| Literature DB >> 34265163 |
Remya Rajan1,2, Dirk Schepmann1, Ruben Steigerwald1,3, Julian A Schreiber1,4, Ehab El-Awaad1, Joachim Jose1,3, Guiscard Seebohm3,4, Bernhard Wünsch1,2,3.
Abstract
Recent studies have shown the involvement of GluN2A subunit-containing NMDA receptors in various neurological and pathological disorders. In the X-ray crystal structure, TCN-201 (1) and analogous pyrazine derivatives 2 and 3 adopt a U-shape (hairpin) conformation within the binding site formed by the ligand binding domains of the GluN1 and GluN2A subunits. In order to mimic the resulting π/π-interactions of two aromatic rings in the binding site, a [2.2]paracyclophane system was designed to lock these aromatic rings in a parallel orientation. Acylation of [2.2]paracyclophane (5) with oxalyl chloride and chloroacetyl chloride and subsequent transformations led to the oxalamide 7, triazole 10 and benzamides 12. The GluN2A inhibitory activities of the paracyclophane derivatives were tested with two-electrode voltage clamp electrophysiology using Xenopus laevis oocytes expressing selectively functional NMDA receptors with GluN2A subunit. The o-iodobenzamide 12 b with the highest similarity to TCN-201 showed the highest GuN2A inhibitory activity of this series of compounds. At a concentration of 10 μM, 12 b reached 36 % of the inhibitory activity of TCN-201 (1). This result indicates that the [2.2]paracyclophane system is well accepted by the TCN-201 binding site.Entities:
Keywords: GluN2A subunit; NMDA receptor; TCN-201 analogs; [2.2]paracyclophane; antagonists; conformational restriction; preorientation; two-electrode voltage clamp
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Year: 2021 PMID: 34265163 PMCID: PMC8596836 DOI: 10.1002/cmdc.202100400
Source DB: PubMed Journal: ChemMedChem ISSN: 1860-7179 Impact factor: 3.466
Figure 1NAMs selectively inhibiting GluN2A subunit containing NMDA receptors.
Figure 2Selective GluN2A subunit containing NMDA receptor NAM designed by replacing ring A and ring B by the [2.2]paracyclophane system.
Scheme 1Synthesis of racemic oxalyl derivative 7. Reagents and reaction conditions: (a) Oxalyl chloride, AlCl3, CH2Cl2, 0 °C to rt, 4 h, 89 %. (b) N‐Methylbenzylamine, Et3N, 0 °C to rt, 30 min, 24 %.
Scheme 2Synthesis of racemic [2.2]paracyclophane‐based triazole 10 and benzamides 12. Reagents and reaction conditions: (a) Chloroacetyl chloride, AlCl3, CH2Cl2, 0 °C to rt, 4 h, 85 %. (b) NaN3, KI, DMF, rt, 10 h, 99 %. (c) Phenylacetylene, CuSO4 .5H2O, sodium ascorbate, water, rt, 10 min, 86 %. (d) H2, Pd/C, THF:MeOH 1 : 1, rt, 16 h, 86 %. (e) R−C6H4CO2H, COMU, DIPEA, THF, rt, 16 h, 12 a: 88 %; 12 b: 84 %.
Figure 3Normalized inhibition (I) of test compounds with paracyclophane scaffold. The reduced ion flux across the oocyte membrane was measured at a concentration of 10 μM of the test compounds after activation with 10 μM (S)‐glutamate and 10 μM glycine. The inhibition obtained by TCN‐201 (1, 10 μM) was set to 100 % and the inhibition of the test compounds (10 μM) was normalized to this activity (in %). The activity of each compound was measured with three independent oocytes (n=3).