu Desrosiers; Simona Brambati; Julien Doyon; Alessia Sarica; Roberta Vasta; Antonio Cerasa; Aldo Quattrone; Jason Yeatman; Ali R Khan; Wes Hodges; Simon Alexander; David Romascano; Muhamed Barakovic; Anna Auría; Oscar Esteban; Alia Lemkaddem; Jean-Philippe Thiran; H Ertan Cetingul; Benjamin L Odry; Boris Mailhe; Mariappan S Nadar; Fabrizio Pizzagalli; Gautam Prasad; Julio E Villalon-Reina; Justin Galvis; Paul M Thompson; Francisco De Santiago Requejo; Pedro Luque Laguna; Luis Miguel Lacerda; Rachel Barrett; Flavio Dell'Acqua; Marco Catani; Laurent Petit; Emmanuel Caruyer; Alessandro Daducci; Tim B Dyrby; Tim Holland-Letz; Claus C Hilgetag; Bram Stieltjes; Maxime Descoteaux
Journal:  Nat Commun       Date:  2017-11-07       Impact factor: 14.919

  10 in total
  2 in total

1.  Active Cortex Tractography.

Authors:  Ye Wu; Yoonmi Hong; Sahar Ahmad; Pew-Thian Yap
Journal:  Med Image Comput Comput Assist Interv       Date:  2021-09-21

2.  Insights from the IronTract challenge: Optimal methods for mapping brain pathways from multi-shell diffusion MRI.

Authors:  Chiara Maffei; Gabriel Girard; Kurt G Schilling; Dogu Baran Aydogan; Nagesh Adluru; Andrey Zhylka; Ye Wu; Matteo Mancini; Andac Hamamci; Alessia Sarica; Achille Teillac; Steven H Baete; Davood Karimi; Fang-Cheng Yeh; Mert E Yildiz; Ali Gholipour; Yann Bihan-Poudec; Bassem Hiba; Andrea Quattrone; Aldo Quattrone; Tommy Boshkovski; Nikola Stikov; Pew-Thian Yap; Alberto de Luca; Josien Pluim; Alexander Leemans; Vivek Prabhakaran; Barbara B Bendlin; Andrew L Alexander; Bennett A Landman; Erick J Canales-Rodríguez; Muhamed Barakovic; Jonathan Rafael-Patino; Thomas Yu; Gaëtan Rensonnet; Simona Schiavi; Alessandro Daducci; Marco Pizzolato; Elda Fischi-Gomez; Jean-Philippe Thiran; George Dai; Giorgia Grisot; Nikola Lazovski; Santi Puch; Marc Ramos; Paulo Rodrigues; Vesna Prčkovska; Robert Jones; Julia Lehman; Suzanne N Haber; Anastasia Yendiki
Journal:  Neuroimage       Date:  2022-05-26       Impact factor: 7.400

  2 in total

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