| Literature DB >> 34265184 |
Sheng-Jian Qiu1, Rui Zhang2,3, Yan Guo1, Yue Zhao1, Zhi-Hui Zhao1, Wen-Chao Liu1.
Abstract
The present study was conducted to evaluate the effects of dietary supplementation of Enteromorpha polysaccharides (EP) on relative organ weight of broilers, and RNA-seq technique was used to reveal the potential molecular mechanisms of the positive effects of EP on relative organ weight. A total of 396 1-day-old male chicks (Arbor Acres) were randomly assigned to six dietary treatments containing EP at 0 (EP0), 1000 (EP1000), 2500 (EP2500), 4000 (EP4000), 5500 (EP5500), and 7000 (EP7000) mg/kg levels for a 35-day feeding trial. At the end of feeding trail, six birds (one bird from each replicate cage) were randomly selected from each treatment and then slaughtered for relative organ weight analysis. The results showed that the relative weight of bursa of Fabricius were increased in the EP1000 group (p < 0.05), and then three bursa of Fabricius samples from each group (EP0 and EP1000) were randomly selected for RNA-seq analysis. The results of RNA-seq analysis showed that there were 20 differentially expressed genes (DEGs) between EP0 and EP1000 groups, among the DEGs, 6 genes were upregulated and 14 genes were downregulated by EP1000 supplementation (p-adjust < 0.05). Gene ontology (GO) enrichment analysis suggested that the DEGs were mainly enriched in negative regulation of toll-like receptor 9 signaling pathway (p-corrected < 0.05). Kyoto encyclopedia of genes and genomes (KEGG) enrichment analysis showed that the DEGs were mainly enriched in phagosome, mitophagy-animal, Salmonella infection, autophagy-animal signaling pathways (p-corrected = 0.081). Taken together, dietary EP supplementation at 1000 mg/kg level promoted the relative weight of bursa of Fabricius may be involved in improving the immune function of broilers. These findings provided a reference for further exploring the specific molecular mechanism of EP that affecting the organ development in broilers.Entities:
Keywords: Enteromorpha polysaccharides; RNA-seq; broilers; bursa of Fabricius
Mesh:
Substances:
Year: 2021 PMID: 34265184 PMCID: PMC8464242 DOI: 10.1002/vms3.573
Source DB: PubMed Journal: Vet Med Sci ISSN: 2053-1095
Basal diet composition (as‐fed basis)
| Items | d 1—21 | d 22‐35 |
|---|---|---|
| Ingredients (%) | ||
| Corn | 57.20 | 60.74 |
| Soybean meal (CP 45%) | 29.24 | 25.03 |
| Corn gluten meal (CP 60%) | 4.40 | 3.83 |
| Soybean oil | 3.41 | 5.00 |
| Limestone | 0.91 | 1.02 |
| Dicalcium phosphate | 2.07 | 1.93 |
| Salt | 0.32 | 0.37 |
| Methionine, 99% | 0.33 | 0.37 |
| Lysine‐HCI, 24% | 1.68 | 1.28 |
| Threonine, 98.5% | 0.18 | 0.18 |
| Vitamin premix | 0.06 | 0.05 |
| Trace mineral premix | 0.10 | 0.10 |
| Choline, 50% | 0.10 | 0.10 |
| Calculated values | ||
| ME (kcal/kg) | 3020.00 | 3200.00 |
| CF (%) | 6.30 | 7.50 |
| Lys (%) | 1.50 | 1.20 |
| CP (%) | 22.20 | 20.07 |
| Met (%) | 0.65 | 0.64 |
| Met+Cys (%) | 1.37 | 1.41 |
| Ca (%) | 0.90 | 0.95 |
| Total P (%) | 0.71 | 0.66 |
Provided per kilogram of diet: 15,000 IU of vitamin A, 3750 IU of vitamin D3, 37.5 mg of vitamin E, 2.55 mg of vitamin K3, 3 mg of thiamin, 7.5 mg of riboflavin, 4.5 mg of vitamin B6, 24 μg of vitamin B12, 51 mg of niacin, 1.5 mg of folic acid, 0.2 mg of biotin, and 13.5 mg of pantothenic acid.
Provided per kilogram of diet: 37.5 mg of Zn, 37.5 mg of Mn, 37.5 mg of Fe, 3.75 mg of Cu, 0.83 mg of I, and 62.5 mg of S.
The primers information of qPCR
| Genes | Primer sequence (5′‐3′) | Product size (bp) | Annealing temperature)℃( | Accession No. |
|---|---|---|---|---|
|
| F: AAGGAAGCCGAAAAACA | 163 | 51 | XM_015296343.2 |
| R: GGACACCGACACAATGC | ||||
|
| F: GCCCCGCCCCTCG | 181 | 56 | XM_015297582.1 |
| R: GCCGCCCTTCCCG | ||||
|
| F: GCCACACCTCTCCCAAC | 133 | 52 | XM_015291568.2 |
| R: GATACCACATCCCCAGT | ||||
|
| F: GCGTGACATCAAGGAGAAGC | 187 | 60 | NM_205518.1 |
| F: GGACTCCATACCCAAGAAAGAT | ||||
Effects of dietary graded levels of Enteromorpha polysaccharides (EP) on relative organ weight (%) of 35 days broilers
| Dietary EP levels (mg/kg) | Proventriculus, % | Gizzard, % | Pancreas, % | Heart, % | Liver, % | Spleen, % | Thymus, % | Bursa of Fabricius, % |
|---|---|---|---|---|---|---|---|---|
| 0 | 0.419 | 1.772 | 0.253 | 0.392 | 2.995 | 0.16 | 0.389 |
|
| 1000 | 0.398 | 1.662 | 0.258 | 0.396 | 2.775 | 0.188 | 0.485 |
|
| 2500 | 0.392 | 1.726 | 0.245 | 0.372 | 2.631 | 0.185 | 0.515 | 0.243ab |
| 4000 | 0.400 | 1.612 | 0.231 | 0.340 | 2.67 | 0.139 | 0.454 | 0.249ab |
| 5500 | 0.420 | 1.63 | 0.266 | 0.385 | 2.856 | 0.168 | 0.581 | 0.219ab |
| 7000 | 0.445 | 1.687 | 0.244 | 0.373 | 2.713 | 0.212 | 0.498 | 0.220ab |
| SEM | 0.027 | 0.109 | 0.02 | 0.041 | 0.196 | 0.033 | 0.068 | 0.043ab |
| Contrast | ||||||||
| Linear | 0.622 | 0.403 | 0.390 | 0.171 | 0.278 | 0.652 | 0.469 | 0.486 |
| Quadratic | 0.603 | 0.986 | 0.643 | 0.415 | 0.349 | 0.271 | 0.258 | 0.130 |
| Cubic | 0.994 | 0.477 | 0.853 | 0.821 | 0.860 | 0.942 | 0.931 | 0.135 |
SEM, standard errors of mean.
The differentially expressed genes identified between EP0 and EP1000 groups
| Genes_ID | Genes_name | EP0_mean | EP1000_mean | Log2FC(EP1000/EP0) | Regulate | |
|---|---|---|---|---|---|---|
| ENSGALG00000008376 | EIF2B5 | 0.000 | 4.286 | 10.560 | 0.001 | up |
| ENSGALG00000012813 | – | 0.018 | 6.827 | 9.971 | 0.002 | up |
| ENSGALG00000029368 | – | 3.357 | 17.491 | 3.368 | 0.002 | up |
| ENSGALG00000029577 | – | 0.476 | 10.486 | 4.541 | 0.030 | up |
| ENSGALG00000038833 | – | 0.000 | 6.828 | 8.559 | 0.012 | up |
| ENSGALG00000041647 | – | 0.000 | 2.779 | 7.520 | 0.040 | up |
| ENSGALG00000005352 | GATA5 | 1.741 | 0.100 | −3.805 | 0.035 | down |
| ENSGALG00000028466 | – | 25.225 | 0.238 | −6.447 | 0.001 | down |
| ENSGALG00000031738 | – | 25.402 | 0.039 | −9.023 | 0.015 | down |
| ENSGALG00000032571 | – | 30.003 | 0.063 | −8.337 | 0.000 | down |
| ENSGALG00000034566 | – | 80.952 | 15.109 | −2.177 | 0.002 | down |
| ENSGALG00000035729 | – | 6.291 | 0.000 | −9.192 | 0.001 | down |
| ENSGALG00000036073 | – | 69.579 | 8.444 | −2.707 | 0.040 | down |
| ENSGALG00000037047 | – | 93.344 | 0.122 | −5.938 | 0.015 | down |
| ENSGALG00000038171 | – | 2.003 | 0.000 | −8.145 | 0.000 | down |
| ENSGALG00000038672 | ATPIF1 | 490.705 | 67.789 | −2.582 | 0.004 | down |
| ENSGALG00000041477 | – | 8.870 | 1.560 | −3.665 | 0.015 | down |
| ENSGALG00000042236 | – | 71.365 | 9.786 | −2.826 | 0.001 | down |
| ENSGALG00000043546 | – | 168.164 | 35.154 | −2.041 | 0.015 | down |
| ENSGALG00000045659 | – | 4.881 | 0.078 | −5.774 | 0.009 | down |
EP0, dietary supplementation of Enteromorpha polysaccharides (EP) at 0 mg/kg; EP1000, dietary supplementation of Enteromorpha polysaccharides (EP) at 1000 mg/kg.
FIGURE 1Volcano plot of differentially expressed genes. EP0, dietary supplementation of Enteromorpha polysaccharides (EP) at 0 mg/kg; EP1000, dietary supplementation of Enteromorpha polysaccharides (EP) at 1000 mg/kg; nosig, no significant
FIGURE 2Validation of RNA‐Seq result by qPCR. EP0, dietary supplementation of Enteromorpha polysaccharides (EP) at 0 mg/kg; EP1000, dietary supplementation of Enteromorpha polysaccharides (EP) at 1000 mg/kg
The GO and KEGG enrichment analysis between EP0 and EP1000 groups
| Number | Pathway ID | Pathway description | |
|---|---|---|---|
| GO enrichment analysis | |||
| 1 | GO:0034164 | Negative regulation of toll‐like receptor 9 signaling pathway |
|
| KEGG enrichment analysis | |||
| 1 | map04145 | Phagosome | 0.081 |
| 2 | map04137 | Mitophagy‐animal | 0.081 |
| 3 | map05132 | 0.081 | |
| 4 | map04140 | Autophagy‐animal | 0.081 |
EP0, dietary supplementation of Enteromorpha polysaccharides (EP) at 0 mg/kg; EP1000, dietary supplementation of Enteromorpha polysaccharides (EP) at 1000 mg/kg.
FIGURE 3GO enrichment analysis between EP0 and EP1000 groups. EP0, dietary supplementation of Enteromorpha polysaccharides (EP) at 0 mg/kg; EP1000, dietary supplementation of Enteromorpha polysaccharides (EP) at 1000 mg/kg
FIGURE 4KEGG enrichment analysis between EP0 and EP1000 groups. EP0, dietary supplementation of Enteromorpha polysaccharides (EP) at 0 mg/kg; EP1000, dietary supplementation of Enteromorpha polysaccharides (EP) at 1000 mg/kg